Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 AL442644.1-201ENST00000454390 3105 ntBASIC0.56□□□□□ -2.32
CDH17Q12864 Y_RNA.160-201ENST00000363677 92 ntBASIC0.56□□□□□ -2.32
CDH17Q12864 RNU6-890P-201ENST00000384121 107 ntBASIC0.56□□□□□ -2.32
CDH17Q12864 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.56□□□□□ -2.32
CDH17Q12864 MLLT10P1-201ENST00000418346 262 ntBASIC0.56□□□□□ -2.32
CDH17Q12864 CHEK2P4-201ENST00000450340 246 ntBASIC0.56□□□□□ -2.32
CDH17Q12864 RNU6-470P-201ENST00000515954 104 ntBASIC0.56□□□□□ -2.32
CDH17Q12864 RN7SKP164-201ENST00000516138 266 ntBASIC0.56□□□□□ -2.32
CDH17Q12864 SNORA18.7-201ENST00000516910 131 ntBASIC0.56□□□□□ -2.32
CDH17Q12864 RNU7-4P-201ENST00000516961 62 ntBASIC0.56□□□□□ -2.32
CDH17Q12864 AC144568.1-201ENST00000520139 137 ntBASIC0.56□□□□□ -2.32
CDH17Q12864 AP003484.1-201ENST00000530974 250 ntBASIC0.56□□□□□ -2.32
CDH17Q12864 AC109810.1-201ENST00000534066 224 ntBASIC0.56□□□□□ -2.32
CDH17Q12864 MIR4764-201ENST00000580680 88 ntBASIC0.56□□□□□ -2.32
CDH17Q12864 MIR5690-201ENST00000583739 73 ntBASIC0.56□□□□□ -2.32
CDH17Q12864 AC005972.2-201ENST00000604690 348 ntBASIC0.56□□□□□ -2.32
CDH17Q12864 AC011476.5-201ENST00000615594 130 ntBASIC0.56□□□□□ -2.32
CDH17Q12864 TPTEP1-208ENST00000636884 213 ntBASIC0.56□□□□□ -2.32
CDH17Q12864 RNU6-1084P-201ENST00000362498 107 ntBASIC0.55□□□□□ -2.32
CDH17Q12864 RNU6-324P-201ENST00000363957 106 ntBASIC0.55□□□□□ -2.32
CDH17Q12864 SNORD50B-201ENST00000364995 70 ntBASIC0.55□□□□□ -2.32
CDH17Q12864 SNORD14.1-201ENST00000365609 90 ntBASIC0.55□□□□□ -2.32
CDH17Q12864 SNORD78.2-201ENST00000391076 69 ntBASIC0.55□□□□□ -2.32
CDH17Q12864 Y_RNA.599-201ENST00000410489 109 ntBASIC0.55□□□□□ -2.32
CDH17Q12864 RNU7-169P-201ENST00000459456 61 ntBASIC0.55□□□□□ -2.32
CDH17Q12864 RNU6-155P-201ENST00000516347 100 ntBASIC0.55□□□□□ -2.32
CDH17Q12864 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.55□□□□□ -2.32
CDH17Q12864 Y_RNA.146-201ENST00000363549 102 ntBASIC0.54□□□□□ -2.32
CDH17Q12864 SNORD81.2-201ENST00000365153 76 ntBASIC0.54□□□□□ -2.32
CDH17Q12864 SNORA72-201ENST00000384339 132 ntBASIC0.54□□□□□ -2.32
CDH17Q12864 MIR193B-201ENST00000384907 83 ntBASIC0.54□□□□□ -2.32
CDH17Q12864 MT-TL1-201ENST00000386347 75 ntBASIC0.54□□□□□ -2.32
CDH17Q12864 RNU6-1304P-201ENST00000411374 106 ntBASIC0.54□□□□□ -2.32
CDH17Q12864 SNORD123-201ENST00000459473 70 ntBASIC0.54□□□□□ -2.32
CDH17Q12864 AC113410.1-201ENST00000505029 247 ntBASIC0.54□□□□□ -2.32
CDH17Q12864 PRDX4P1-201ENST00000507189 574 ntBASIC0.54□□□□□ -2.32
CDH17Q12864 RNA5SP121-201ENST00000516537 101 ntBASIC0.54□□□□□ -2.32
CDH17Q12864 RNU7-43P-201ENST00000516554 64 ntBASIC0.54□□□□□ -2.32
CDH17Q12864 MTND4LP26-201ENST00000518144 282 ntBASIC0.54□□□□□ -2.32
CDH17Q12864 MIR4659A-201ENST00000580269 81 ntBASIC0.54□□□□□ -2.32
CDH17Q12864 RBM11P1-201ENST00000604951 799 ntBASIC0.54□□□□□ -2.32
CDH17Q12864 AC022441.3-201ENST00000605737 136 ntBASIC0.54□□□□□ -2.32
CDH17Q12864 RNU6-94P-201ENST00000607728 107 ntBASIC0.54□□□□□ -2.32
CDH17Q12864 AC022306.2-201ENST00000617563 647 ntBASIC0.54□□□□□ -2.32
CDH17Q12864 AC138305.3-201ENST00000624988 240 ntBASIC0.54□□□□□ -2.32
CDH17Q12864 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.54□□□□□ -2.32
CDH17Q12864 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
CDH17Q12864 RNA5SP48-201ENST00000363969 126 ntBASIC0.53□□□□□ -2.32
CDH17Q12864 snoU2-30.1-201ENST00000365012 70 ntBASIC0.53□□□□□ -2.32
CDH17Q12864 RNU6-708P-201ENST00000384217 107 ntBASIC0.53□□□□□ -2.32
CDH17Q12864 Y_RNA.474-201ENST00000384341 102 ntBASIC0.53□□□□□ -2.32
CDH17Q12864 MIR15B-201ENST00000385045 98 ntBASIC0.53□□□□□ -2.32
CDH17Q12864 RNU6-192P-201ENST00000391253 100 ntBASIC0.53□□□□□ -2.32
CDH17Q12864 Y_RNA.605-201ENST00000410577 105 ntBASIC0.53□□□□□ -2.32
CDH17Q12864 SNRPGP10-201ENST00000432323 225 ntBASIC0.53□□□□□ -2.32
CDH17Q12864 MTCO3P10-201ENST00000455912 772 ntBASIC0.53□□□□□ -2.32
CDH17Q12864 U8.19-201ENST00000459095 133 ntBASIC0.53□□□□□ -2.32
CDH17Q12864 U7.7-201ENST00000459276 60 ntBASIC0.53□□□□□ -2.32
CDH17Q12864 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.53□□□□□ -2.32
CDH17Q12864 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
CDH17Q12864 Y_RNA.230-201ENST00000364348 109 ntBASIC0.52□□□□□ -2.33
CDH17Q12864 Y_RNA.329-201ENST00000365209 107 ntBASIC0.52□□□□□ -2.33
CDH17Q12864 SNORD89-201ENST00000390981 114 ntBASIC0.52□□□□□ -2.33
CDH17Q12864 RNU6-131P-201ENST00000391144 107 ntBASIC0.52□□□□□ -2.33
CDH17Q12864 SNORD99-201ENST00000408612 74 ntBASIC0.52□□□□□ -2.33
CDH17Q12864 MIR1302-7-201ENST00000408841 72 ntBASIC0.52□□□□□ -2.33
CDH17Q12864 MCFD2P1-201ENST00000417812 300 ntBASIC0.52□□□□□ -2.33
CDH17Q12864 MTND1P2-201ENST00000430604 821 ntBASIC0.52□□□□□ -2.33
CDH17Q12864 HMGN2P32-201ENST00000444648 269 ntBASIC0.52□□□□□ -2.33
CDH17Q12864 RNU4-54P-201ENST00000516428 129 ntBASIC0.52□□□□□ -2.33
CDH17Q12864 AC036111.3-201ENST00000526389 112 ntBASIC0.52□□□□□ -2.33
CDH17Q12864 AC005730.3-201ENST00000583067 366 ntBASIC0.52□□□□□ -2.33
CDH17Q12864 U2.1-201ENST00000618978 145 ntBASIC0.52□□□□□ -2.33
CDH17Q12864 MIR6513-201ENST00000621188 64 ntBASIC0.52□□□□□ -2.33
CDH17Q12864 7SK.10-201ENST00000621414 298 ntBASIC0.52□□□□□ -2.33
CDH17Q12864 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
CDH17Q12864 Y_RNA.368-201ENST00000365547 113 ntBASIC0.51□□□□□ -2.33
CDH17Q12864 RNU6-1323P-201ENST00000384025 107 ntBASIC0.51□□□□□ -2.33
CDH17Q12864 RNU6-876P-201ENST00000391295 104 ntBASIC0.51□□□□□ -2.33
CDH17Q12864 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.51□□□□□ -2.33
CDH17Q12864 AL392103.1-201ENST00000447000 198 ntBASIC0.51□□□□□ -2.33
CDH17Q12864 RNU6-911P-201ENST00000516523 104 ntBASIC0.51□□□□□ -2.33
CDH17Q12864 RNU11-2P-201ENST00000516898 142 ntBASIC0.51□□□□□ -2.33
CDH17Q12864 AC025627.3-201ENST00000582078 182 ntBASIC0.51□□□□□ -2.33
CDH17Q12864 AC007742.2-201ENST00000618226 398 ntBASIC0.51□□□□□ -2.33
CDH17Q12864 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.51□□□□□ -2.33
CDH17Q12864 U6.92-201ENST00000636464 89 ntBASIC0.51□□□□□ -2.33
CDH17Q12864 AC134026.1-201ENST00000623249 2239 ntBASIC0.5□□□□□ -2.33
CDH17Q12864 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
CDH17Q12864 Y_RNA.27-201ENST00000362540 103 ntBASIC0.5□□□□□ -2.33
CDH17Q12864 Y_RNA.248-201ENST00000364501 109 ntBASIC0.5□□□□□ -2.33
CDH17Q12864 Y_RNA.314-201ENST00000365114 102 ntBASIC0.5□□□□□ -2.33
CDH17Q12864 MIR559-201ENST00000385188 96 ntBASIC0.5□□□□□ -2.33
CDH17Q12864 MTCO2P27-201ENST00000420740 428 ntBASIC0.5□□□□□ -2.33
CDH17Q12864 AC005534.2-201ENST00000431047 433 ntBASIC0.5□□□□□ -2.33
CDH17Q12864 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
CDH17Q12864 AC098869.1-201ENST00000481627 292 ntBASIC0.5□□□□□ -2.33
CDH17Q12864 RNU6-1110P-201ENST00000516462 101 ntBASIC0.5□□□□□ -2.33
CDH17Q12864 MIR548AR-201ENST00000582191 57 ntBASIC0.5□□□□□ -2.33
CDH17Q12864 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms