Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 MIR548AY-201ENST00000617669 107 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 U6.73-201ENST00000619194 103 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 AC006435.5-201ENST00000624486 112 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 U6.108-201ENST00000637764 58 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 SNORD114-7-201ENST00000362520 77 ntBASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 Y_RNA.215-201ENST00000364204 112 ntBASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 Y_RNA.291-201ENST00000364886 113 ntBASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 RNU6-81P-201ENST00000365608 104 ntBASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 MIR616-201ENST00000385293 97 ntBASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 RNA5SP465-201ENST00000391195 109 ntBASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 HSPE1P13-201ENST00000451143 297 ntBASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 AC005840.1-201ENST00000498412 377 ntBASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 RNU6-426P-201ENST00000516464 97 ntBASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 RNU6-295P-201ENST00000516901 104 ntBASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 RNU7-172P-201ENST00000517125 64 ntBASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 MIR5094-201ENST00000578766 85 ntBASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 AC005786.1-201ENST00000588553 154 ntBASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 POLR3GP1-201ENST00000594073 261 ntBASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 Y_RNA.778-201ENST00000620203 90 ntBASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 AC012640.5-201ENST00000623897 319 ntBASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 MIR3658-201ENST00000636291 56 ntBASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SLC44A4Q53GD3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.27□□□□□ -2.05
SLC44A4Q53GD3 SNORA16B-201ENST00000364674 135 ntBASIC2.27□□□□□ -2.05
SLC44A4Q53GD3 Y_RNA.343-201ENST00000365354 112 ntBASIC2.27□□□□□ -2.05
SLC44A4Q53GD3 RNA5SP37-201ENST00000365420 130 ntBASIC2.27□□□□□ -2.05
SLC44A4Q53GD3 RNU6-144P-201ENST00000383951 107 ntBASIC2.27□□□□□ -2.05
SLC44A4Q53GD3 Y_RNA.568-201ENST00000384742 113 ntBASIC2.27□□□□□ -2.05
SLC44A4Q53GD3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.27□□□□□ -2.05
SLC44A4Q53GD3 AL606845.1-201ENST00000404881 255 ntBASIC2.27□□□□□ -2.05
SLC44A4Q53GD3 SNORD23.1-201ENST00000408212 104 ntBASIC2.27□□□□□ -2.05
SLC44A4Q53GD3 RNA5SP511-201ENST00000410487 115 ntBASIC2.27□□□□□ -2.05
SLC44A4Q53GD3 RNA5SP501-201ENST00000410990 112 ntBASIC2.27□□□□□ -2.05
SLC44A4Q53GD3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.27□□□□□ -2.05
SLC44A4Q53GD3 AL162725.1-201ENST00000435405 301 ntBASIC2.27□□□□□ -2.05
SLC44A4Q53GD3 AL121914.1-201ENST00000450188 156 ntBASIC2.27□□□□□ -2.05
SLC44A4Q53GD3 RNU7-121P-201ENST00000516604 62 ntBASIC2.27□□□□□ -2.05
SLC44A4Q53GD3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.27□□□□□ -2.05
SLC44A4Q53GD3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.27□□□□□ -2.05
SLC44A4Q53GD3 AP003357.1-201ENST00000604497 148 ntBASIC2.27□□□□□ -2.05
SLC44A4Q53GD3 AC005972.2-201ENST00000604690 348 ntBASIC2.27□□□□□ -2.05
SLC44A4Q53GD3 AP000553.5-201ENST00000641933 54 ntBASIC2.27□□□□□ -2.05
SLC44A4Q53GD3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SLC44A4Q53GD3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SLC44A4Q53GD3 MIR367-201ENST00000362299 68 ntBASIC2.26□□□□□ -2.05
SLC44A4Q53GD3 RNU6-117P-201ENST00000365415 107 ntBASIC2.26□□□□□ -2.05
SLC44A4Q53GD3 U8.13-201ENST00000390842 128 ntBASIC2.26□□□□□ -2.05
SLC44A4Q53GD3 RNA5SP323-201ENST00000391094 133 ntBASIC2.26□□□□□ -2.05
SLC44A4Q53GD3 SNORA26.9-201ENST00000391322 122 ntBASIC2.26□□□□□ -2.05
SLC44A4Q53GD3 CST2P1-201ENST00000425770 87 ntBASIC2.26□□□□□ -2.05
SLC44A4Q53GD3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.26□□□□□ -2.05
SLC44A4Q53GD3 AC007229.1-201ENST00000590455 412 ntBASIC2.26□□□□□ -2.05
SLC44A4Q53GD3 AC073413.2-201ENST00000604332 360 ntBASIC2.26□□□□□ -2.05
SLC44A4Q53GD3 MIR6766-201ENST00000622641 72 ntBASIC2.26□□□□□ -2.05
SLC44A4Q53GD3 AC091895.1-201ENST00000624494 256 ntBASIC2.26□□□□□ -2.05
SLC44A4Q53GD3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.26□□□□□ -2.05
SLC44A4Q53GD3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.26□□□□□ -2.05
SLC44A4Q53GD3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SLC44A4Q53GD3 AC100821.1-201ENST00000523153 2479 ntBASIC2.25□□□□□ -2.05
SLC44A4Q53GD3 RNU4-11P-201ENST00000365287 132 ntBASIC2.25□□□□□ -2.05
SLC44A4Q53GD3 SNORA8-201ENST00000384574 139 ntBASIC2.25□□□□□ -2.05
SLC44A4Q53GD3 MIR569-201ENST00000385228 96 ntBASIC2.25□□□□□ -2.05
SLC44A4Q53GD3 MIR1278-201ENST00000408753 81 ntBASIC2.25□□□□□ -2.05
SLC44A4Q53GD3 RNA5SP247-201ENST00000411181 105 ntBASIC2.25□□□□□ -2.05
SLC44A4Q53GD3 AC006461.1-201ENST00000412637 326 ntBASIC2.25□□□□□ -2.05
SLC44A4Q53GD3 AC055731.1-201ENST00000474387 401 ntBASIC2.25□□□□□ -2.05
SLC44A4Q53GD3 RPL23AP54-201ENST00000495129 419 ntBASIC2.25□□□□□ -2.05
SLC44A4Q53GD3 RNA5SP200-201ENST00000516360 103 ntBASIC2.25□□□□□ -2.05
SLC44A4Q53GD3 RNU2-19P-201ENST00000517288 84 ntBASIC2.25□□□□□ -2.05
SLC44A4Q53GD3 MIR4529-201ENST00000578110 78 ntBASIC2.25□□□□□ -2.05
SLC44A4Q53GD3 MIR4448-201ENST00000584360 86 ntBASIC2.25□□□□□ -2.05
SLC44A4Q53GD3 AC002984.1-201ENST00000591692 448 ntBASIC2.25□□□□□ -2.05
SLC44A4Q53GD3 AL359075.3-201ENST00000613288 217 ntBASIC2.25□□□□□ -2.05
SLC44A4Q53GD3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SLC44A4Q53GD3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.25□□□□□ -2.05
SLC44A4Q53GD3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
SLC44A4Q53GD3 RNA5SP276-201ENST00000362580 94 ntBASIC2.24□□□□□ -2.05
SLC44A4Q53GD3 Y_RNA.140-201ENST00000363474 103 ntBASIC2.24□□□□□ -2.05
SLC44A4Q53GD3 Y_RNA.338-201ENST00000365320 114 ntBASIC2.24□□□□□ -2.05
SLC44A4Q53GD3 RNU6-1323P-201ENST00000384025 107 ntBASIC2.24□□□□□ -2.05
SLC44A4Q53GD3 SNORA20-201ENST00000384662 132 ntBASIC2.24□□□□□ -2.05
SLC44A4Q53GD3 RNU6-376P-201ENST00000384731 106 ntBASIC2.24□□□□□ -2.05
SLC44A4Q53GD3 MIR15B-201ENST00000385045 98 ntBASIC2.24□□□□□ -2.05
SLC44A4Q53GD3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SLC44A4Q53GD3 AC107027.2-201ENST00000512197 115 ntBASIC2.24□□□□□ -2.05
SLC44A4Q53GD3 AC015720.1-201ENST00000565251 277 ntBASIC2.24□□□□□ -2.05
SLC44A4Q53GD3 AC127455.1-201ENST00000565496 145 ntBASIC2.24□□□□□ -2.05
SLC44A4Q53GD3 AL391903.3-201ENST00000612158 163 ntBASIC2.24□□□□□ -2.05
SLC44A4Q53GD3 MIR6132-201ENST00000622083 109 ntBASIC2.24□□□□□ -2.05
SLC44A4Q53GD3 ZNF702P-202ENST00000434269 1966 ntBASIC2.23□□□□□ -2.05
SLC44A4Q53GD3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
SLC44A4Q53GD3 RNU6-257P-201ENST00000410238 98 ntBASIC2.23□□□□□ -2.05
SLC44A4Q53GD3 Y_RNA.622-201ENST00000411091 108 ntBASIC2.23□□□□□ -2.05
SLC44A4Q53GD3 AL445646.1-201ENST00000431784 216 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 285.3 ms