Protein–RNA interactions for Protein: Q02446

SP4, Transcription factor Sp4, humanhuman

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP4Q02446 RNU2-70P-201ENST00000410718 179 ntBASIC0.43□□□□□ -2.34
SP4Q02446 AC244098.3-201ENST00000424803 96 ntBASIC0.43□□□□□ -2.34
SP4Q02446 MTND1P4-201ENST00000435196 415 ntBASIC0.43□□□□□ -2.34
SP4Q02446 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.43□□□□□ -2.34
SP4Q02446 AL392103.1-201ENST00000447000 198 ntBASIC0.43□□□□□ -2.34
SP4Q02446 U8.19-201ENST00000459095 133 ntBASIC0.43□□□□□ -2.34
SP4Q02446 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.43□□□□□ -2.34
SP4Q02446 AC116353.2-201ENST00000505332 712 ntBASIC0.43□□□□□ -2.34
SP4Q02446 AC093027.1-201ENST00000546698 429 ntBASIC0.43□□□□□ -2.34
SP4Q02446 AC011195.1-201ENST00000578177 177 ntBASIC0.43□□□□□ -2.34
SP4Q02446 AC090517.2-201ENST00000614966 680 ntBASIC0.43□□□□□ -2.34
SP4Q02446 AC240442.1-201ENST00000616055 283 ntBASIC0.43□□□□□ -2.34
SP4Q02446 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
SP4Q02446 Y_RNA.68-201ENST00000362881 102 ntBASIC0.42□□□□□ -2.34
SP4Q02446 Y_RNA.88-201ENST00000363029 99 ntBASIC0.42□□□□□ -2.34
SP4Q02446 RNU6-623P-201ENST00000363143 105 ntBASIC0.42□□□□□ -2.34
SP4Q02446 Y_RNA.101-201ENST00000363154 102 ntBASIC0.42□□□□□ -2.34
SP4Q02446 Y_RNA.172-201ENST00000363765 102 ntBASIC0.42□□□□□ -2.34
SP4Q02446 SNORD113.3-201ENST00000364630 78 ntBASIC0.42□□□□□ -2.34
SP4Q02446 RNU6-99P-201ENST00000364721 107 ntBASIC0.42□□□□□ -2.34
SP4Q02446 VTRNA1-3-201ENST00000365645 89 ntBASIC0.42□□□□□ -2.34
SP4Q02446 RNU6-1304P-201ENST00000411374 106 ntBASIC0.42□□□□□ -2.34
SP4Q02446 AC016907.1-201ENST00000419483 435 ntBASIC0.42□□□□□ -2.34
SP4Q02446 MTND4P28-201ENST00000426217 387 ntBASIC0.42□□□□□ -2.34
SP4Q02446 CHEK2P4-201ENST00000450340 246 ntBASIC0.42□□□□□ -2.34
SP4Q02446 AC011352.1-201ENST00000512300 793 ntBASIC0.42□□□□□ -2.34
SP4Q02446 AC080013.6-201ENST00000606185 215 ntBASIC0.42□□□□□ -2.34
SP4Q02446 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.42□□□□□ -2.34
SP4Q02446 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.42□□□□□ -2.34
SP4Q02446 AC134026.1-201ENST00000623249 2239 ntBASIC0.42□□□□□ -2.34
SP4Q02446 SNORD50B-201ENST00000364995 70 ntBASIC0.41□□□□□ -2.34
SP4Q02446 RNU6-926P-201ENST00000384075 107 ntBASIC0.41□□□□□ -2.34
SP4Q02446 Y_RNA.516-201ENST00000384541 124 ntBASIC0.41□□□□□ -2.34
SP4Q02446 MIR1827-201ENST00000408549 66 ntBASIC0.41□□□□□ -2.34
SP4Q02446 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.41□□□□□ -2.34
SP4Q02446 MIR1302-7-201ENST00000408841 72 ntBASIC0.41□□□□□ -2.34
SP4Q02446 HMGN1P33-201ENST00000432945 451 ntBASIC0.41□□□□□ -2.34
SP4Q02446 FCF1P4-201ENST00000448326 183 ntBASIC0.41□□□□□ -2.34
SP4Q02446 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.41□□□□□ -2.34
SP4Q02446 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.41□□□□□ -2.34
SP4Q02446 AC005972.2-201ENST00000604690 348 ntBASIC0.41□□□□□ -2.34
SP4Q02446 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.41□□□□□ -2.34
SP4Q02446 MIR4251-201ENST00000635819 61 ntBASIC0.41□□□□□ -2.34
SP4Q02446 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
SP4Q02446 Y_RNA.178-201ENST00000363832 102 ntBASIC0.4□□□□□ -2.35
SP4Q02446 RNU6-324P-201ENST00000363957 106 ntBASIC0.4□□□□□ -2.35
SP4Q02446 RNU6-654P-201ENST00000364373 107 ntBASIC0.4□□□□□ -2.35
SP4Q02446 SNORA72-201ENST00000384339 132 ntBASIC0.4□□□□□ -2.35
SP4Q02446 SNORD105-201ENST00000386910 85 ntBASIC0.4□□□□□ -2.35
SP4Q02446 SNORA69.1-201ENST00000390904 137 ntBASIC0.4□□□□□ -2.35
SP4Q02446 SNORA75.4-201ENST00000391278 119 ntBASIC0.4□□□□□ -2.35
SP4Q02446 SNRPGP10-201ENST00000432323 225 ntBASIC0.4□□□□□ -2.35
SP4Q02446 AC105313.1-201ENST00000509121 353 ntBASIC0.4□□□□□ -2.35
SP4Q02446 Y_RNA.714-201ENST00000517065 90 ntBASIC0.4□□□□□ -2.35
SP4Q02446 AC005176.2-201ENST00000596933 147 ntBASIC0.4□□□□□ -2.35
SP4Q02446 Z83818.1-201ENST00000603584 150 ntBASIC0.4□□□□□ -2.35
SP4Q02446 MIR6516-201ENST00000630554 81 ntBASIC0.4□□□□□ -2.35
SP4Q02446 SNORA2B-201ENST00000384583 137 ntBASIC0.39□□□□□ -2.35
SP4Q02446 RNU6-1237P-201ENST00000384777 107 ntBASIC0.39□□□□□ -2.35
SP4Q02446 Y_RNA.592-201ENST00000410274 109 ntBASIC0.39□□□□□ -2.35
SP4Q02446 RNU6-613P-201ENST00000410412 108 ntBASIC0.39□□□□□ -2.35
SP4Q02446 RNA5SP222-201ENST00000411039 105 ntBASIC0.39□□□□□ -2.35
SP4Q02446 AC087588.2-201ENST00000617667 426 ntBASIC0.39□□□□□ -2.35
SP4Q02446 SNORD18A-201ENST00000363753 72 ntBASIC0.38□□□□□ -2.35
SP4Q02446 Y_RNA.368-201ENST00000365547 113 ntBASIC0.38□□□□□ -2.35
SP4Q02446 Y_RNA.577-201ENST00000384794 101 ntBASIC0.38□□□□□ -2.35
SP4Q02446 MIR1277-201ENST00000408536 78 ntBASIC0.38□□□□□ -2.35
SP4Q02446 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.38□□□□□ -2.35
SP4Q02446 RNU6-155P-201ENST00000516347 100 ntBASIC0.38□□□□□ -2.35
SP4Q02446 RNU6-1012P-201ENST00000516606 109 ntBASIC0.38□□□□□ -2.35
SP4Q02446 MIR4300-201ENST00000581016 96 ntBASIC0.38□□□□□ -2.35
SP4Q02446 AC060780.3-201ENST00000589464 80 ntBASIC0.38□□□□□ -2.35
SP4Q02446 AL355073.2-201ENST00000612106 557 ntBASIC0.38□□□□□ -2.35
SP4Q02446 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.37□□□□□ -2.35
SP4Q02446 MIR1-1-201ENST00000362147 71 ntBASIC0.37□□□□□ -2.35
SP4Q02446 Y_RNA.148-201ENST00000363557 117 ntBASIC0.37□□□□□ -2.35
SP4Q02446 Y_RNA.370-201ENST00000365589 108 ntBASIC0.37□□□□□ -2.35
SP4Q02446 SNORA36.2-201ENST00000384004 127 ntBASIC0.37□□□□□ -2.35
SP4Q02446 Y_RNA.446-201ENST00000384178 104 ntBASIC0.37□□□□□ -2.35
SP4Q02446 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
SP4Q02446 MIR548F1-201ENST00000408667 84 ntBASIC0.37□□□□□ -2.35
SP4Q02446 RNA5SP95-201ENST00000410319 137 ntBASIC0.37□□□□□ -2.35
SP4Q02446 RNU6-1199P-201ENST00000411249 104 ntBASIC0.37□□□□□ -2.35
SP4Q02446 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.37□□□□□ -2.35
SP4Q02446 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.37□□□□□ -2.35
SP4Q02446 RNU6-436P-201ENST00000516171 114 ntBASIC0.37□□□□□ -2.35
SP4Q02446 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.37□□□□□ -2.35
SP4Q02446 MIR4514-201ENST00000581410 57 ntBASIC0.37□□□□□ -2.35
SP4Q02446 AC002553.4-201ENST00000616896 331 ntBASIC0.37□□□□□ -2.35
SP4Q02446 AL669831.3-213ENST00000636676 183 ntBASIC0.37□□□□□ -2.35
SP4Q02446 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
SP4Q02446 SNORD14E-201ENST00000364009 85 ntBASIC0.36□□□□□ -2.35
SP4Q02446 RNU6-20P-201ENST00000384106 107 ntBASIC0.36□□□□□ -2.35
SP4Q02446 RNY3P4-201ENST00000384428 101 ntBASIC0.36□□□□□ -2.35
SP4Q02446 SNORD28B-201ENST00000390993 75 ntBASIC0.36□□□□□ -2.35
SP4Q02446 SNORD78.2-201ENST00000391076 69 ntBASIC0.36□□□□□ -2.35
SP4Q02446 RNU6-192P-201ENST00000391253 100 ntBASIC0.36□□□□□ -2.35
SP4Q02446 MTATP6P26-201ENST00000445926 662 ntBASIC0.36□□□□□ -2.35
SP4Q02446 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.36□□□□□ -2.35
SP4Q02446 RNU6-718P-201ENST00000516166 105 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 232.7 ms