Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RNU6-699P-201ENST00000517081 110 ntBASIC0.65□□□□□ -2.31
CDH4P55283 RBM11P1-201ENST00000604951 799 ntBASIC0.65□□□□□ -2.31
CDH4P55283 AL353765.1-201ENST00000605514 183 ntBASIC0.65□□□□□ -2.31
CDH4P55283 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.65□□□□□ -2.31
CDH4P55283 MIR7111-201ENST00000619751 72 ntBASIC0.65□□□□□ -2.31
CDH4P55283 AC099654.14-201ENST00000638599 341 ntBASIC0.65□□□□□ -2.31
CDH4P55283 Y_RNA.27-201ENST00000362540 103 ntBASIC0.64□□□□□ -2.31
CDH4P55283 RNA5SP264-201ENST00000363115 107 ntBASIC0.64□□□□□ -2.31
CDH4P55283 RNU6-324P-201ENST00000363957 106 ntBASIC0.64□□□□□ -2.31
CDH4P55283 Y_RNA.230-201ENST00000364348 109 ntBASIC0.64□□□□□ -2.31
CDH4P55283 MIR516B2-201ENST00000385190 85 ntBASIC0.64□□□□□ -2.31
CDH4P55283 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
CDH4P55283 AL035398.1-201ENST00000430869 322 ntBASIC0.64□□□□□ -2.31
CDH4P55283 SNORA74.3-201ENST00000517108 154 ntBASIC0.64□□□□□ -2.31
CDH4P55283 AC022616.4-201ENST00000522985 181 ntBASIC0.64□□□□□ -2.31
CDH4P55283 AC023827.1-201ENST00000569247 97 ntBASIC0.64□□□□□ -2.31
CDH4P55283 MIR4423-201ENST00000580922 80 ntBASIC0.64□□□□□ -2.31
CDH4P55283 AC005972.2-201ENST00000604690 348 ntBASIC0.64□□□□□ -2.31
CDH4P55283 AC025253.1-201ENST00000613623 543 ntBASIC0.64□□□□□ -2.31
CDH4P55283 MIR6515-201ENST00000619843 57 ntBASIC0.64□□□□□ -2.31
CDH4P55283 MIR103A2-201ENST00000362154 78 ntBASIC0.63□□□□□ -2.31
CDH4P55283 SNORD50B-201ENST00000364995 70 ntBASIC0.63□□□□□ -2.31
CDH4P55283 Y_RNA.329-201ENST00000365209 107 ntBASIC0.63□□□□□ -2.31
CDH4P55283 RNU6-1283P-201ENST00000365314 105 ntBASIC0.63□□□□□ -2.31
CDH4P55283 SNORA72-201ENST00000384339 132 ntBASIC0.63□□□□□ -2.31
CDH4P55283 RNU6-1297P-201ENST00000384415 104 ntBASIC0.63□□□□□ -2.31
CDH4P55283 Y_RNA.570-201ENST00000384750 101 ntBASIC0.63□□□□□ -2.31
CDH4P55283 RNY4P36-201ENST00000391116 96 ntBASIC0.63□□□□□ -2.31
CDH4P55283 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.63□□□□□ -2.31
CDH4P55283 MIR1185-1-201ENST00000408598 86 ntBASIC0.63□□□□□ -2.31
CDH4P55283 RNU6-733P-201ENST00000410759 104 ntBASIC0.63□□□□□ -2.31
CDH4P55283 MCFD2P1-201ENST00000417812 300 ntBASIC0.63□□□□□ -2.31
CDH4P55283 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.63□□□□□ -2.31
CDH4P55283 AC099799.1-201ENST00000439809 192 ntBASIC0.63□□□□□ -2.31
CDH4P55283 RNU7-41P-201ENST00000515917 61 ntBASIC0.63□□□□□ -2.31
CDH4P55283 SNORD45.4-201ENST00000516629 73 ntBASIC0.63□□□□□ -2.31
CDH4P55283 Y_RNA.718-201ENST00000517110 102 ntBASIC0.63□□□□□ -2.31
CDH4P55283 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
CDH4P55283 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
CDH4P55283 Y_RNA.142-201ENST00000363491 102 ntBASIC0.62□□□□□ -2.31
CDH4P55283 RNU6-1175P-201ENST00000365200 107 ntBASIC0.62□□□□□ -2.31
CDH4P55283 RNU6-1335P-201ENST00000365426 107 ntBASIC0.62□□□□□ -2.31
CDH4P55283 Y_RNA.387-201ENST00000383918 102 ntBASIC0.62□□□□□ -2.31
CDH4P55283 RNU6-1040P-201ENST00000383974 107 ntBASIC0.62□□□□□ -2.31
CDH4P55283 Y_RNA.463-201ENST00000384271 102 ntBASIC0.62□□□□□ -2.31
CDH4P55283 MIR136-201ENST00000385207 82 ntBASIC0.62□□□□□ -2.31
CDH4P55283 RN7SKP295-201ENST00000517264 153 ntBASIC0.62□□□□□ -2.31
CDH4P55283 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.62□□□□□ -2.31
CDH4P55283 VN1R91P-201ENST00000594377 169 ntBASIC0.62□□□□□ -2.31
CDH4P55283 AC091925.1-201ENST00000623204 462 ntBASIC0.62□□□□□ -2.31
CDH4P55283 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.62□□□□□ -2.31
CDH4P55283 MIR4272-201ENST00000635924 64 ntBASIC0.62□□□□□ -2.31
CDH4P55283 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CDH4P55283 SNORD81.1-201ENST00000363064 77 ntBASIC0.61□□□□□ -2.31
CDH4P55283 SNORA25.3-201ENST00000363205 127 ntBASIC0.61□□□□□ -2.31
CDH4P55283 Y_RNA.259-201ENST00000364619 101 ntBASIC0.61□□□□□ -2.31
CDH4P55283 Y_RNA.310-201ENST00000365063 113 ntBASIC0.61□□□□□ -2.31
CDH4P55283 RNU6-1323P-201ENST00000384025 107 ntBASIC0.61□□□□□ -2.31
CDH4P55283 Y_RNA.496-201ENST00000384444 101 ntBASIC0.61□□□□□ -2.31
CDH4P55283 MIR628-201ENST00000385229 95 ntBASIC0.61□□□□□ -2.31
CDH4P55283 AL390729.2-201ENST00000416137 156 ntBASIC0.61□□□□□ -2.31
CDH4P55283 MLLT10P1-201ENST00000418346 262 ntBASIC0.61□□□□□ -2.31
CDH4P55283 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.61□□□□□ -2.31
CDH4P55283 SNRPGP10-201ENST00000432323 225 ntBASIC0.61□□□□□ -2.31
CDH4P55283 COX6CP6-201ENST00000490840 228 ntBASIC0.61□□□□□ -2.31
CDH4P55283 AC091951.2-201ENST00000500762 203 ntBASIC0.61□□□□□ -2.31
CDH4P55283 AC004817.2-201ENST00000561794 651 ntBASIC0.61□□□□□ -2.31
CDH4P55283 MIR4764-201ENST00000580680 88 ntBASIC0.61□□□□□ -2.31
CDH4P55283 AC131055.1-201ENST00000584626 316 ntBASIC0.61□□□□□ -2.31
CDH4P55283 AL132765.2-201ENST00000610812 351 ntBASIC0.61□□□□□ -2.31
CDH4P55283 AC133104.2-201ENST00000615272 193 ntBASIC0.61□□□□□ -2.31
CDH4P55283 AC084781.2-201ENST00000615568 161 ntBASIC0.61□□□□□ -2.31
CDH4P55283 AC010205.1-201ENST00000616668 449 ntBASIC0.61□□□□□ -2.31
CDH4P55283 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
CDH4P55283 RNY1-201ENST00000364228 113 ntBASIC0.6□□□□□ -2.31
CDH4P55283 RNU1-133P-201ENST00000364867 167 ntBASIC0.6□□□□□ -2.31
CDH4P55283 RNU6-110P-201ENST00000384508 104 ntBASIC0.6□□□□□ -2.31
CDH4P55283 MIR520C-201ENST00000385005 87 ntBASIC0.6□□□□□ -2.31
CDH4P55283 SNORD89-201ENST00000390981 114 ntBASIC0.6□□□□□ -2.31
CDH4P55283 RNU7-152P-201ENST00000458982 64 ntBASIC0.6□□□□□ -2.31
CDH4P55283 AC113410.1-201ENST00000505029 247 ntBASIC0.6□□□□□ -2.31
CDH4P55283 RN7SKP164-201ENST00000516138 266 ntBASIC0.6□□□□□ -2.31
CDH4P55283 SNORA18.7-201ENST00000516910 131 ntBASIC0.6□□□□□ -2.31
CDH4P55283 AC006600.1-201ENST00000572529 153 ntBASIC0.6□□□□□ -2.31
CDH4P55283 SEPT14P17-201ENST00000617978 177 ntBASIC0.6□□□□□ -2.31
CDH4P55283 RNU6-1084P-201ENST00000362498 107 ntBASIC0.59□□□□□ -2.31
CDH4P55283 snoU2-30.1-201ENST00000365012 70 ntBASIC0.59□□□□□ -2.31
CDH4P55283 RNU6-131P-201ENST00000391144 107 ntBASIC0.59□□□□□ -2.31
CDH4P55283 AL590004.1-201ENST00000405321 300 ntBASIC0.59□□□□□ -2.31
CDH4P55283 RNU6-855P-201ENST00000410395 104 ntBASIC0.59□□□□□ -2.31
CDH4P55283 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.59□□□□□ -2.31
CDH4P55283 AF228730.4-201ENST00000421457 183 ntBASIC0.59□□□□□ -2.31
CDH4P55283 AC005042.3-201ENST00000453230 174 ntBASIC0.59□□□□□ -2.31
CDH4P55283 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.59□□□□□ -2.31
CDH4P55283 U8.19-201ENST00000459095 133 ntBASIC0.59□□□□□ -2.31
CDH4P55283 SNORD123-201ENST00000459473 70 ntBASIC0.59□□□□□ -2.31
CDH4P55283 RNA5SP436-201ENST00000516020 115 ntBASIC0.59□□□□□ -2.31
CDH4P55283 AC109810.1-201ENST00000534066 224 ntBASIC0.59□□□□□ -2.31
CDH4P55283 UBE2V2P2-201ENST00000587677 504 ntBASIC0.59□□□□□ -2.31
CDH4P55283 7SK.10-201ENST00000621414 298 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms