Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 SUB1P4-201ENST00000566062 339 ntBASIC1.91□□□□□ -2.1
PMS2P54278 AC024614.2-201ENST00000577584 372 ntBASIC1.91□□□□□ -2.1
PMS2P54278 AC091178.2-201ENST00000584401 117 ntBASIC1.91□□□□□ -2.1
PMS2P54278 POLR3GP1-201ENST00000594073 261 ntBASIC1.91□□□□□ -2.1
PMS2P54278 AP000942.3-201ENST00000603702 160 ntBASIC1.91□□□□□ -2.1
PMS2P54278 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.91□□□□□ -2.1
PMS2P54278 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
PMS2P54278 RNU6-862P-201ENST00000362804 105 ntBASIC1.9□□□□□ -2.11
PMS2P54278 SNORA72-201ENST00000384339 132 ntBASIC1.9□□□□□ -2.11
PMS2P54278 MIR520G-201ENST00000385064 90 ntBASIC1.9□□□□□ -2.11
PMS2P54278 SNORA36B-201ENST00000410438 131 ntBASIC1.9□□□□□ -2.11
PMS2P54278 RNA5SP100-201ENST00000410903 110 ntBASIC1.9□□□□□ -2.11
PMS2P54278 RNA5SP59-201ENST00000410922 110 ntBASIC1.9□□□□□ -2.11
PMS2P54278 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.9□□□□□ -2.11
PMS2P54278 MTND5P15-201ENST00000434246 349 ntBASIC1.9□□□□□ -2.11
PMS2P54278 HSPE1P21-201ENST00000438283 308 ntBASIC1.9□□□□□ -2.11
PMS2P54278 AC010409.1-201ENST00000487382 476 ntBASIC1.9□□□□□ -2.11
PMS2P54278 AC117454.1-201ENST00000491120 168 ntBASIC1.9□□□□□ -2.11
PMS2P54278 RNA5SP182-201ENST00000516064 82 ntBASIC1.9□□□□□ -2.11
PMS2P54278 RNU1-142P-201ENST00000516682 145 ntBASIC1.9□□□□□ -2.11
PMS2P54278 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.9□□□□□ -2.11
PMS2P54278 MIR4419B-201ENST00000577260 68 ntBASIC1.9□□□□□ -2.11
PMS2P54278 MIR4713-201ENST00000582691 75 ntBASIC1.9□□□□□ -2.11
PMS2P54278 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.9□□□□□ -2.11
PMS2P54278 FTX_2.1-201ENST00000618816 94 ntBASIC1.9□□□□□ -2.11
PMS2P54278 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.9□□□□□ -2.11
PMS2P54278 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
PMS2P54278 Y_RNA.140-201ENST00000363474 103 ntBASIC1.89□□□□□ -2.11
PMS2P54278 RNU6-1205P-201ENST00000363625 106 ntBASIC1.89□□□□□ -2.11
PMS2P54278 Y_RNA.338-201ENST00000365320 114 ntBASIC1.89□□□□□ -2.11
PMS2P54278 Y_RNA.793-201ENST00000411222 111 ntBASIC1.89□□□□□ -2.11
PMS2P54278 MIR4308-201ENST00000580634 81 ntBASIC1.89□□□□□ -2.11
PMS2P54278 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.89□□□□□ -2.11
PMS2P54278 AC072026.1-201ENST00000605023 201 ntBASIC1.89□□□□□ -2.11
PMS2P54278 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.89□□□□□ -2.11
PMS2P54278 Y_RNA.802-201ENST00000614892 130 ntBASIC1.89□□□□□ -2.11
PMS2P54278 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.89□□□□□ -2.11
PMS2P54278 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.89□□□□□ -2.11
PMS2P54278 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
PMS2P54278 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
PMS2P54278 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
PMS2P54278 RNU6-1020P-201ENST00000363684 107 ntBASIC1.88□□□□□ -2.11
PMS2P54278 RNU6-1019P-201ENST00000364424 107 ntBASIC1.88□□□□□ -2.11
PMS2P54278 SNORD48-201ENST00000364953 64 ntBASIC1.88□□□□□ -2.11
PMS2P54278 RNU6-47P-201ENST00000383866 107 ntBASIC1.88□□□□□ -2.11
PMS2P54278 Y_RNA.555-201ENST00000384673 110 ntBASIC1.88□□□□□ -2.11
PMS2P54278 SNORA8.3-201ENST00000384679 139 ntBASIC1.88□□□□□ -2.11
PMS2P54278 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.88□□□□□ -2.11
PMS2P54278 RNU6-1186P-201ENST00000410429 97 ntBASIC1.88□□□□□ -2.11
PMS2P54278 CYCSP49-201ENST00000420810 319 ntBASIC1.88□□□□□ -2.11
PMS2P54278 AC069257.2-201ENST00000441819 155 ntBASIC1.88□□□□□ -2.11
PMS2P54278 RPS4XP11-201ENST00000446897 772 ntBASIC1.88□□□□□ -2.11
PMS2P54278 RNY3P16-201ENST00000516338 101 ntBASIC1.88□□□□□ -2.11
PMS2P54278 AL358944.1-201ENST00000528537 144 ntBASIC1.88□□□□□ -2.11
PMS2P54278 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.88□□□□□ -2.11
PMS2P54278 AC022254.1-201ENST00000567857 235 ntBASIC1.88□□□□□ -2.11
PMS2P54278 AC073413.2-201ENST00000604332 360 ntBASIC1.88□□□□□ -2.11
PMS2P54278 AC018630.2-201ENST00000534866 2403 ntBASIC1.88□□□□□ -2.11
PMS2P54278 RNU1-17P-201ENST00000363022 152 ntBASIC1.87□□□□□ -2.11
PMS2P54278 Y_RNA.121-201ENST00000363309 113 ntBASIC1.87□□□□□ -2.11
PMS2P54278 SNORA33-201ENST00000363664 130 ntBASIC1.87□□□□□ -2.11
PMS2P54278 RNU4-13P-201ENST00000364019 141 ntBASIC1.87□□□□□ -2.11
PMS2P54278 Y_RNA.308-201ENST00000365043 101 ntBASIC1.87□□□□□ -2.11
PMS2P54278 RNU6-376P-201ENST00000384731 106 ntBASIC1.87□□□□□ -2.11
PMS2P54278 MIR562-201ENST00000384894 95 ntBASIC1.87□□□□□ -2.11
PMS2P54278 RNU6-381P-201ENST00000391259 108 ntBASIC1.87□□□□□ -2.11
PMS2P54278 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.87□□□□□ -2.11
PMS2P54278 AL445685.2-201ENST00000422551 342 ntBASIC1.87□□□□□ -2.11
PMS2P54278 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.87□□□□□ -2.11
PMS2P54278 RNU7-94P-201ENST00000459576 63 ntBASIC1.87□□□□□ -2.11
PMS2P54278 AL163195.1-201ENST00000496941 348 ntBASIC1.87□□□□□ -2.11
PMS2P54278 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.87□□□□□ -2.11
PMS2P54278 RNU6-341P-201ENST00000516973 96 ntBASIC1.87□□□□□ -2.11
PMS2P54278 AC100821.1-201ENST00000523153 2479 ntBASIC1.87□□□□□ -2.11
PMS2P54278 AP002392.1-201ENST00000537692 208 ntBASIC1.87□□□□□ -2.11
PMS2P54278 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.87□□□□□ -2.11
PMS2P54278 MIR6079-201ENST00000635807 62 ntBASIC1.87□□□□□ -2.11
PMS2P54278 RNU6-112P-201ENST00000363599 104 ntBASIC1.86□□□□□ -2.11
PMS2P54278 Y_RNA.238-201ENST00000364441 102 ntBASIC1.86□□□□□ -2.11
PMS2P54278 Y_RNA.293-201ENST00000364908 93 ntBASIC1.86□□□□□ -2.11
PMS2P54278 RNU6-136P-201ENST00000384663 107 ntBASIC1.86□□□□□ -2.11
PMS2P54278 MIR520A-201ENST00000384862 85 ntBASIC1.86□□□□□ -2.11
PMS2P54278 MIR1278-201ENST00000408753 81 ntBASIC1.86□□□□□ -2.11
PMS2P54278 COX6CP10-201ENST00000416832 224 ntBASIC1.86□□□□□ -2.11
PMS2P54278 PIGPP3-201ENST00000425307 415 ntBASIC1.86□□□□□ -2.11
PMS2P54278 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.86□□□□□ -2.11
PMS2P54278 RNU6-437P-201ENST00000459408 95 ntBASIC1.86□□□□□ -2.11
PMS2P54278 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.86□□□□□ -2.11
PMS2P54278 AC107393.1-201ENST00000512403 346 ntBASIC1.86□□□□□ -2.11
PMS2P54278 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PMS2P54278 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PMS2P54278 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PMS2P54278 Y_RNA.7-201ENST00000362352 102 ntBASIC1.85□□□□□ -2.11
PMS2P54278 RNU6-682P-201ENST00000363843 106 ntBASIC1.85□□□□□ -2.11
PMS2P54278 Y_RNA.180-201ENST00000363867 113 ntBASIC1.85□□□□□ -2.11
PMS2P54278 Y_RNA.233-201ENST00000364407 101 ntBASIC1.85□□□□□ -2.11
PMS2P54278 RNU6-923P-201ENST00000364753 107 ntBASIC1.85□□□□□ -2.11
PMS2P54278 RNU4-17P-201ENST00000365598 141 ntBASIC1.85□□□□□ -2.11
PMS2P54278 RNA5SP496-201ENST00000391240 109 ntBASIC1.85□□□□□ -2.11
PMS2P54278 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms