Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.07□□□□□ -2.24
SHROOM1Q2M3G4 DEFB117-201ENST00000602356 141 ntBASIC1.07□□□□□ -2.24
SHROOM1Q2M3G4 GHRLOS.1-201ENST00000610995 70 ntBASIC1.07□□□□□ -2.24
SHROOM1Q2M3G4 AL606534.2-204ENST00000635008 178 ntBASIC1.07□□□□□ -2.24
SHROOM1Q2M3G4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
SHROOM1Q2M3G4 SNORD114-7-201ENST00000362520 77 ntBASIC1.06□□□□□ -2.24
SHROOM1Q2M3G4 Y_RNA.143-201ENST00000363520 106 ntBASIC1.06□□□□□ -2.24
SHROOM1Q2M3G4 Y_RNA.252-201ENST00000364556 101 ntBASIC1.06□□□□□ -2.24
SHROOM1Q2M3G4 Y_RNA.570-201ENST00000384750 101 ntBASIC1.06□□□□□ -2.24
SHROOM1Q2M3G4 AL590004.1-201ENST00000405321 300 ntBASIC1.06□□□□□ -2.24
SHROOM1Q2M3G4 AC090049.2-201ENST00000550377 109 ntBASIC1.06□□□□□ -2.24
SHROOM1Q2M3G4 CYP3A137P-201ENST00000562436 69 ntBASIC1.06□□□□□ -2.24
SHROOM1Q2M3G4 AC120024.3-201ENST00000603167 156 ntBASIC1.06□□□□□ -2.24
SHROOM1Q2M3G4 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.06□□□□□ -2.24
SHROOM1Q2M3G4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.06□□□□□ -2.24
SHROOM1Q2M3G4 Y_RNA.230-201ENST00000364348 109 ntBASIC1.05□□□□□ -2.24
SHROOM1Q2M3G4 SNORA2.2-201ENST00000365473 135 ntBASIC1.05□□□□□ -2.24
SHROOM1Q2M3G4 MIR653-201ENST00000385279 96 ntBASIC1.05□□□□□ -2.24
SHROOM1Q2M3G4 RNU6-910P-201ENST00000390844 107 ntBASIC1.05□□□□□ -2.24
SHROOM1Q2M3G4 MIR891A-201ENST00000401237 79 ntBASIC1.05□□□□□ -2.24
SHROOM1Q2M3G4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.05□□□□□ -2.24
SHROOM1Q2M3G4 AL390729.2-201ENST00000416137 156 ntBASIC1.05□□□□□ -2.24
SHROOM1Q2M3G4 MCFD2P1-201ENST00000417812 300 ntBASIC1.05□□□□□ -2.24
SHROOM1Q2M3G4 RPS20P10-201ENST00000451209 253 ntBASIC1.05□□□□□ -2.24
SHROOM1Q2M3G4 AC010655.3-201ENST00000478818 450 ntBASIC1.05□□□□□ -2.24
SHROOM1Q2M3G4 SNORA31.4-201ENST00000516049 129 ntBASIC1.05□□□□□ -2.24
SHROOM1Q2M3G4 Y_RNA.772-201ENST00000606692 102 ntBASIC1.05□□□□□ -2.24
SHROOM1Q2M3G4 AL008636.1-201ENST00000625038 1018 ntBASIC1.05□□□□□ -2.24
SHROOM1Q2M3G4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.05□□□□□ -2.24
SHROOM1Q2M3G4 SNORD81.1-201ENST00000363064 77 ntBASIC1.04□□□□□ -2.24
SHROOM1Q2M3G4 MIR516B2-201ENST00000385190 85 ntBASIC1.04□□□□□ -2.24
SHROOM1Q2M3G4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SHROOM1Q2M3G4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.04□□□□□ -2.24
SHROOM1Q2M3G4 MTATP6P23-201ENST00000440153 476 ntBASIC1.04□□□□□ -2.24
SHROOM1Q2M3G4 AC005042.3-201ENST00000453230 174 ntBASIC1.04□□□□□ -2.24
SHROOM1Q2M3G4 RNU6-322P-201ENST00000516010 103 ntBASIC1.04□□□□□ -2.24
SHROOM1Q2M3G4 RNU6-976P-201ENST00000516086 111 ntBASIC1.04□□□□□ -2.24
SHROOM1Q2M3G4 AL358944.1-201ENST00000528537 144 ntBASIC1.04□□□□□ -2.24
SHROOM1Q2M3G4 FAM71BP1-201ENST00000604431 523 ntBASIC1.04□□□□□ -2.24
SHROOM1Q2M3G4 AC005972.2-201ENST00000604690 348 ntBASIC1.04□□□□□ -2.24
SHROOM1Q2M3G4 AC011373.1-201ENST00000607270 237 ntBASIC1.04□□□□□ -2.24
SHROOM1Q2M3G4 Y_RNA.197-201ENST00000364004 102 ntBASIC1.03□□□□□ -2.24
SHROOM1Q2M3G4 Y_RNA.253-201ENST00000364562 112 ntBASIC1.03□□□□□ -2.24
SHROOM1Q2M3G4 Y_RNA.471-201ENST00000384312 102 ntBASIC1.03□□□□□ -2.24
SHROOM1Q2M3G4 SNORD12-201ENST00000391002 90 ntBASIC1.03□□□□□ -2.24
SHROOM1Q2M3G4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.03□□□□□ -2.24
SHROOM1Q2M3G4 RNU6-1132P-201ENST00000459214 107 ntBASIC1.03□□□□□ -2.24
SHROOM1Q2M3G4 CYCTP-201ENST00000504253 315 ntBASIC1.03□□□□□ -2.24
SHROOM1Q2M3G4 SNORA70.22-201ENST00000517160 124 ntBASIC1.03□□□□□ -2.24
SHROOM1Q2M3G4 AL080274.1-201ENST00000605565 220 ntBASIC1.03□□□□□ -2.24
SHROOM1Q2M3G4 MIR6857-201ENST00000613267 93 ntBASIC1.03□□□□□ -2.24
SHROOM1Q2M3G4 RNU6-1084P-201ENST00000362498 107 ntBASIC1.02□□□□□ -2.25
SHROOM1Q2M3G4 Y_RNA.31-201ENST00000362574 102 ntBASIC1.02□□□□□ -2.25
SHROOM1Q2M3G4 Y_RNA.341-201ENST00000365341 102 ntBASIC1.02□□□□□ -2.25
SHROOM1Q2M3G4 Y_RNA.439-201ENST00000384119 94 ntBASIC1.02□□□□□ -2.25
SHROOM1Q2M3G4 RNU6-1105P-201ENST00000384774 107 ntBASIC1.02□□□□□ -2.25
SHROOM1Q2M3G4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.02□□□□□ -2.25
SHROOM1Q2M3G4 AC040926.1-201ENST00000530195 238 ntBASIC1.02□□□□□ -2.25
SHROOM1Q2M3G4 PART1_1.1-201ENST00000611761 217 ntBASIC1.02□□□□□ -2.25
SHROOM1Q2M3G4 AC010205.1-201ENST00000616668 449 ntBASIC1.02□□□□□ -2.25
SHROOM1Q2M3G4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
SHROOM1Q2M3G4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
SHROOM1Q2M3G4 Y_RNA.36-201ENST00000362602 112 ntBASIC1.01□□□□□ -2.25
SHROOM1Q2M3G4 RNU6-833P-201ENST00000363486 107 ntBASIC1.01□□□□□ -2.25
SHROOM1Q2M3G4 Y_RNA.286-201ENST00000364813 102 ntBASIC1.01□□□□□ -2.25
SHROOM1Q2M3G4 RNU1-115P-201ENST00000365329 160 ntBASIC1.01□□□□□ -2.25
SHROOM1Q2M3G4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.01□□□□□ -2.25
SHROOM1Q2M3G4 MIR1298-201ENST00000408783 112 ntBASIC1.01□□□□□ -2.25
SHROOM1Q2M3G4 RNU6-130P-201ENST00000411112 103 ntBASIC1.01□□□□□ -2.25
SHROOM1Q2M3G4 RNU2-64P-201ENST00000411315 191 ntBASIC1.01□□□□□ -2.25
SHROOM1Q2M3G4 MTND4LP11-201ENST00000422184 280 ntBASIC1.01□□□□□ -2.25
SHROOM1Q2M3G4 RPL39P28-201ENST00000465655 155 ntBASIC1.01□□□□□ -2.25
SHROOM1Q2M3G4 AC117454.1-201ENST00000491120 168 ntBASIC1.01□□□□□ -2.25
SHROOM1Q2M3G4 RNU6-397P-201ENST00000516226 104 ntBASIC1.01□□□□□ -2.25
SHROOM1Q2M3G4 RNU6-1046P-201ENST00000516538 107 ntBASIC1.01□□□□□ -2.25
SHROOM1Q2M3G4 SNORA40.14-201ENST00000516543 86 ntBASIC1.01□□□□□ -2.25
SHROOM1Q2M3G4 MIR4714-201ENST00000580728 77 ntBASIC1.01□□□□□ -2.25
SHROOM1Q2M3G4 MIR4423-201ENST00000580922 80 ntBASIC1.01□□□□□ -2.25
SHROOM1Q2M3G4 AL121655.1-201ENST00000605811 308 ntBASIC1.01□□□□□ -2.25
SHROOM1Q2M3G4 AL096861.1-201ENST00000610899 123 ntBASIC1.01□□□□□ -2.25
SHROOM1Q2M3G4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.01□□□□□ -2.25
SHROOM1Q2M3G4 uc_338.22-201ENST00000622722 187 ntBASIC1.01□□□□□ -2.25
SHROOM1Q2M3G4 RNU6-1048P-201ENST00000364054 107 ntBASIC1□□□□□ -2.25
SHROOM1Q2M3G4 RNU1-36P-201ENST00000365130 165 ntBASIC1□□□□□ -2.25
SHROOM1Q2M3G4 RNU6-21P-201ENST00000384710 107 ntBASIC1□□□□□ -2.25
SHROOM1Q2M3G4 MIR19B1-201ENST00000384829 87 ntBASIC1□□□□□ -2.25
SHROOM1Q2M3G4 MIR522-201ENST00000385071 87 ntBASIC1□□□□□ -2.25
SHROOM1Q2M3G4 MT-TD-201ENST00000387419 68 ntBASIC1□□□□□ -2.25
SHROOM1Q2M3G4 U8.20-201ENST00000459445 131 ntBASIC1□□□□□ -2.25
SHROOM1Q2M3G4 POLR3GP1-201ENST00000594073 261 ntBASIC1□□□□□ -2.25
SHROOM1Q2M3G4 MIR6779-201ENST00000617283 64 ntBASIC1□□□□□ -2.25
SHROOM1Q2M3G4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1□□□□□ -2.25
SHROOM1Q2M3G4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1□□□□□ -2.25
SHROOM1Q2M3G4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1□□□□□ -2.25
SHROOM1Q2M3G4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
SHROOM1Q2M3G4 RNU6-450P-201ENST00000364654 107 ntBASIC0.99□□□□□ -2.25
SHROOM1Q2M3G4 SNORD50B-201ENST00000364995 70 ntBASIC0.99□□□□□ -2.25
SHROOM1Q2M3G4 SNORD14.1-201ENST00000365609 90 ntBASIC0.99□□□□□ -2.25
SHROOM1Q2M3G4 SNRPGP10-201ENST00000432323 225 ntBASIC0.99□□□□□ -2.25
SHROOM1Q2M3G4 AC245047.7-201ENST00000440265 293 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 239.5 ms