Protein–RNA interactions for Protein: Q01094

E2F1, Transcription factor E2F1, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1Q01094 Y_RNA.203-201ENST00000364106 102 ntBASIC2.08□□□□□ -2.08
E2F1Q01094 SNORA3A-201ENST00000364113 130 ntBASIC2.08□□□□□ -2.08
E2F1Q01094 RNU6-125P-201ENST00000384505 107 ntBASIC2.08□□□□□ -2.08
E2F1Q01094 MIR562-201ENST00000384894 95 ntBASIC2.08□□□□□ -2.08
E2F1Q01094 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.08□□□□□ -2.08
E2F1Q01094 AC245047.8-201ENST00000456455 284 ntBASIC2.08□□□□□ -2.08
E2F1Q01094 Y_RNA.676-201ENST00000516393 96 ntBASIC2.08□□□□□ -2.08
E2F1Q01094 RNU6-1291P-201ENST00000516591 104 ntBASIC2.08□□□□□ -2.08
E2F1Q01094 RNU6-1212P-201ENST00000517023 104 ntBASIC2.08□□□□□ -2.08
E2F1Q01094 AL358944.1-201ENST00000528537 144 ntBASIC2.08□□□□□ -2.08
E2F1Q01094 MIR3910-1-201ENST00000580936 111 ntBASIC2.08□□□□□ -2.08
E2F1Q01094 AC069114.2-201ENST00000604699 304 ntBASIC2.08□□□□□ -2.08
E2F1Q01094 AL021707.8-201ENST00000609428 183 ntBASIC2.08□□□□□ -2.08
E2F1Q01094 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.08□□□□□ -2.08
E2F1Q01094 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
E2F1Q01094 AL596028.1-201ENST00000326971 197 ntBASIC2.07□□□□□ -2.08
E2F1Q01094 Y_RNA.23-201ENST00000362496 106 ntBASIC2.07□□□□□ -2.08
E2F1Q01094 RNU4-41P-201ENST00000364426 143 ntBASIC2.07□□□□□ -2.08
E2F1Q01094 RNU6-275P-201ENST00000364910 107 ntBASIC2.07□□□□□ -2.08
E2F1Q01094 U8.13-201ENST00000390842 128 ntBASIC2.07□□□□□ -2.08
E2F1Q01094 RNU6-578P-201ENST00000390980 103 ntBASIC2.07□□□□□ -2.08
E2F1Q01094 RNA5SP496-201ENST00000391240 109 ntBASIC2.07□□□□□ -2.08
E2F1Q01094 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.07□□□□□ -2.08
E2F1Q01094 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.07□□□□□ -2.08
E2F1Q01094 Y_RNA.797-201ENST00000515977 94 ntBASIC2.07□□□□□ -2.08
E2F1Q01094 RNU6-1007P-201ENST00000516586 107 ntBASIC2.07□□□□□ -2.08
E2F1Q01094 MIR3133-201ENST00000583157 78 ntBASIC2.07□□□□□ -2.08
E2F1Q01094 AC108706.1-201ENST00000611053 297 ntBASIC2.07□□□□□ -2.08
E2F1Q01094 AC012640.5-201ENST00000623897 319 ntBASIC2.07□□□□□ -2.08
E2F1Q01094 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
E2F1Q01094 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
E2F1Q01094 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
E2F1Q01094 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
E2F1Q01094 RNU6-1019P-201ENST00000364424 107 ntBASIC2.06□□□□□ -2.08
E2F1Q01094 RNU6-312P-201ENST00000364629 107 ntBASIC2.06□□□□□ -2.08
E2F1Q01094 RNU6-1080P-201ENST00000383982 107 ntBASIC2.06□□□□□ -2.08
E2F1Q01094 Y_RNA.441-201ENST00000384123 112 ntBASIC2.06□□□□□ -2.08
E2F1Q01094 MT-TT-201ENST00000387460 66 ntBASIC2.06□□□□□ -2.08
E2F1Q01094 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
E2F1Q01094 AL023284.1-201ENST00000403956 276 ntBASIC2.06□□□□□ -2.08
E2F1Q01094 AL512604.1-201ENST00000404812 257 ntBASIC2.06□□□□□ -2.08
E2F1Q01094 RNU5E-9P-201ENST00000411164 104 ntBASIC2.06□□□□□ -2.08
E2F1Q01094 HMGN2P38-201ENST00000423806 265 ntBASIC2.06□□□□□ -2.08
E2F1Q01094 AC245047.4-201ENST00000433189 144 ntBASIC2.06□□□□□ -2.08
E2F1Q01094 RPS27P1-201ENST00000450552 247 ntBASIC2.06□□□□□ -2.08
E2F1Q01094 AC090255.1-201ENST00000495779 349 ntBASIC2.06□□□□□ -2.08
E2F1Q01094 RNA5SP182-201ENST00000516064 82 ntBASIC2.06□□□□□ -2.08
E2F1Q01094 SNORA31.25-201ENST00000517242 134 ntBASIC2.06□□□□□ -2.08
E2F1Q01094 MIR2681-201ENST00000581814 105 ntBASIC2.06□□□□□ -2.08
E2F1Q01094 AC022217.4-201ENST00000604389 163 ntBASIC2.06□□□□□ -2.08
E2F1Q01094 AP000553.5-201ENST00000641933 54 ntBASIC2.06□□□□□ -2.08
E2F1Q01094 AC245060.5-201ENST00000610778 3293 ntBASIC2.06□□□□□ -2.08
E2F1Q01094 Y_RNA.796-201ENST00000364268 102 ntBASIC2.05□□□□□ -2.08
E2F1Q01094 Y_RNA.267-201ENST00000364679 109 ntBASIC2.05□□□□□ -2.08
E2F1Q01094 Y_RNA.799-201ENST00000364992 102 ntBASIC2.05□□□□□ -2.08
E2F1Q01094 RNY3P5-201ENST00000384127 102 ntBASIC2.05□□□□□ -2.08
E2F1Q01094 SNORA48.1-201ENST00000390879 135 ntBASIC2.05□□□□□ -2.08
E2F1Q01094 RNU6-1228P-201ENST00000391014 107 ntBASIC2.05□□□□□ -2.08
E2F1Q01094 AL606845.1-201ENST00000404881 255 ntBASIC2.05□□□□□ -2.08
E2F1Q01094 AL606517.2-201ENST00000442855 241 ntBASIC2.05□□□□□ -2.08
E2F1Q01094 AC233266.1-201ENST00000454518 96 ntBASIC2.05□□□□□ -2.08
E2F1Q01094 AC104435.1-201ENST00000483483 166 ntBASIC2.05□□□□□ -2.08
E2F1Q01094 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.05□□□□□ -2.08
E2F1Q01094 AP002004.2-201ENST00000531656 154 ntBASIC2.05□□□□□ -2.08
E2F1Q01094 AC109810.1-201ENST00000534066 224 ntBASIC2.05□□□□□ -2.08
E2F1Q01094 AC084364.2-201ENST00000546924 395 ntBASIC2.05□□□□□ -2.08
E2F1Q01094 MIR5094-201ENST00000578766 85 ntBASIC2.05□□□□□ -2.08
E2F1Q01094 AC242852.1-201ENST00000612151 96 ntBASIC2.05□□□□□ -2.08
E2F1Q01094 AC244015.1-201ENST00000622301 99 ntBASIC2.05□□□□□ -2.08
E2F1Q01094 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.05□□□□□ -2.08
E2F1Q01094 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
E2F1Q01094 SNORA1B-201ENST00000362535 133 ntBASIC2.04□□□□□ -2.08
E2F1Q01094 RNU6-1209P-201ENST00000363655 107 ntBASIC2.04□□□□□ -2.08
E2F1Q01094 Y_RNA.506-201ENST00000384494 102 ntBASIC2.04□□□□□ -2.08
E2F1Q01094 MIR548M-201ENST00000408260 86 ntBASIC2.04□□□□□ -2.08
E2F1Q01094 Y_RNA.621-201ENST00000411065 96 ntBASIC2.04□□□□□ -2.08
E2F1Q01094 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
E2F1Q01094 SNORD11-201ENST00000459124 84 ntBASIC2.04□□□□□ -2.08
E2F1Q01094 RNVU1-2-201ENST00000516326 135 ntBASIC2.04□□□□□ -2.08
E2F1Q01094 RNU7-193P-201ENST00000516723 65 ntBASIC2.04□□□□□ -2.08
E2F1Q01094 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.04□□□□□ -2.08
E2F1Q01094 RPL23AP91-201ENST00000569211 455 ntBASIC2.04□□□□□ -2.08
E2F1Q01094 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
E2F1Q01094 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
E2F1Q01094 Y_RNA.253-201ENST00000364562 112 ntBASIC2.03□□□□□ -2.08
E2F1Q01094 MIR583-201ENST00000384846 75 ntBASIC2.03□□□□□ -2.08
E2F1Q01094 RNU6-394P-201ENST00000410735 107 ntBASIC2.03□□□□□ -2.08
E2F1Q01094 RNA5SP501-201ENST00000410990 112 ntBASIC2.03□□□□□ -2.08
E2F1Q01094 RNU6-1135P-201ENST00000411083 103 ntBASIC2.03□□□□□ -2.08
E2F1Q01094 AC069257.2-201ENST00000441819 155 ntBASIC2.03□□□□□ -2.08
E2F1Q01094 AC005840.1-201ENST00000498412 377 ntBASIC2.03□□□□□ -2.08
E2F1Q01094 RNU6-346P-201ENST00000516288 111 ntBASIC2.03□□□□□ -2.08
E2F1Q01094 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.03□□□□□ -2.08
E2F1Q01094 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.03□□□□□ -2.08
E2F1Q01094 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
E2F1Q01094 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
E2F1Q01094 RNA5SP37-201ENST00000365420 130 ntBASIC2.02□□□□□ -2.09
E2F1Q01094 RNU4-52P-201ENST00000384209 138 ntBASIC2.02□□□□□ -2.09
E2F1Q01094 RNA5SP109-201ENST00000391010 116 ntBASIC2.02□□□□□ -2.09
E2F1Q01094 SNORD23.1-201ENST00000408212 104 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms