Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RNU6-765P-201ENST00000516916 99 ntBASIC-1.25□□□□□ -2.61
UBA52P62987 AC069113.1-201ENST00000517763 267 ntBASIC-1.25□□□□□ -2.61
UBA52P62987 MIR3115-201ENST00000577915 68 ntBASIC-1.25□□□□□ -2.61
UBA52P62987 MIR3684-201ENST00000579779 74 ntBASIC-1.25□□□□□ -2.61
UBA52P62987 AC105081.1-201ENST00000617727 106 ntBASIC-1.25□□□□□ -2.61
UBA52P62987 AC126544.2-201ENST00000625174 749 ntBASIC-1.25□□□□□ -2.61
UBA52P62987 SNORA24-201ENST00000384096 131 ntBASIC-1.26□□□□□ -2.61
UBA52P62987 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.26□□□□□ -2.61
UBA52P62987 Y_RNA.472-201ENST00000384322 102 ntBASIC-1.26□□□□□ -2.61
UBA52P62987 MTCYBP4-201ENST00000401524 249 ntBASIC-1.26□□□□□ -2.61
UBA52P62987 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.26□□□□□ -2.61
UBA52P62987 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.26□□□□□ -2.61
UBA52P62987 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.26□□□□□ -2.61
UBA52P62987 AC005828.6-201ENST00000606610 232 ntBASIC-1.26□□□□□ -2.61
UBA52P62987 AL121895.2-201ENST00000619558 447 ntBASIC-1.26□□□□□ -2.61
UBA52P62987 RNU6-324P-201ENST00000363957 106 ntBASIC-1.27□□□□□ -2.61
UBA52P62987 Y_RNA.367-201ENST00000365544 101 ntBASIC-1.27□□□□□ -2.61
UBA52P62987 SNORD38B-201ENST00000384690 67 ntBASIC-1.27□□□□□ -2.61
UBA52P62987 SNORD93-201ENST00000408813 74 ntBASIC-1.27□□□□□ -2.61
UBA52P62987 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.27□□□□□ -2.61
UBA52P62987 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.27□□□□□ -2.61
UBA52P62987 HSPE1P23-201ENST00000509838 286 ntBASIC-1.27□□□□□ -2.61
UBA52P62987 AC021146.6-201ENST00000514659 117 ntBASIC-1.27□□□□□ -2.61
UBA52P62987 SNORA25.13-201ENST00000516395 103 ntBASIC-1.27□□□□□ -2.61
UBA52P62987 RNA5SP461-201ENST00000516451 104 ntBASIC-1.27□□□□□ -2.61
UBA52P62987 SNORA27.4-201ENST00000516650 95 ntBASIC-1.27□□□□□ -2.61
UBA52P62987 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.27□□□□□ -2.61
UBA52P62987 AC104010.1-201ENST00000616889 150 ntBASIC-1.27□□□□□ -2.61
UBA52P62987 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.27□□□□□ -2.61
UBA52P62987 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.27□□□□□ -2.61
UBA52P62987 AC073869.9-201ENST00000641610 120 ntBASIC-1.27□□□□□ -2.61
UBA52P62987 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.28□□□□□ -2.61
UBA52P62987 RNU6-784P-201ENST00000384330 106 ntBASIC-1.28□□□□□ -2.61
UBA52P62987 RNU6-131P-201ENST00000391144 107 ntBASIC-1.28□□□□□ -2.61
UBA52P62987 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.28□□□□□ -2.61
UBA52P62987 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.28□□□□□ -2.61
UBA52P62987 MIR4775-201ENST00000581168 75 ntBASIC-1.28□□□□□ -2.61
UBA52P62987 Z97988.1-201ENST00000637697 135 ntBASIC-1.28□□□□□ -2.61
UBA52P62987 RNU6-490P-201ENST00000362985 107 ntBASIC-1.29□□□□□ -2.62
UBA52P62987 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.29□□□□□ -2.62
UBA52P62987 RNU6-708P-201ENST00000384217 107 ntBASIC-1.29□□□□□ -2.62
UBA52P62987 RNU6-535P-201ENST00000384722 107 ntBASIC-1.29□□□□□ -2.62
UBA52P62987 MIR516B1-201ENST00000385211 90 ntBASIC-1.29□□□□□ -2.62
UBA52P62987 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.29□□□□□ -2.62
UBA52P62987 AL008987.1-201ENST00000415528 237 ntBASIC-1.29□□□□□ -2.62
UBA52P62987 BX276092.1-201ENST00000427368 251 ntBASIC-1.29□□□□□ -2.62
UBA52P62987 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.29□□□□□ -2.62
UBA52P62987 MTCO3P38-201ENST00000468910 766 ntBASIC-1.29□□□□□ -2.62
UBA52P62987 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.29□□□□□ -2.62
UBA52P62987 AC131281.1-201ENST00000522984 164 ntBASIC-1.29□□□□□ -2.62
UBA52P62987 MTND5P34-201ENST00000568888 325 ntBASIC-1.29□□□□□ -2.62
UBA52P62987 U6.114-201ENST00000636407 96 ntBASIC-1.29□□□□□ -2.62
UBA52P62987 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.3□□□□□ -2.62
UBA52P62987 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.3□□□□□ -2.62
UBA52P62987 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.3□□□□□ -2.62
UBA52P62987 SNORA1.2-201ENST00000365189 134 ntBASIC-1.3□□□□□ -2.62
UBA52P62987 RNU6-926P-201ENST00000384075 107 ntBASIC-1.3□□□□□ -2.62
UBA52P62987 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.3□□□□□ -2.62
UBA52P62987 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
UBA52P62987 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.3□□□□□ -2.62
UBA52P62987 AC236972.2-201ENST00000434979 310 ntBASIC-1.3□□□□□ -2.62
UBA52P62987 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.3□□□□□ -2.62
UBA52P62987 RNU2-11P-201ENST00000459191 187 ntBASIC-1.3□□□□□ -2.62
UBA52P62987 AC112204.1-201ENST00000502591 103 ntBASIC-1.3□□□□□ -2.62
UBA52P62987 AC011352.1-201ENST00000512300 793 ntBASIC-1.3□□□□□ -2.62
UBA52P62987 RNU6-107P-201ENST00000516643 102 ntBASIC-1.3□□□□□ -2.62
UBA52P62987 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.3□□□□□ -2.62
UBA52P62987 AC090616.2-202ENST00000584248 222 ntBASIC-1.3□□□□□ -2.62
UBA52P62987 AL133255.1-201ENST00000606374 441 ntBASIC-1.3□□□□□ -2.62
UBA52P62987 AL136370.1-201ENST00000608166 691 ntBASIC-1.3□□□□□ -2.62
UBA52P62987 MIR8055-201ENST00000610739 97 ntBASIC-1.3□□□□□ -2.62
UBA52P62987 AL596211.1-201ENST00000569873 2277 ntBASIC-1.31□□□□□ -2.62
UBA52P62987 RNU4-16P-201ENST00000364737 141 ntBASIC-1.31□□□□□ -2.62
UBA52P62987 RNU6-169P-201ENST00000365336 107 ntBASIC-1.31□□□□□ -2.62
UBA52P62987 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.31□□□□□ -2.62
UBA52P62987 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.31□□□□□ -2.62
UBA52P62987 MIR1285-2-201ENST00000408311 88 ntBASIC-1.31□□□□□ -2.62
UBA52P62987 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.31□□□□□ -2.62
UBA52P62987 AC073464.1-201ENST00000429823 534 ntBASIC-1.31□□□□□ -2.62
UBA52P62987 UQCRBP2-201ENST00000447827 297 ntBASIC-1.31□□□□□ -2.62
UBA52P62987 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.31□□□□□ -2.62
UBA52P62987 MIR4441-201ENST00000582623 100 ntBASIC-1.31□□□□□ -2.62
UBA52P62987 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.31□□□□□ -2.62
UBA52P62987 U6.115-201ENST00000636045 103 ntBASIC-1.31□□□□□ -2.62
UBA52P62987 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.32□□□□□ -2.62
UBA52P62987 SNORD14E-201ENST00000364009 85 ntBASIC-1.32□□□□□ -2.62
UBA52P62987 SNORD115-32-201ENST00000364079 82 ntBASIC-1.32□□□□□ -2.62
UBA52P62987 RNA5SP245-201ENST00000364239 121 ntBASIC-1.32□□□□□ -2.62
UBA52P62987 SNORD116.1-201ENST00000365628 92 ntBASIC-1.32□□□□□ -2.62
UBA52P62987 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.32□□□□□ -2.62
UBA52P62987 RNU6-455P-201ENST00000384681 107 ntBASIC-1.32□□□□□ -2.62
UBA52P62987 RNU6-159P-201ENST00000391080 106 ntBASIC-1.32□□□□□ -2.62
UBA52P62987 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.32□□□□□ -2.62
UBA52P62987 AC010655.3-201ENST00000478818 450 ntBASIC-1.32□□□□□ -2.62
UBA52P62987 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.32□□□□□ -2.62
UBA52P62987 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.32□□□□□ -2.62
UBA52P62987 AP003072.1-201ENST00000531740 145 ntBASIC-1.32□□□□□ -2.62
UBA52P62987 SCOCP1-201ENST00000554676 349 ntBASIC-1.32□□□□□ -2.62
UBA52P62987 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.32□□□□□ -2.62
UBA52P62987 UBL5P4-201ENST00000562584 236 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms