Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 MIR520G-201ENST00000385064 90 ntBASIC1.73□□□□□ -2.13
PDS5AQ29RF7 AL512604.1-201ENST00000404812 257 ntBASIC1.73□□□□□ -2.13
PDS5AQ29RF7 AC004965.1-201ENST00000413033 213 ntBASIC1.73□□□□□ -2.13
PDS5AQ29RF7 HSPE1P21-201ENST00000438283 308 ntBASIC1.73□□□□□ -2.13
PDS5AQ29RF7 AC104332.1-201ENST00000440471 797 ntBASIC1.73□□□□□ -2.13
PDS5AQ29RF7 AC069257.2-201ENST00000441819 155 ntBASIC1.73□□□□□ -2.13
PDS5AQ29RF7 RNU7-141P-201ENST00000459304 62 ntBASIC1.73□□□□□ -2.13
PDS5AQ29RF7 RNU7-116P-201ENST00000516940 62 ntBASIC1.73□□□□□ -2.13
PDS5AQ29RF7 RNU6-341P-201ENST00000516973 96 ntBASIC1.73□□□□□ -2.13
PDS5AQ29RF7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.73□□□□□ -2.13
PDS5AQ29RF7 AP003357.1-201ENST00000604497 148 ntBASIC1.73□□□□□ -2.13
PDS5AQ29RF7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.73□□□□□ -2.13
PDS5AQ29RF7 MIR6079-201ENST00000635807 62 ntBASIC1.73□□□□□ -2.13
PDS5AQ29RF7 AC068647.2-201ENST00000637380 353 ntBASIC1.73□□□□□ -2.13
PDS5AQ29RF7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PDS5AQ29RF7 Y_RNA.76-201ENST00000362931 109 ntBASIC1.72□□□□□ -2.13
PDS5AQ29RF7 RNY1P10-201ENST00000363268 113 ntBASIC1.72□□□□□ -2.13
PDS5AQ29RF7 RNU6-112P-201ENST00000363599 104 ntBASIC1.72□□□□□ -2.13
PDS5AQ29RF7 RNU6-1048P-201ENST00000364054 107 ntBASIC1.72□□□□□ -2.13
PDS5AQ29RF7 SNORA63D-201ENST00000364359 132 ntBASIC1.72□□□□□ -2.13
PDS5AQ29RF7 RNU6-211P-201ENST00000384047 107 ntBASIC1.72□□□□□ -2.13
PDS5AQ29RF7 MIR562-201ENST00000384894 95 ntBASIC1.72□□□□□ -2.13
PDS5AQ29RF7 RNA5SP212-201ENST00000391223 107 ntBASIC1.72□□□□□ -2.13
PDS5AQ29RF7 Y_RNA.590-201ENST00000410140 107 ntBASIC1.72□□□□□ -2.13
PDS5AQ29RF7 RPS4XP11-201ENST00000446897 772 ntBASIC1.72□□□□□ -2.13
PDS5AQ29RF7 RPS27P1-201ENST00000450552 247 ntBASIC1.72□□□□□ -2.13
PDS5AQ29RF7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.72□□□□□ -2.13
PDS5AQ29RF7 RNU6-111P-201ENST00000517179 105 ntBASIC1.72□□□□□ -2.13
PDS5AQ29RF7 MIR5692C2-201ENST00000577959 77 ntBASIC1.72□□□□□ -2.13
PDS5AQ29RF7 MIR3671-201ENST00000580455 88 ntBASIC1.72□□□□□ -2.13
PDS5AQ29RF7 POLR3GP1-201ENST00000594073 261 ntBASIC1.72□□□□□ -2.13
PDS5AQ29RF7 AC022217.4-201ENST00000604389 163 ntBASIC1.72□□□□□ -2.13
PDS5AQ29RF7 AL008718.3-201ENST00000610217 321 ntBASIC1.72□□□□□ -2.13
PDS5AQ29RF7 AC013791.1-201ENST00000616619 62 ntBASIC1.72□□□□□ -2.13
PDS5AQ29RF7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.72□□□□□ -2.13
PDS5AQ29RF7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.72□□□□□ -2.13
PDS5AQ29RF7 AC134026.1-201ENST00000623249 2239 ntBASIC1.72□□□□□ -2.13
PDS5AQ29RF7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.71□□□□□ -2.13
PDS5AQ29RF7 SNORA7.1-201ENST00000363750 139 ntBASIC1.71□□□□□ -2.14
PDS5AQ29RF7 RNY1-201ENST00000364228 113 ntBASIC1.71□□□□□ -2.14
PDS5AQ29RF7 RNU6-392P-201ENST00000364926 101 ntBASIC1.71□□□□□ -2.14
PDS5AQ29RF7 RNU6-338P-201ENST00000383888 105 ntBASIC1.71□□□□□ -2.14
PDS5AQ29RF7 RNU6-296P-201ENST00000384608 107 ntBASIC1.71□□□□□ -2.14
PDS5AQ29RF7 RNA5SP100-201ENST00000410903 110 ntBASIC1.71□□□□□ -2.14
PDS5AQ29RF7 RNA5SP59-201ENST00000410922 110 ntBASIC1.71□□□□□ -2.14
PDS5AQ29RF7 AC091021.1-201ENST00000468051 388 ntBASIC1.71□□□□□ -2.14
PDS5AQ29RF7 AC117454.1-201ENST00000491120 168 ntBASIC1.71□□□□□ -2.14
PDS5AQ29RF7 RNU4-71P-201ENST00000516258 113 ntBASIC1.71□□□□□ -2.14
PDS5AQ29RF7 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.71□□□□□ -2.14
PDS5AQ29RF7 AL358944.1-201ENST00000528537 144 ntBASIC1.71□□□□□ -2.14
PDS5AQ29RF7 AC024405.2-202ENST00000532731 184 ntBASIC1.71□□□□□ -2.14
PDS5AQ29RF7 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.71□□□□□ -2.14
PDS5AQ29RF7 AC073349.3-201ENST00000617616 186 ntBASIC1.71□□□□□ -2.14
PDS5AQ29RF7 AC141273.2-201ENST00000618989 130 ntBASIC1.71□□□□□ -2.14
PDS5AQ29RF7 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.71□□□□□ -2.14
PDS5AQ29RF7 AC008555.8-201ENST00000623602 2168 ntBASIC1.71□□□□□ -2.14
PDS5AQ29RF7 Y_RNA.65-201ENST00000362846 100 ntBASIC1.7□□□□□ -2.14
PDS5AQ29RF7 Y_RNA.269-201ENST00000364685 89 ntBASIC1.7□□□□□ -2.14
PDS5AQ29RF7 RNU6-144P-201ENST00000383951 107 ntBASIC1.7□□□□□ -2.14
PDS5AQ29RF7 SNORA72-201ENST00000384339 132 ntBASIC1.7□□□□□ -2.14
PDS5AQ29RF7 RNU6-997P-201ENST00000384725 107 ntBASIC1.7□□□□□ -2.14
PDS5AQ29RF7 MIR520A-201ENST00000384862 85 ntBASIC1.7□□□□□ -2.14
PDS5AQ29RF7 MTCO2P33-201ENST00000402100 465 ntBASIC1.7□□□□□ -2.14
PDS5AQ29RF7 AL158823.1-201ENST00000418441 478 ntBASIC1.7□□□□□ -2.14
PDS5AQ29RF7 BTF3P11-201ENST00000426582 477 ntBASIC1.7□□□□□ -2.14
PDS5AQ29RF7 AL606517.2-201ENST00000442855 241 ntBASIC1.7□□□□□ -2.14
PDS5AQ29RF7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.7□□□□□ -2.14
PDS5AQ29RF7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.7□□□□□ -2.14
PDS5AQ29RF7 Y_RNA.679-201ENST00000516416 91 ntBASIC1.7□□□□□ -2.14
PDS5AQ29RF7 RNU6-1096P-201ENST00000517089 102 ntBASIC1.7□□□□□ -2.14
PDS5AQ29RF7 AC011921.3-201ENST00000605540 361 ntBASIC1.7□□□□□ -2.14
PDS5AQ29RF7 MIR548AY-201ENST00000617669 107 ntBASIC1.7□□□□□ -2.14
PDS5AQ29RF7 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.7□□□□□ -2.14
PDS5AQ29RF7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
PDS5AQ29RF7 AC100821.1-201ENST00000523153 2479 ntBASIC1.7□□□□□ -2.14
PDS5AQ29RF7 Y_RNA.292-201ENST00000364904 97 ntBASIC1.69□□□□□ -2.14
PDS5AQ29RF7 RNY4P28-201ENST00000365281 93 ntBASIC1.69□□□□□ -2.14
PDS5AQ29RF7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
PDS5AQ29RF7 SNORA36B-201ENST00000410438 131 ntBASIC1.69□□□□□ -2.14
PDS5AQ29RF7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.69□□□□□ -2.14
PDS5AQ29RF7 AC005840.1-201ENST00000498412 377 ntBASIC1.69□□□□□ -2.14
PDS5AQ29RF7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.69□□□□□ -2.14
PDS5AQ29RF7 AC127455.1-201ENST00000565496 145 ntBASIC1.69□□□□□ -2.14
PDS5AQ29RF7 MIR4299-201ENST00000577899 72 ntBASIC1.69□□□□□ -2.14
PDS5AQ29RF7 AC005357.1-201ENST00000588399 301 ntBASIC1.69□□□□□ -2.14
PDS5AQ29RF7 AL442067.1-201ENST00000613261 223 ntBASIC1.69□□□□□ -2.14
PDS5AQ29RF7 AL773524.1-201ENST00000614065 229 ntBASIC1.69□□□□□ -2.14
PDS5AQ29RF7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
PDS5AQ29RF7 RNU6-674P-201ENST00000363831 107 ntBASIC1.68□□□□□ -2.14
PDS5AQ29RF7 RNA5SP109-201ENST00000391010 116 ntBASIC1.68□□□□□ -2.14
PDS5AQ29RF7 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.68□□□□□ -2.14
PDS5AQ29RF7 COX6CP14-201ENST00000469580 174 ntBASIC1.68□□□□□ -2.14
PDS5AQ29RF7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.68□□□□□ -2.14
PDS5AQ29RF7 RNU6-388P-201ENST00000517012 105 ntBASIC1.68□□□□□ -2.14
PDS5AQ29RF7 RNU6-389P-201ENST00000517048 105 ntBASIC1.68□□□□□ -2.14
PDS5AQ29RF7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.68□□□□□ -2.14
PDS5AQ29RF7 AC011604.1-201ENST00000545978 196 ntBASIC1.68□□□□□ -2.14
PDS5AQ29RF7 MIR5688-201ENST00000580619 83 ntBASIC1.68□□□□□ -2.14
PDS5AQ29RF7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.68□□□□□ -2.14
PDS5AQ29RF7 MIR3660-201ENST00000584845 100 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms