Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 SNORD115-8-201ENST00000363856 82 ntBASIC-1.72□□□□□ -2.68
HMGN3Q15651 SNORD115-38-201ENST00000365037 82 ntBASIC-1.72□□□□□ -2.68
HMGN3Q15651 SNORD73A-201ENST00000386062 65 ntBASIC-1.72□□□□□ -2.68
HMGN3Q15651 SNORD12C-201ENST00000386307 89 ntBASIC-1.72□□□□□ -2.68
HMGN3Q15651 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.72□□□□□ -2.68
HMGN3Q15651 MTATP6P18-201ENST00000417994 673 ntBASIC-1.72□□□□□ -2.68
HMGN3Q15651 MTCO2P29-201ENST00000465212 189 ntBASIC-1.72□□□□□ -2.68
HMGN3Q15651 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.72□□□□□ -2.68
HMGN3Q15651 MIR3684-201ENST00000579779 74 ntBASIC-1.72□□□□□ -2.68
HMGN3Q15651 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.72□□□□□ -2.68
HMGN3Q15651 AC006927.2-201ENST00000639256 389 ntBASIC-1.72□□□□□ -2.68
HMGN3Q15651 AL596211.1-201ENST00000569873 2277 ntBASIC-1.73□□□□□ -2.69
HMGN3Q15651 Y_RNA.167-201ENST00000363735 109 ntBASIC-1.73□□□□□ -2.69
HMGN3Q15651 RNU6-30P-201ENST00000384561 107 ntBASIC-1.73□□□□□ -2.69
HMGN3Q15651 UQCRBP2-201ENST00000447827 297 ntBASIC-1.73□□□□□ -2.69
HMGN3Q15651 AC079140.5-201ENST00000507882 310 ntBASIC-1.73□□□□□ -2.69
HMGN3Q15651 AC131281.1-201ENST00000522984 164 ntBASIC-1.73□□□□□ -2.69
HMGN3Q15651 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.73□□□□□ -2.69
HMGN3Q15651 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.73□□□□□ -2.69
HMGN3Q15651 AC072046.2-201ENST00000618366 268 ntBASIC-1.73□□□□□ -2.69
HMGN3Q15651 Z97988.1-201ENST00000637697 135 ntBASIC-1.73□□□□□ -2.69
HMGN3Q15651 SNORA63.5-201ENST00000363548 123 ntBASIC-1.74□□□□□ -2.69
HMGN3Q15651 RNU6-434P-201ENST00000384376 107 ntBASIC-1.74□□□□□ -2.69
HMGN3Q15651 MIR517B-201ENST00000385102 67 ntBASIC-1.74□□□□□ -2.69
HMGN3Q15651 SNORD70.1-201ENST00000391007 85 ntBASIC-1.74□□□□□ -2.69
HMGN3Q15651 RNA5SP484-201ENST00000458857 111 ntBASIC-1.74□□□□□ -2.69
HMGN3Q15651 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.74□□□□□ -2.69
HMGN3Q15651 RNU6-1028P-201ENST00000517164 93 ntBASIC-1.74□□□□□ -2.69
HMGN3Q15651 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.74□□□□□ -2.69
HMGN3Q15651 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.74□□□□□ -2.69
HMGN3Q15651 MIR4324-201ENST00000584846 72 ntBASIC-1.74□□□□□ -2.69
HMGN3Q15651 AC011458.1-201ENST00000604034 617 ntBASIC-1.74□□□□□ -2.69
HMGN3Q15651 SNORD115-44-201ENST00000365391 82 ntBASIC-1.75□□□□□ -2.69
HMGN3Q15651 RNU6-809P-201ENST00000384461 107 ntBASIC-1.75□□□□□ -2.69
HMGN3Q15651 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.75□□□□□ -2.69
HMGN3Q15651 RNU7-67P-201ENST00000459003 62 ntBASIC-1.75□□□□□ -2.69
HMGN3Q15651 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.75□□□□□ -2.69
HMGN3Q15651 AC090616.2-202ENST00000584248 222 ntBASIC-1.75□□□□□ -2.69
HMGN3Q15651 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.75□□□□□ -2.69
HMGN3Q15651 AL136370.1-201ENST00000608166 691 ntBASIC-1.75□□□□□ -2.69
HMGN3Q15651 AL049777.1-201ENST00000622740 518 ntBASIC-1.75□□□□□ -2.69
HMGN3Q15651 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.76□□□□□ -2.69
HMGN3Q15651 RNU4-16P-201ENST00000364737 141 ntBASIC-1.76□□□□□ -2.69
HMGN3Q15651 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.76□□□□□ -2.69
HMGN3Q15651 RNU6-24P-201ENST00000384440 107 ntBASIC-1.76□□□□□ -2.69
HMGN3Q15651 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.76□□□□□ -2.69
HMGN3Q15651 RNU6-602P-201ENST00000411155 105 ntBASIC-1.76□□□□□ -2.69
HMGN3Q15651 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.76□□□□□ -2.69
HMGN3Q15651 RNU6-334P-201ENST00000517072 102 ntBASIC-1.76□□□□□ -2.69
HMGN3Q15651 RNU7-161P-201ENST00000517289 62 ntBASIC-1.76□□□□□ -2.69
HMGN3Q15651 AC024405.2-202ENST00000532731 184 ntBASIC-1.76□□□□□ -2.69
HMGN3Q15651 MIR4491-201ENST00000581087 68 ntBASIC-1.76□□□□□ -2.69
HMGN3Q15651 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.76□□□□□ -2.69
HMGN3Q15651 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.77□□□□□ -2.69
HMGN3Q15651 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.77□□□□□ -2.69
HMGN3Q15651 RNU6-10P-201ENST00000384036 107 ntBASIC-1.77□□□□□ -2.69
HMGN3Q15651 SNORA24-201ENST00000384096 131 ntBASIC-1.77□□□□□ -2.69
HMGN3Q15651 RNU6-784P-201ENST00000384330 106 ntBASIC-1.77□□□□□ -2.69
HMGN3Q15651 RNU6-913P-201ENST00000390913 95 ntBASIC-1.77□□□□□ -2.69
HMGN3Q15651 RNU6-757P-201ENST00000410334 100 ntBASIC-1.77□□□□□ -2.69
HMGN3Q15651 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.77□□□□□ -2.69
HMGN3Q15651 MTND1P24-201ENST00000552175 861 ntBASIC-1.77□□□□□ -2.69
HMGN3Q15651 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.78□□□□□ -2.69
HMGN3Q15651 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.78□□□□□ -2.69
HMGN3Q15651 RNU6-442P-201ENST00000383968 104 ntBASIC-1.78□□□□□ -2.69
HMGN3Q15651 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.78□□□□□ -2.69
HMGN3Q15651 U8.15-201ENST00000390947 134 ntBASIC-1.78□□□□□ -2.69
HMGN3Q15651 AL590002.1-201ENST00000406554 418 ntBASIC-1.78□□□□□ -2.69
HMGN3Q15651 SNRPGP14-201ENST00000435400 219 ntBASIC-1.78□□□□□ -2.69
HMGN3Q15651 RNU6-958P-201ENST00000516995 106 ntBASIC-1.78□□□□□ -2.69
HMGN3Q15651 RNU6-1220P-201ENST00000517126 108 ntBASIC-1.78□□□□□ -2.69
HMGN3Q15651 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.78□□□□□ -2.69
HMGN3Q15651 AL356055.1-201ENST00000602528 446 ntBASIC-1.78□□□□□ -2.69
HMGN3Q15651 AC018462.2-201ENST00000605375 395 ntBASIC-1.78□□□□□ -2.69
HMGN3Q15651 AC011373.1-201ENST00000607270 237 ntBASIC-1.78□□□□□ -2.69
HMGN3Q15651 MIR8055-201ENST00000610739 97 ntBASIC-1.78□□□□□ -2.69
HMGN3Q15651 RNU6-268P-201ENST00000364174 107 ntBASIC-1.79□□□□□ -2.7
HMGN3Q15651 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.79□□□□□ -2.7
HMGN3Q15651 SNORD41.1-201ENST00000391000 69 ntBASIC-1.79□□□□□ -2.7
HMGN3Q15651 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.79□□□□□ -2.7
HMGN3Q15651 USP9YP21-201ENST00000420603 432 ntBASIC-1.79□□□□□ -2.7
HMGN3Q15651 AC022137.1-201ENST00000483735 151 ntBASIC-1.79□□□□□ -2.7
HMGN3Q15651 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.79□□□□□ -2.7
HMGN3Q15651 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.79□□□□□ -2.7
HMGN3Q15651 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.79□□□□□ -2.7
HMGN3Q15651 UBL5P4-201ENST00000562584 236 ntBASIC-1.79□□□□□ -2.7
HMGN3Q15651 MIR3165-201ENST00000579874 75 ntBASIC-1.79□□□□□ -2.7
HMGN3Q15651 MIR4473-201ENST00000583731 91 ntBASIC-1.79□□□□□ -2.7
HMGN3Q15651 AL391834.2-201ENST00000609982 546 ntBASIC-1.79□□□□□ -2.7
HMGN3Q15651 AL158209.2-201ENST00000619266 216 ntBASIC-1.79□□□□□ -2.7
HMGN3Q15651 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.8□□□□□ -2.7
HMGN3Q15651 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.8□□□□□ -2.7
HMGN3Q15651 MIR518B-201ENST00000385127 83 ntBASIC-1.8□□□□□ -2.7
HMGN3Q15651 RNA5SP261-201ENST00000410536 106 ntBASIC-1.8□□□□□ -2.7
HMGN3Q15651 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.8□□□□□ -2.7
HMGN3Q15651 SCARNA18B-201ENST00000458806 135 ntBASIC-1.8□□□□□ -2.7
HMGN3Q15651 RNU6-437P-201ENST00000459408 95 ntBASIC-1.8□□□□□ -2.7
HMGN3Q15651 RN7SKP19-201ENST00000516016 252 ntBASIC-1.8□□□□□ -2.7
HMGN3Q15651 RNA5SP67-201ENST00000516422 131 ntBASIC-1.8□□□□□ -2.7
HMGN3Q15651 SCARNA24.1-201ENST00000516465 137 ntBASIC-1.8□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms