Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.82□□□□□ -2.54
PRKDCP78527 RNU7-73P-201ENST00000458743 63 ntBASIC-0.82□□□□□ -2.54
PRKDCP78527 RPL23AP75-201ENST00000491601 451 ntBASIC-0.82□□□□□ -2.54
PRKDCP78527 RNA5SP272-201ENST00000516095 111 ntBASIC-0.82□□□□□ -2.54
PRKDCP78527 AC123904.2-201ENST00000548059 300 ntBASIC-0.82□□□□□ -2.54
PRKDCP78527 MIR4752-201ENST00000579672 72 ntBASIC-0.82□□□□□ -2.54
PRKDCP78527 AF250324.2-201ENST00000608299 610 ntBASIC-0.82□□□□□ -2.54
PRKDCP78527 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.82□□□□□ -2.54
PRKDCP78527 SNORD87-201ENST00000364849 89 ntBASIC-0.82□□□□□ -2.54
PRKDCP78527 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.82□□□□□ -2.54
PRKDCP78527 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.82□□□□□ -2.54
PRKDCP78527 ELOCP4-201ENST00000420090 333 ntBASIC-0.82□□□□□ -2.54
PRKDCP78527 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.82□□□□□ -2.54
PRKDCP78527 SEPT14P24-201ENST00000447236 180 ntBASIC-0.82□□□□□ -2.54
PRKDCP78527 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.82□□□□□ -2.54
PRKDCP78527 BNIP3P40-201ENST00000596017 556 ntBASIC-0.82□□□□□ -2.54
PRKDCP78527 AL445584.3-201ENST00000617173 78 ntBASIC-0.82□□□□□ -2.54
PRKDCP78527 MIR16-2-201ENST00000362117 81 ntBASIC-0.82□□□□□ -2.54
PRKDCP78527 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.82□□□□□ -2.54
PRKDCP78527 AP000542.1-201ENST00000448473 371 ntBASIC-0.82□□□□□ -2.54
PRKDCP78527 RNA5SP261-201ENST00000410536 106 ntBASIC-0.83□□□□□ -2.54
PRKDCP78527 MIR4762-201ENST00000585261 75 ntBASIC-0.83□□□□□ -2.54
PRKDCP78527 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.83□□□□□ -2.54
PRKDCP78527 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.83□□□□□ -2.54
PRKDCP78527 USP9YP16-201ENST00000430287 407 ntBASIC-0.83□□□□□ -2.54
PRKDCP78527 HMGN2P32-201ENST00000444648 269 ntBASIC-0.83□□□□□ -2.54
PRKDCP78527 EPS15P1-201ENST00000448836 336 ntBASIC-0.83□□□□□ -2.54
PRKDCP78527 AC068137.4-201ENST00000638485 296 ntBASIC-0.83□□□□□ -2.54
PRKDCP78527 RNU6-481P-201ENST00000384194 107 ntBASIC-0.83□□□□□ -2.54
PRKDCP78527 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-0.83□□□□□ -2.54
PRKDCP78527 MTCO3P8-201ENST00000453691 755 ntBASIC-0.83□□□□□ -2.54
PRKDCP78527 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.83□□□□□ -2.54
PRKDCP78527 HIF1AP1-201ENST00000553642 175 ntBASIC-0.83□□□□□ -2.54
PRKDCP78527 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.83□□□□□ -2.54
PRKDCP78527 RNU6-442P-201ENST00000383968 104 ntBASIC-0.83□□□□□ -2.54
PRKDCP78527 AL500527.2-201ENST00000454105 95 ntBASIC-0.83□□□□□ -2.54
PRKDCP78527 RNU7-74P-201ENST00000459104 62 ntBASIC-0.83□□□□□ -2.54
PRKDCP78527 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.83□□□□□ -2.54
PRKDCP78527 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.83□□□□□ -2.54
PRKDCP78527 SNORA25.17-201ENST00000517184 124 ntBASIC-0.83□□□□□ -2.54
PRKDCP78527 RNA5SP169-201ENST00000517268 117 ntBASIC-0.83□□□□□ -2.54
PRKDCP78527 MTND1P5-201ENST00000517906 940 ntBASIC-0.83□□□□□ -2.54
PRKDCP78527 MIR4789-201ENST00000577469 82 ntBASIC-0.83□□□□□ -2.54
PRKDCP78527 AL353803.5-201ENST00000599815 141 ntBASIC-0.83□□□□□ -2.54
PRKDCP78527 uc_338.11-201ENST00000619132 160 ntBASIC-0.83□□□□□ -2.54
PRKDCP78527 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-0.84□□□□□ -2.54
PRKDCP78527 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.84□□□□□ -2.54
PRKDCP78527 RNU6-434P-201ENST00000384376 107 ntBASIC-0.84□□□□□ -2.54
PRKDCP78527 RNU6-387P-201ENST00000411331 105 ntBASIC-0.84□□□□□ -2.54
PRKDCP78527 AC004866.1-201ENST00000411748 78 ntBASIC-0.84□□□□□ -2.54
PRKDCP78527 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.84□□□□□ -2.54
PRKDCP78527 AC097478.2-201ENST00000610572 514 ntBASIC-0.84□□□□□ -2.54
PRKDCP78527 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.84□□□□□ -2.54
PRKDCP78527 SNORD14E-201ENST00000364009 85 ntBASIC-0.84□□□□□ -2.54
PRKDCP78527 RNU6-61P-201ENST00000365528 109 ntBASIC-0.84□□□□□ -2.54
PRKDCP78527 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.84□□□□□ -2.54
PRKDCP78527 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.84□□□□□ -2.54
PRKDCP78527 MIR4491-201ENST00000581087 68 ntBASIC-0.84□□□□□ -2.54
PRKDCP78527 DISC2.1-201ENST00000612827 205 ntBASIC-0.84□□□□□ -2.54
PRKDCP78527 MIR6851-201ENST00000617060 67 ntBASIC-0.84□□□□□ -2.54
PRKDCP78527 SNORA43.4-201ENST00000629559 138 ntBASIC-0.84□□□□□ -2.54
PRKDCP78527 U6.114-201ENST00000636407 96 ntBASIC-0.84□□□□□ -2.54
PRKDCP78527 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.84□□□□□ -2.54
PRKDCP78527 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.84□□□□□ -2.54
PRKDCP78527 SNORD45.3-201ENST00000363836 72 ntBASIC-0.84□□□□□ -2.54
PRKDCP78527 RNU6-692P-201ENST00000384496 107 ntBASIC-0.84□□□□□ -2.54
PRKDCP78527 SNORD28-201ENST00000384706 75 ntBASIC-0.84□□□□□ -2.54
PRKDCP78527 MIR522-201ENST00000385071 87 ntBASIC-0.84□□□□□ -2.54
PRKDCP78527 AC004223.4-201ENST00000612426 332 ntBASIC-0.84□□□□□ -2.54
PRKDCP78527 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 AL031779.1-201ENST00000415663 330 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 RNU6-1102P-201ENST00000516149 96 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 SNORD22.1-201ENST00000516331 125 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 SNORA25.14-201ENST00000516481 132 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 MIR4423-201ENST00000580922 80 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 Y_RNA.110-201ENST00000363220 99 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 RNU6-827P-201ENST00000365553 106 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 SNORD41.1-201ENST00000391000 69 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 AC090844.1-201ENST00000422019 156 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 AC236972.2-201ENST00000434979 310 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 SNORD123-201ENST00000459473 70 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.85□□□□□ -2.55
PRKDCP78527 AL049777.1-201ENST00000622740 518 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 AC097460.3-201ENST00000623099 442 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 AC006435.5-201ENST00000624486 112 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 AC126544.2-201ENST00000625174 749 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-0.85□□□□□ -2.55
PRKDCP78527 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.85□□□□□ -2.55
PRKDCP78527 RNU6-759P-201ENST00000516740 103 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 AL512506.1-201ENST00000613918 449 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 AC132825.6-201ENST00000638861 357 ntBASIC-0.85□□□□□ -2.55
PRKDCP78527 SNORD115-44-201ENST00000365391 82 ntBASIC-0.86□□□□□ -2.55
PRKDCP78527 RPS29P13-201ENST00000402041 169 ntBASIC-0.86□□□□□ -2.55
PRKDCP78527 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.86□□□□□ -2.55
PRKDCP78527 SCARNA18B-201ENST00000458806 135 ntBASIC-0.86□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 225.1 ms