Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AL445193.1-201ENST00000441183 141 ntBASIC-1.56□□□□□ -2.66
CCDC58Q4VC31 RNU7-181P-201ENST00000517234 74 ntBASIC-1.56□□□□□ -2.66
CCDC58Q4VC31 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.56□□□□□ -2.66
CCDC58Q4VC31 U2.17-201ENST00000611454 95 ntBASIC-1.56□□□□□ -2.66
CCDC58Q4VC31 SNORD14E-201ENST00000364009 85 ntBASIC-1.57□□□□□ -2.66
CCDC58Q4VC31 RNU6-740P-201ENST00000364734 105 ntBASIC-1.57□□□□□ -2.66
CCDC58Q4VC31 RNU4-16P-201ENST00000364737 141 ntBASIC-1.57□□□□□ -2.66
CCDC58Q4VC31 RNU6-10P-201ENST00000384036 107 ntBASIC-1.57□□□□□ -2.66
CCDC58Q4VC31 RNU6-74P-201ENST00000384235 107 ntBASIC-1.57□□□□□ -2.66
CCDC58Q4VC31 SNORD38B-201ENST00000384690 67 ntBASIC-1.57□□□□□ -2.66
CCDC58Q4VC31 MIR4280-201ENST00000582178 76 ntBASIC-1.57□□□□□ -2.66
CCDC58Q4VC31 AP000811.1-201ENST00000603803 651 ntBASIC-1.57□□□□□ -2.66
CCDC58Q4VC31 AC064836.2-201ENST00000609491 462 ntBASIC-1.57□□□□□ -2.66
CCDC58Q4VC31 RNU6-726P-201ENST00000364680 107 ntBASIC-1.58□□□□□ -2.66
CCDC58Q4VC31 MIR516B1-201ENST00000385211 90 ntBASIC-1.58□□□□□ -2.66
CCDC58Q4VC31 RNU6-159P-201ENST00000391080 106 ntBASIC-1.58□□□□□ -2.66
CCDC58Q4VC31 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.58□□□□□ -2.66
CCDC58Q4VC31 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.58□□□□□ -2.66
CCDC58Q4VC31 RNU6-86P-201ENST00000606534 107 ntBASIC-1.58□□□□□ -2.66
CCDC58Q4VC31 AC009878.1-201ENST00000621819 340 ntBASIC-1.58□□□□□ -2.66
CCDC58Q4VC31 RNU6-606P-201ENST00000384721 111 ntBASIC-1.59□□□□□ -2.66
CCDC58Q4VC31 MIR587-201ENST00000384845 96 ntBASIC-1.59□□□□□ -2.66
CCDC58Q4VC31 AC104850.1-201ENST00000435940 476 ntBASIC-1.59□□□□□ -2.66
CCDC58Q4VC31 snoU13.2-201ENST00000459201 104 ntBASIC-1.59□□□□□ -2.66
CCDC58Q4VC31 snoU13.11-201ENST00000459219 104 ntBASIC-1.59□□□□□ -2.66
CCDC58Q4VC31 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.59□□□□□ -2.66
CCDC58Q4VC31 AC140658.3-201ENST00000567603 271 ntBASIC-1.59□□□□□ -2.66
CCDC58Q4VC31 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.59□□□□□ -2.66
CCDC58Q4VC31 MIR30D-201ENST00000362283 70 ntBASIC-1.6□□□□□ -2.67
CCDC58Q4VC31 RNU6-324P-201ENST00000363957 106 ntBASIC-1.6□□□□□ -2.67
CCDC58Q4VC31 RNU6-660P-201ENST00000364566 109 ntBASIC-1.6□□□□□ -2.67
CCDC58Q4VC31 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.6□□□□□ -2.67
CCDC58Q4VC31 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.6□□□□□ -2.67
CCDC58Q4VC31 MIR9-2-201ENST00000384838 87 ntBASIC-1.6□□□□□ -2.67
CCDC58Q4VC31 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.6□□□□□ -2.67
CCDC58Q4VC31 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-1.6□□□□□ -2.67
CCDC58Q4VC31 SCARNA18B-201ENST00000458806 135 ntBASIC-1.6□□□□□ -2.67
CCDC58Q4VC31 SNORD38.3-201ENST00000516599 73 ntBASIC-1.6□□□□□ -2.67
CCDC58Q4VC31 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.6□□□□□ -2.67
CCDC58Q4VC31 UBL5P4-201ENST00000562584 236 ntBASIC-1.6□□□□□ -2.67
CCDC58Q4VC31 MIR4306-201ENST00000583390 91 ntBASIC-1.6□□□□□ -2.67
CCDC58Q4VC31 PIGPP4-201ENST00000584447 307 ntBASIC-1.6□□□□□ -2.67
CCDC58Q4VC31 AC005828.6-201ENST00000606610 232 ntBASIC-1.6□□□□□ -2.67
CCDC58Q4VC31 AC099654.13-201ENST00000639774 207 ntBASIC-1.6□□□□□ -2.67
CCDC58Q4VC31 SNORD56B-201ENST00000384713 71 ntBASIC-1.61□□□□□ -2.67
CCDC58Q4VC31 MT-TY-201ENST00000387409 66 ntBASIC-1.61□□□□□ -2.67
CCDC58Q4VC31 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.61□□□□□ -2.67
CCDC58Q4VC31 GPR143P-201ENST00000434155 205 ntBASIC-1.61□□□□□ -2.67
CCDC58Q4VC31 AC108059.2-201ENST00000434626 151 ntBASIC-1.61□□□□□ -2.67
CCDC58Q4VC31 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.61□□□□□ -2.67
CCDC58Q4VC31 AC072046.2-201ENST00000618366 268 ntBASIC-1.61□□□□□ -2.67
CCDC58Q4VC31 U6.115-201ENST00000636045 103 ntBASIC-1.61□□□□□ -2.67
CCDC58Q4VC31 Y_RNA.18-201ENST00000362461 102 ntBASIC-1.62□□□□□ -2.67
CCDC58Q4VC31 SNORD114-7-201ENST00000362520 77 ntBASIC-1.62□□□□□ -2.67
CCDC58Q4VC31 RNU6-30P-201ENST00000384561 107 ntBASIC-1.62□□□□□ -2.67
CCDC58Q4VC31 MIR521-1-201ENST00000384902 87 ntBASIC-1.62□□□□□ -2.67
CCDC58Q4VC31 AL590002.1-201ENST00000406554 418 ntBASIC-1.62□□□□□ -2.67
CCDC58Q4VC31 SNORD93-201ENST00000408813 74 ntBASIC-1.62□□□□□ -2.67
CCDC58Q4VC31 BX276092.1-201ENST00000427368 251 ntBASIC-1.62□□□□□ -2.67
CCDC58Q4VC31 snoU13.19-201ENST00000459148 104 ntBASIC-1.62□□□□□ -2.67
CCDC58Q4VC31 RPL7P42-201ENST00000481005 679 ntBASIC-1.62□□□□□ -2.67
CCDC58Q4VC31 SNORA25.10-201ENST00000515926 124 ntBASIC-1.62□□□□□ -2.67
CCDC58Q4VC31 AC022616.4-201ENST00000522985 181 ntBASIC-1.62□□□□□ -2.67
CCDC58Q4VC31 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.62□□□□□ -2.67
CCDC58Q4VC31 AL133173.2-201ENST00000614270 90 ntBASIC-1.62□□□□□ -2.67
CCDC58Q4VC31 MIR6851-201ENST00000617060 67 ntBASIC-1.62□□□□□ -2.67
CCDC58Q4VC31 AC009248.2-201ENST00000619826 254 ntBASIC-1.62□□□□□ -2.67
CCDC58Q4VC31 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.63□□□□□ -2.67
CCDC58Q4VC31 RNU5F-6P-201ENST00000362979 116 ntBASIC-1.63□□□□□ -2.67
CCDC58Q4VC31 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.63□□□□□ -2.67
CCDC58Q4VC31 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.63□□□□□ -2.67
CCDC58Q4VC31 RNU6-541P-201ENST00000384709 110 ntBASIC-1.63□□□□□ -2.67
CCDC58Q4VC31 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.63□□□□□ -2.67
CCDC58Q4VC31 Z82188.1-201ENST00000436709 154 ntBASIC-1.63□□□□□ -2.67
CCDC58Q4VC31 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.63□□□□□ -2.67
CCDC58Q4VC31 SNORA13-201ENST00000458790 133 ntBASIC-1.63□□□□□ -2.67
CCDC58Q4VC31 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.63□□□□□ -2.67
CCDC58Q4VC31 RNU6-276P-201ENST00000516114 96 ntBASIC-1.63□□□□□ -2.67
CCDC58Q4VC31 Vault.3-201ENST00000516676 95 ntBASIC-1.63□□□□□ -2.67
CCDC58Q4VC31 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.63□□□□□ -2.67
CCDC58Q4VC31 AC011458.1-201ENST00000604034 617 ntBASIC-1.63□□□□□ -2.67
CCDC58Q4VC31 RNU6-502P-201ENST00000362419 108 ntBASIC-1.64□□□□□ -2.67
CCDC58Q4VC31 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.64□□□□□ -2.67
CCDC58Q4VC31 RNA5SP192-201ENST00000364404 120 ntBASIC-1.64□□□□□ -2.67
CCDC58Q4VC31 AC236972.2-201ENST00000434979 310 ntBASIC-1.64□□□□□ -2.67
CCDC58Q4VC31 U8.19-201ENST00000459095 133 ntBASIC-1.64□□□□□ -2.67
CCDC58Q4VC31 U8.22-201ENST00000459141 133 ntBASIC-1.64□□□□□ -2.67
CCDC58Q4VC31 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.64□□□□□ -2.67
CCDC58Q4VC31 HSPE1P23-201ENST00000509838 286 ntBASIC-1.64□□□□□ -2.67
CCDC58Q4VC31 SNORA25.13-201ENST00000516395 103 ntBASIC-1.64□□□□□ -2.67
CCDC58Q4VC31 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.64□□□□□ -2.67
CCDC58Q4VC31 AC104576.1-201ENST00000524225 88 ntBASIC-1.64□□□□□ -2.67
CCDC58Q4VC31 MIR3165-201ENST00000579874 75 ntBASIC-1.64□□□□□ -2.67
CCDC58Q4VC31 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.64□□□□□ -2.67
CCDC58Q4VC31 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.64□□□□□ -2.67
CCDC58Q4VC31 MTND5P18-201ENST00000445624 1801 ntBASIC-1.64□□□□□ -2.67
CCDC58Q4VC31 SNORD115-44-201ENST00000365391 82 ntBASIC-1.65□□□□□ -2.67
CCDC58Q4VC31 RNU6-291P-201ENST00000384720 107 ntBASIC-1.65□□□□□ -2.67
CCDC58Q4VC31 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.65□□□□□ -2.67
CCDC58Q4VC31 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.65□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms