Protein–RNA interactions for Protein: Q03395

ROM1, Rod outer segment membrane protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1Q03395 SNORA1-201ENST00000384107 130 ntBASIC2.25□□□□□ -2.05
ROM1Q03395 RNU6-296P-201ENST00000384608 107 ntBASIC2.25□□□□□ -2.05
ROM1Q03395 RNU6-959P-201ENST00000384671 107 ntBASIC2.25□□□□□ -2.05
ROM1Q03395 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
ROM1Q03395 Y_RNA.584-201ENST00000391090 114 ntBASIC2.25□□□□□ -2.05
ROM1Q03395 RN7SKP200-201ENST00000410564 320 ntBASIC2.25□□□□□ -2.05
ROM1Q03395 RN7SKP27-201ENST00000410684 333 ntBASIC2.25□□□□□ -2.05
ROM1Q03395 SNRPGP13-201ENST00000442212 177 ntBASIC2.25□□□□□ -2.05
ROM1Q03395 RNU6-971P-201ENST00000516920 106 ntBASIC2.25□□□□□ -2.05
ROM1Q03395 MIR4529-201ENST00000578110 78 ntBASIC2.25□□□□□ -2.05
ROM1Q03395 MIR3129-201ENST00000581095 76 ntBASIC2.25□□□□□ -2.05
ROM1Q03395 MIR5194-201ENST00000582634 120 ntBASIC2.25□□□□□ -2.05
ROM1Q03395 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.25□□□□□ -2.05
ROM1Q03395 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.25□□□□□ -2.05
ROM1Q03395 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
ROM1Q03395 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.25□□□□□ -2.05
ROM1Q03395 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ROM1Q03395 RNU6-888P-201ENST00000363010 101 ntBASIC2.24□□□□□ -2.05
ROM1Q03395 Y_RNA.242-201ENST00000364473 110 ntBASIC2.24□□□□□ -2.05
ROM1Q03395 RNU6-915P-201ENST00000364943 103 ntBASIC2.24□□□□□ -2.05
ROM1Q03395 SNORD24-201ENST00000383884 75 ntBASIC2.24□□□□□ -2.05
ROM1Q03395 RNU6-442P-201ENST00000383968 104 ntBASIC2.24□□□□□ -2.05
ROM1Q03395 SNORA80E-201ENST00000384744 137 ntBASIC2.24□□□□□ -2.05
ROM1Q03395 MIR548A2-201ENST00000384956 97 ntBASIC2.24□□□□□ -2.05
ROM1Q03395 CALM2P4-201ENST00000430810 426 ntBASIC2.24□□□□□ -2.05
ROM1Q03395 AC105272.1-201ENST00000438604 198 ntBASIC2.24□□□□□ -2.05
ROM1Q03395 AC114811.1-201ENST00000507207 168 ntBASIC2.24□□□□□ -2.05
ROM1Q03395 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
ROM1Q03395 RNU6-693P-201ENST00000516134 107 ntBASIC2.24□□□□□ -2.05
ROM1Q03395 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.24□□□□□ -2.05
ROM1Q03395 AL365205.2-201ENST00000594586 68 ntBASIC2.24□□□□□ -2.05
ROM1Q03395 AC245884.12-201ENST00000615364 59 ntBASIC2.24□□□□□ -2.05
ROM1Q03395 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
ROM1Q03395 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.24□□□□□ -2.05
ROM1Q03395 AC080100.1-201ENST00000624239 5356 ntBASIC2.23□□□□□ -2.05
ROM1Q03395 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
ROM1Q03395 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
ROM1Q03395 MIRLET7C-201ENST00000362160 84 ntBASIC2.23□□□□□ -2.05
ROM1Q03395 RNA5SP456-201ENST00000364002 114 ntBASIC2.23□□□□□ -2.05
ROM1Q03395 RNU1-51P-201ENST00000365345 176 ntBASIC2.23□□□□□ -2.05
ROM1Q03395 AL034345.1-201ENST00000407768 123 ntBASIC2.23□□□□□ -2.05
ROM1Q03395 MIR548I2-201ENST00000408348 149 ntBASIC2.23□□□□□ -2.05
ROM1Q03395 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.23□□□□□ -2.05
ROM1Q03395 SNORA18.4-201ENST00000516440 124 ntBASIC2.23□□□□□ -2.05
ROM1Q03395 RNU1-104P-201ENST00000517280 175 ntBASIC2.23□□□□□ -2.05
ROM1Q03395 AP001328.1-201ENST00000528550 176 ntBASIC2.23□□□□□ -2.05
ROM1Q03395 MIR1254-2-201ENST00000579553 63 ntBASIC2.23□□□□□ -2.05
ROM1Q03395 U1.36-201ENST00000620684 176 ntBASIC2.23□□□□□ -2.05
ROM1Q03395 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ROM1Q03395 AC007336.1-201ENST00000576365 3828 ntBASIC2.23□□□□□ -2.05
ROM1Q03395 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
ROM1Q03395 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ROM1Q03395 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
ROM1Q03395 RNU6-268P-201ENST00000364174 107 ntBASIC2.22□□□□□ -2.05
ROM1Q03395 RNU6-163P-201ENST00000384396 106 ntBASIC2.22□□□□□ -2.05
ROM1Q03395 RNU6-1117P-201ENST00000384525 104 ntBASIC2.22□□□□□ -2.05
ROM1Q03395 RNU6-950P-201ENST00000384651 107 ntBASIC2.22□□□□□ -2.05
ROM1Q03395 RNU6-1031P-201ENST00000384773 107 ntBASIC2.22□□□□□ -2.05
ROM1Q03395 MIR518F-201ENST00000384973 87 ntBASIC2.22□□□□□ -2.05
ROM1Q03395 U8.16-201ENST00000391279 133 ntBASIC2.22□□□□□ -2.05
ROM1Q03395 MIR548O-201ENST00000408583 114 ntBASIC2.22□□□□□ -2.05
ROM1Q03395 RNU6-1211P-201ENST00000459179 105 ntBASIC2.22□□□□□ -2.05
ROM1Q03395 RNU7-34P-201ENST00000459394 64 ntBASIC2.22□□□□□ -2.05
ROM1Q03395 Y_RNA.686-201ENST00000516548 134 ntBASIC2.22□□□□□ -2.05
ROM1Q03395 AC131055.1-201ENST00000584626 316 ntBASIC2.22□□□□□ -2.05
ROM1Q03395 AC006441.5-201ENST00000612680 209 ntBASIC2.22□□□□□ -2.05
ROM1Q03395 MIR6798-201ENST00000612887 67 ntBASIC2.22□□□□□ -2.05
ROM1Q03395 AP001340.1-201ENST00000624405 217 ntBASIC2.22□□□□□ -2.05
ROM1Q03395 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.22□□□□□ -2.05
ROM1Q03395 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.22□□□□□ -2.05
ROM1Q03395 AL136360.1-201ENST00000503377 1900 ntBASIC2.22□□□□□ -2.05
ROM1Q03395 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
ROM1Q03395 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
ROM1Q03395 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
ROM1Q03395 U8.1-201ENST00000362843 134 ntBASIC2.21□□□□□ -2.06
ROM1Q03395 RNA5SP393-201ENST00000363423 117 ntBASIC2.21□□□□□ -2.06
ROM1Q03395 MIR23B-201ENST00000384832 97 ntBASIC2.21□□□□□ -2.06
ROM1Q03395 RNA5SP100-201ENST00000410903 110 ntBASIC2.21□□□□□ -2.06
ROM1Q03395 RNA5SP59-201ENST00000410922 110 ntBASIC2.21□□□□□ -2.06
ROM1Q03395 RNA5SP127-201ENST00000411051 133 ntBASIC2.21□□□□□ -2.06
ROM1Q03395 SNRPGP14-201ENST00000435400 219 ntBASIC2.21□□□□□ -2.06
ROM1Q03395 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.21□□□□□ -2.06
ROM1Q03395 CYCTP-201ENST00000504253 315 ntBASIC2.21□□□□□ -2.06
ROM1Q03395 RNU7-25P-201ENST00000516544 62 ntBASIC2.21□□□□□ -2.06
ROM1Q03395 SCARNA16.3-201ENST00000516595 184 ntBASIC2.21□□□□□ -2.06
ROM1Q03395 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.21□□□□□ -2.06
ROM1Q03395 RNU2-19P-201ENST00000517288 84 ntBASIC2.21□□□□□ -2.06
ROM1Q03395 MIR4446-201ENST00000578505 67 ntBASIC2.21□□□□□ -2.06
ROM1Q03395 ELOCP29-201ENST00000588193 334 ntBASIC2.21□□□□□ -2.06
ROM1Q03395 AL161756.2-201ENST00000604597 246 ntBASIC2.21□□□□□ -2.06
ROM1Q03395 AC011603.4-201ENST00000611325 277 ntBASIC2.21□□□□□ -2.06
ROM1Q03395 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.21□□□□□ -2.06
ROM1Q03395 TUG1_4.1-201ENST00000619464 181 ntBASIC2.21□□□□□ -2.06
ROM1Q03395 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.21□□□□□ -2.06
ROM1Q03395 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ROM1Q03395 RNU6-859P-201ENST00000362728 107 ntBASIC2.2□□□□□ -2.06
ROM1Q03395 RNU6-525P-201ENST00000363685 104 ntBASIC2.2□□□□□ -2.06
ROM1Q03395 Y_RNA.291-201ENST00000364886 113 ntBASIC2.2□□□□□ -2.06
ROM1Q03395 Y_RNA.336-201ENST00000365307 109 ntBASIC2.2□□□□□ -2.06
ROM1Q03395 RNU6-424P-201ENST00000384367 105 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms