Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RNU4-50P-201ENST00000364361 141 ntBASIC1.08□□□□□ -2.24
GABPAQ06546 Y_RNA.813-201ENST00000364639 102 ntBASIC1.08□□□□□ -2.24
GABPAQ06546 Y_RNA.424-201ENST00000384063 103 ntBASIC1.08□□□□□ -2.24
GABPAQ06546 SNORA25-201ENST00000384384 134 ntBASIC1.08□□□□□ -2.24
GABPAQ06546 RNU6-21P-201ENST00000384710 107 ntBASIC1.08□□□□□ -2.24
GABPAQ06546 MIR548J-201ENST00000408833 112 ntBASIC1.08□□□□□ -2.24
GABPAQ06546 RNU4-30P-201ENST00000410245 143 ntBASIC1.08□□□□□ -2.24
GABPAQ06546 AC048334.1-201ENST00000477975 159 ntBASIC1.08□□□□□ -2.24
GABPAQ06546 SNORA31.2-201ENST00000516019 134 ntBASIC1.08□□□□□ -2.24
GABPAQ06546 SNORA70.22-201ENST00000517160 124 ntBASIC1.08□□□□□ -2.24
GABPAQ06546 AL357312.1-201ENST00000603879 298 ntBASIC1.08□□□□□ -2.24
GABPAQ06546 AL022345.2-201ENST00000606307 135 ntBASIC1.08□□□□□ -2.24
GABPAQ06546 AC022709.1-201ENST00000615967 87 ntBASIC1.08□□□□□ -2.24
GABPAQ06546 Y_RNA.253-201ENST00000364562 112 ntBASIC1.07□□□□□ -2.24
GABPAQ06546 Y_RNA.354-201ENST00000365448 111 ntBASIC1.07□□□□□ -2.24
GABPAQ06546 Y_RNA.431-201ENST00000384086 102 ntBASIC1.07□□□□□ -2.24
GABPAQ06546 SNORA72-201ENST00000384339 132 ntBASIC1.07□□□□□ -2.24
GABPAQ06546 MIR526A1-201ENST00000384897 85 ntBASIC1.07□□□□□ -2.24
GABPAQ06546 RPL39P39-201ENST00000455840 151 ntBASIC1.07□□□□□ -2.24
GABPAQ06546 LINC01399-202ENST00000458450 244 ntBASIC1.07□□□□□ -2.24
GABPAQ06546 Y_RNA.713-201ENST00000517013 96 ntBASIC1.07□□□□□ -2.24
GABPAQ06546 MIR3145-201ENST00000580727 82 ntBASIC1.07□□□□□ -2.24
GABPAQ06546 MIR151B-201ENST00000584249 96 ntBASIC1.07□□□□□ -2.24
GABPAQ06546 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.07□□□□□ -2.24
GABPAQ06546 AL008636.1-201ENST00000625038 1018 ntBASIC1.07□□□□□ -2.24
GABPAQ06546 Y_RNA.112-201ENST00000363250 102 ntBASIC1.06□□□□□ -2.24
GABPAQ06546 SNORD63-201ENST00000384262 68 ntBASIC1.06□□□□□ -2.24
GABPAQ06546 Y_RNA.551-201ENST00000384661 102 ntBASIC1.06□□□□□ -2.24
GABPAQ06546 RNU6-308P-201ENST00000390957 107 ntBASIC1.06□□□□□ -2.24
GABPAQ06546 AL590004.1-201ENST00000405321 300 ntBASIC1.06□□□□□ -2.24
GABPAQ06546 MIR1302-11-201ENST00000408051 138 ntBASIC1.06□□□□□ -2.24
GABPAQ06546 MIR1302-9-201ENST00000408365 138 ntBASIC1.06□□□□□ -2.24
GABPAQ06546 MIR1302-10-201ENST00000408734 138 ntBASIC1.06□□□□□ -2.24
GABPAQ06546 MIR1298-201ENST00000408783 112 ntBASIC1.06□□□□□ -2.24
GABPAQ06546 MRPL35P3-201ENST00000421557 364 ntBASIC1.06□□□□□ -2.24
GABPAQ06546 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.06□□□□□ -2.24
GABPAQ06546 snoU13.18-201ENST00000459483 104 ntBASIC1.06□□□□□ -2.24
GABPAQ06546 SNORA31.4-201ENST00000516049 129 ntBASIC1.06□□□□□ -2.24
GABPAQ06546 POLR3GP1-201ENST00000594073 261 ntBASIC1.06□□□□□ -2.24
GABPAQ06546 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
GABPAQ06546 MIR1302-2-201ENST00000607096 138 ntBASIC1.06□□□□□ -2.24
GABPAQ06546 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.06□□□□□ -2.24
GABPAQ06546 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
GABPAQ06546 U8.5-201ENST00000364528 136 ntBASIC1.05□□□□□ -2.24
GABPAQ06546 Y_RNA.310-201ENST00000365063 113 ntBASIC1.05□□□□□ -2.24
GABPAQ06546 Y_RNA.456-201ENST00000384232 111 ntBASIC1.05□□□□□ -2.24
GABPAQ06546 MIR522-201ENST00000385071 87 ntBASIC1.05□□□□□ -2.24
GABPAQ06546 RNU6-910P-201ENST00000390844 107 ntBASIC1.05□□□□□ -2.24
GABPAQ06546 RNU6-1054P-201ENST00000411293 104 ntBASIC1.05□□□□□ -2.24
GABPAQ06546 U8.19-201ENST00000459095 133 ntBASIC1.05□□□□□ -2.24
GABPAQ06546 OR2A41P-201ENST00000473586 105 ntBASIC1.05□□□□□ -2.24
GABPAQ06546 AC117454.1-201ENST00000491120 168 ntBASIC1.05□□□□□ -2.24
GABPAQ06546 SNORD45.4-201ENST00000516629 73 ntBASIC1.05□□□□□ -2.24
GABPAQ06546 RNA5SP404-201ENST00000517118 132 ntBASIC1.05□□□□□ -2.24
GABPAQ06546 MIR4762-201ENST00000585261 75 ntBASIC1.05□□□□□ -2.24
GABPAQ06546 AC090971.5-201ENST00000621102 293 ntBASIC1.05□□□□□ -2.24
GABPAQ06546 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
GABPAQ06546 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
GABPAQ06546 Y_RNA.118-201ENST00000363300 101 ntBASIC1.04□□□□□ -2.24
GABPAQ06546 Y_RNA.368-201ENST00000365547 113 ntBASIC1.04□□□□□ -2.24
GABPAQ06546 Y_RNA.395-201ENST00000383945 109 ntBASIC1.04□□□□□ -2.24
GABPAQ06546 RNU6-1323P-201ENST00000384025 107 ntBASIC1.04□□□□□ -2.24
GABPAQ06546 MIR452-201ENST00000385020 85 ntBASIC1.04□□□□□ -2.24
GABPAQ06546 MIR516B2-201ENST00000385190 85 ntBASIC1.04□□□□□ -2.24
GABPAQ06546 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
GABPAQ06546 RNU6-131P-201ENST00000391144 107 ntBASIC1.04□□□□□ -2.24
GABPAQ06546 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.04□□□□□ -2.24
GABPAQ06546 SNRPGP10-201ENST00000432323 225 ntBASIC1.04□□□□□ -2.24
GABPAQ06546 RNU6-475P-201ENST00000516073 104 ntBASIC1.04□□□□□ -2.24
GABPAQ06546 RNA5SP220-201ENST00000516298 104 ntBASIC1.04□□□□□ -2.24
GABPAQ06546 Y_RNA.714-201ENST00000517065 90 ntBASIC1.04□□□□□ -2.24
GABPAQ06546 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
GABPAQ06546 MIR4698-201ENST00000577795 80 ntBASIC1.04□□□□□ -2.24
GABPAQ06546 FAM71BP1-201ENST00000604431 523 ntBASIC1.04□□□□□ -2.24
GABPAQ06546 PART1_1.1-201ENST00000611761 217 ntBASIC1.04□□□□□ -2.24
GABPAQ06546 Y_RNA.31-201ENST00000362574 102 ntBASIC1.03□□□□□ -2.24
GABPAQ06546 SNORD42.2-201ENST00000365570 69 ntBASIC1.03□□□□□ -2.24
GABPAQ06546 SNORA70.7-201ENST00000384159 133 ntBASIC1.03□□□□□ -2.24
GABPAQ06546 Y_RNA.445-201ENST00000384168 102 ntBASIC1.03□□□□□ -2.24
GABPAQ06546 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.03□□□□□ -2.24
GABPAQ06546 RNU6-130P-201ENST00000411112 103 ntBASIC1.03□□□□□ -2.24
GABPAQ06546 AC245047.7-201ENST00000440265 293 ntBASIC1.03□□□□□ -2.24
GABPAQ06546 MTND4P19-201ENST00000446659 478 ntBASIC1.03□□□□□ -2.24
GABPAQ06546 AC010655.3-201ENST00000478818 450 ntBASIC1.03□□□□□ -2.24
GABPAQ06546 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.03□□□□□ -2.24
GABPAQ06546 SEPT14P8-201ENST00000508026 178 ntBASIC1.03□□□□□ -2.24
GABPAQ06546 RNU7-116P-201ENST00000516940 62 ntBASIC1.03□□□□□ -2.24
GABPAQ06546 AC024405.2-202ENST00000532731 184 ntBASIC1.03□□□□□ -2.24
GABPAQ06546 AC124312.5-201ENST00000604451 268 ntBASIC1.03□□□□□ -2.24
GABPAQ06546 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.03□□□□□ -2.24
GABPAQ06546 AC027335.2-201ENST00000624030 375 ntBASIC1.03□□□□□ -2.24
GABPAQ06546 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.03□□□□□ -2.24
GABPAQ06546 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
GABPAQ06546 U8.7-201ENST00000364940 136 ntBASIC1.02□□□□□ -2.25
GABPAQ06546 RNU6-867P-201ENST00000364956 107 ntBASIC1.02□□□□□ -2.25
GABPAQ06546 SNORD50B-201ENST00000364995 70 ntBASIC1.02□□□□□ -2.25
GABPAQ06546 snoU2-30.1-201ENST00000365012 70 ntBASIC1.02□□□□□ -2.25
GABPAQ06546 Y_RNA.336-201ENST00000365307 109 ntBASIC1.02□□□□□ -2.25
GABPAQ06546 Y_RNA.383-201ENST00000383855 97 ntBASIC1.02□□□□□ -2.25
GABPAQ06546 POLR2KP2-201ENST00000438155 177 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms