Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 SNORA36B-201ENST00000410438 131 ntBASIC1.69□□□□□ -2.14
CCDC38Q502W7 SNRPGP10-201ENST00000432323 225 ntBASIC1.69□□□□□ -2.14
CCDC38Q502W7 AC093850.1-201ENST00000454121 251 ntBASIC1.69□□□□□ -2.14
CCDC38Q502W7 AC091959.1-201ENST00000495857 238 ntBASIC1.69□□□□□ -2.14
CCDC38Q502W7 RNU6-1338P-201ENST00000516328 91 ntBASIC1.69□□□□□ -2.14
CCDC38Q502W7 RNU6-1116P-201ENST00000517269 99 ntBASIC1.69□□□□□ -2.14
CCDC38Q502W7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CCDC38Q502W7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CCDC38Q502W7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CCDC38Q502W7 RNU6-457P-201ENST00000363999 107 ntBASIC1.68□□□□□ -2.14
CCDC38Q502W7 RNU6-763P-201ENST00000390865 106 ntBASIC1.68□□□□□ -2.14
CCDC38Q502W7 MTCO2P33-201ENST00000402100 465 ntBASIC1.68□□□□□ -2.14
CCDC38Q502W7 MIR548F4-201ENST00000408515 105 ntBASIC1.68□□□□□ -2.14
CCDC38Q502W7 RN7SKP51-201ENST00000410781 304 ntBASIC1.68□□□□□ -2.14
CCDC38Q502W7 MLLT10P1-201ENST00000418346 262 ntBASIC1.68□□□□□ -2.14
CCDC38Q502W7 RNU6-437P-201ENST00000459408 95 ntBASIC1.68□□□□□ -2.14
CCDC38Q502W7 AC092991.1-201ENST00000477176 376 ntBASIC1.68□□□□□ -2.14
CCDC38Q502W7 SERF1AP1-201ENST00000514575 187 ntBASIC1.68□□□□□ -2.14
CCDC38Q502W7 SNORA27.4-201ENST00000516650 95 ntBASIC1.68□□□□□ -2.14
CCDC38Q502W7 RNU6-250P-201ENST00000516958 103 ntBASIC1.68□□□□□ -2.14
CCDC38Q502W7 RNU6-570P-201ENST00000517051 105 ntBASIC1.68□□□□□ -2.14
CCDC38Q502W7 MIR2681-201ENST00000581814 105 ntBASIC1.68□□□□□ -2.14
CCDC38Q502W7 AL513534.2-201ENST00000603836 250 ntBASIC1.68□□□□□ -2.14
CCDC38Q502W7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.68□□□□□ -2.14
CCDC38Q502W7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.68□□□□□ -2.14
CCDC38Q502W7 RNU1-17P-201ENST00000363022 152 ntBASIC1.67□□□□□ -2.14
CCDC38Q502W7 RNU6-674P-201ENST00000363831 107 ntBASIC1.67□□□□□ -2.14
CCDC38Q502W7 SNORA2.2-201ENST00000365473 135 ntBASIC1.67□□□□□ -2.14
CCDC38Q502W7 MIR653-201ENST00000385279 96 ntBASIC1.67□□□□□ -2.14
CCDC38Q502W7 RNU6-131P-201ENST00000391144 107 ntBASIC1.67□□□□□ -2.14
CCDC38Q502W7 AL627390.1-201ENST00000396055 340 ntBASIC1.67□□□□□ -2.14
CCDC38Q502W7 CYCSP49-201ENST00000420810 319 ntBASIC1.67□□□□□ -2.14
CCDC38Q502W7 TRBVB-201ENST00000477100 408 ntBASIC1.67□□□□□ -2.14
CCDC38Q502W7 AC114811.1-201ENST00000507207 168 ntBASIC1.67□□□□□ -2.14
CCDC38Q502W7 SNORA25.15-201ENST00000516487 89 ntBASIC1.67□□□□□ -2.14
CCDC38Q502W7 AL117187.1-201ENST00000555482 181 ntBASIC1.67□□□□□ -2.14
CCDC38Q502W7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.67□□□□□ -2.14
CCDC38Q502W7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC38Q502W7 U6.104-201ENST00000637979 90 ntBASIC1.67□□□□□ -2.14
CCDC38Q502W7 AC134026.1-201ENST00000623249 2239 ntBASIC1.67□□□□□ -2.14
CCDC38Q502W7 RNU6-1272P-201ENST00000362776 107 ntBASIC1.66□□□□□ -2.14
CCDC38Q502W7 RNU6-238P-201ENST00000363313 106 ntBASIC1.66□□□□□ -2.14
CCDC38Q502W7 Y_RNA.376-201ENST00000365638 108 ntBASIC1.66□□□□□ -2.14
CCDC38Q502W7 RNU6-144P-201ENST00000383951 107 ntBASIC1.66□□□□□ -2.14
CCDC38Q502W7 Y_RNA.574-201ENST00000384766 95 ntBASIC1.66□□□□□ -2.14
CCDC38Q502W7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.66□□□□□ -2.14
CCDC38Q502W7 PIGPP3-201ENST00000425307 415 ntBASIC1.66□□□□□ -2.14
CCDC38Q502W7 RPL30P7-201ENST00000479312 323 ntBASIC1.66□□□□□ -2.14
CCDC38Q502W7 AC005357.1-201ENST00000588399 301 ntBASIC1.66□□□□□ -2.14
CCDC38Q502W7 AC136443.5-201ENST00000603741 370 ntBASIC1.66□□□□□ -2.14
CCDC38Q502W7 AL360085.1-201ENST00000604713 532 ntBASIC1.66□□□□□ -2.14
CCDC38Q502W7 AP001485.1-201ENST00000604799 199 ntBASIC1.66□□□□□ -2.14
CCDC38Q502W7 JPX_2.1-201ENST00000614161 69 ntBASIC1.66□□□□□ -2.14
CCDC38Q502W7 MIR8062-201ENST00000621515 85 ntBASIC1.66□□□□□ -2.14
CCDC38Q502W7 UBE2WP1-201ENST00000362030 340 ntBASIC1.65□□□□□ -2.15
CCDC38Q502W7 RNU6-1084P-201ENST00000362498 107 ntBASIC1.65□□□□□ -2.15
CCDC38Q502W7 Y_RNA.176-201ENST00000363815 109 ntBASIC1.65□□□□□ -2.15
CCDC38Q502W7 RNU6-969P-201ENST00000383900 105 ntBASIC1.65□□□□□ -2.15
CCDC38Q502W7 Y_RNA.459-201ENST00000384251 102 ntBASIC1.65□□□□□ -2.15
CCDC38Q502W7 Y_RNA.512-201ENST00000384518 102 ntBASIC1.65□□□□□ -2.15
CCDC38Q502W7 RN7SKP101-201ENST00000411376 320 ntBASIC1.65□□□□□ -2.15
CCDC38Q502W7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC38Q502W7 Y_RNA.637-201ENST00000459424 114 ntBASIC1.65□□□□□ -2.15
CCDC38Q502W7 RNU6-322P-201ENST00000516010 103 ntBASIC1.65□□□□□ -2.15
CCDC38Q502W7 DEFB108E-201ENST00000524692 240 ntBASIC1.65□□□□□ -2.15
CCDC38Q502W7 AL512310.8-201ENST00000550183 120 ntBASIC1.65□□□□□ -2.15
CCDC38Q502W7 AC090049.2-201ENST00000550377 109 ntBASIC1.65□□□□□ -2.15
CCDC38Q502W7 AC008269.2-201ENST00000561915 1105 ntBASIC1.65□□□□□ -2.15
CCDC38Q502W7 AC013791.1-201ENST00000616619 62 ntBASIC1.65□□□□□ -2.15
CCDC38Q502W7 AC007742.2-201ENST00000618226 398 ntBASIC1.65□□□□□ -2.15
CCDC38Q502W7 AP000648.3-201ENST00000623539 4507 ntBASIC1.65□□□□□ -2.15
CCDC38Q502W7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CCDC38Q502W7 RNU6-1205P-201ENST00000363625 106 ntBASIC1.64□□□□□ -2.15
CCDC38Q502W7 Y_RNA.217-201ENST00000364214 105 ntBASIC1.64□□□□□ -2.15
CCDC38Q502W7 snoU2-30.1-201ENST00000365012 70 ntBASIC1.64□□□□□ -2.15
CCDC38Q502W7 RNU6-955P-201ENST00000410497 104 ntBASIC1.64□□□□□ -2.15
CCDC38Q502W7 Y_RNA.641-201ENST00000459414 105 ntBASIC1.64□□□□□ -2.15
CCDC38Q502W7 RNU6-917P-201ENST00000516294 104 ntBASIC1.64□□□□□ -2.15
CCDC38Q502W7 SNORD45.4-201ENST00000516629 73 ntBASIC1.64□□□□□ -2.15
CCDC38Q502W7 SCARNA24.2-201ENST00000516968 130 ntBASIC1.64□□□□□ -2.15
CCDC38Q502W7 MIR3664-201ENST00000579074 99 ntBASIC1.64□□□□□ -2.15
CCDC38Q502W7 AC087685.1-201ENST00000587507 141 ntBASIC1.64□□□□□ -2.15
CCDC38Q502W7 AP001282.2-201ENST00000616149 309 ntBASIC1.64□□□□□ -2.15
CCDC38Q502W7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
CCDC38Q502W7 RNU6-1209P-201ENST00000363655 107 ntBASIC1.63□□□□□ -2.15
CCDC38Q502W7 Y_RNA.796-201ENST00000364268 102 ntBASIC1.63□□□□□ -2.15
CCDC38Q502W7 Y_RNA.799-201ENST00000364992 102 ntBASIC1.63□□□□□ -2.15
CCDC38Q502W7 RNU6-662P-201ENST00000384253 104 ntBASIC1.63□□□□□ -2.15
CCDC38Q502W7 MIR452-201ENST00000385020 85 ntBASIC1.63□□□□□ -2.15
CCDC38Q502W7 AL451046.2-201ENST00000403074 277 ntBASIC1.63□□□□□ -2.15
CCDC38Q502W7 MIR1302-6-201ENST00000408466 90 ntBASIC1.63□□□□□ -2.15
CCDC38Q502W7 HMGN2P32-201ENST00000444648 269 ntBASIC1.63□□□□□ -2.15
CCDC38Q502W7 RNU6-327P-201ENST00000516270 127 ntBASIC1.63□□□□□ -2.15
CCDC38Q502W7 SCARNA15.1-201ENST00000516384 125 ntBASIC1.63□□□□□ -2.15
CCDC38Q502W7 MIR4255-201ENST00000579351 72 ntBASIC1.63□□□□□ -2.15
CCDC38Q502W7 AL391987.6-201ENST00000305671 199 ntBASIC1.62□□□□□ -2.15
CCDC38Q502W7 SNORD50B-201ENST00000364995 70 ntBASIC1.62□□□□□ -2.15
CCDC38Q502W7 RNA5SP190-201ENST00000365222 118 ntBASIC1.62□□□□□ -2.15
CCDC38Q502W7 Y_RNA.338-201ENST00000365320 114 ntBASIC1.62□□□□□ -2.15
CCDC38Q502W7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms