Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC009779.6-201ENST00000603972 165 ntBASIC1.51□□□□□ -2.17
LIMK2P53671 AC011921.3-201ENST00000605540 361 ntBASIC1.51□□□□□ -2.17
LIMK2P53671 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.51□□□□□ -2.17
LIMK2P53671 snoU18.1-201ENST00000629629 71 ntBASIC1.51□□□□□ -2.17
LIMK2P53671 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.51□□□□□ -2.17
LIMK2P53671 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
LIMK2P53671 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LIMK2P53671 MIR337-201ENST00000362281 93 ntBASIC1.5□□□□□ -2.17
LIMK2P53671 Y_RNA.287-201ENST00000364853 94 ntBASIC1.5□□□□□ -2.17
LIMK2P53671 RNU6-407P-201ENST00000365280 104 ntBASIC1.5□□□□□ -2.17
LIMK2P53671 RNU6-763P-201ENST00000390865 106 ntBASIC1.5□□□□□ -2.17
LIMK2P53671 RNU6-360P-201ENST00000390944 104 ntBASIC1.5□□□□□ -2.17
LIMK2P53671 SNORA26.5-201ENST00000391215 123 ntBASIC1.5□□□□□ -2.17
LIMK2P53671 MIR1323-201ENST00000408090 73 ntBASIC1.5□□□□□ -2.17
LIMK2P53671 MIR1304-201ENST00000408243 91 ntBASIC1.5□□□□□ -2.17
LIMK2P53671 MIR1253-201ENST00000408273 105 ntBASIC1.5□□□□□ -2.17
LIMK2P53671 Y_RNA.590-201ENST00000410140 107 ntBASIC1.5□□□□□ -2.17
LIMK2P53671 RNU6-855P-201ENST00000410395 104 ntBASIC1.5□□□□□ -2.17
LIMK2P53671 HSPE1P9-201ENST00000440046 311 ntBASIC1.5□□□□□ -2.17
LIMK2P53671 AC023790.1-201ENST00000482174 347 ntBASIC1.5□□□□□ -2.17
LIMK2P53671 RPL36AP21-201ENST00000490372 323 ntBASIC1.5□□□□□ -2.17
LIMK2P53671 AC005840.1-201ENST00000498412 377 ntBASIC1.5□□□□□ -2.17
LIMK2P53671 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.5□□□□□ -2.17
LIMK2P53671 TRMT112P2-201ENST00000512910 132 ntBASIC1.5□□□□□ -2.17
LIMK2P53671 SNORD116-28-201ENST00000516123 91 ntBASIC1.5□□□□□ -2.17
LIMK2P53671 RNU6-1337P-201ENST00000516525 95 ntBASIC1.5□□□□□ -2.17
LIMK2P53671 RNA5SP437-201ENST00000517249 129 ntBASIC1.5□□□□□ -2.17
LIMK2P53671 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.5□□□□□ -2.17
LIMK2P53671 AL008718.3-201ENST00000610217 321 ntBASIC1.5□□□□□ -2.17
LIMK2P53671 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.5□□□□□ -2.17
LIMK2P53671 RNY1P10-201ENST00000363268 113 ntBASIC1.49□□□□□ -2.17
LIMK2P53671 RNU1-22P-201ENST00000363334 158 ntBASIC1.49□□□□□ -2.17
LIMK2P53671 RNU6-414P-201ENST00000363705 104 ntBASIC1.49□□□□□ -2.17
LIMK2P53671 Y_RNA.292-201ENST00000364904 97 ntBASIC1.49□□□□□ -2.17
LIMK2P53671 Y_RNA.341-201ENST00000365341 102 ntBASIC1.49□□□□□ -2.17
LIMK2P53671 RNU6-117P-201ENST00000365415 107 ntBASIC1.49□□□□□ -2.17
LIMK2P53671 Y_RNA.456-201ENST00000384232 111 ntBASIC1.49□□□□□ -2.17
LIMK2P53671 SNORD116-13-201ENST00000384408 92 ntBASIC1.49□□□□□ -2.17
LIMK2P53671 Y_RNA.515-201ENST00000384535 112 ntBASIC1.49□□□□□ -2.17
LIMK2P53671 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.49□□□□□ -2.17
LIMK2P53671 FTH1P12-201ENST00000432137 551 ntBASIC1.49□□□□□ -2.17
LIMK2P53671 HSPE1P13-201ENST00000451143 297 ntBASIC1.49□□□□□ -2.17
LIMK2P53671 RNU1-98P-201ENST00000458992 160 ntBASIC1.49□□□□□ -2.17
LIMK2P53671 RPS27P22-201ENST00000478056 241 ntBASIC1.49□□□□□ -2.17
LIMK2P53671 AC130289.1-201ENST00000577321 73 ntBASIC1.49□□□□□ -2.17
LIMK2P53671 AL442067.1-201ENST00000613261 223 ntBASIC1.49□□□□□ -2.17
LIMK2P53671 AL078604.3-201ENST00000615580 211 ntBASIC1.49□□□□□ -2.17
LIMK2P53671 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.49□□□□□ -2.17
LIMK2P53671 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
LIMK2P53671 AC068700.1-201ENST00000565862 3754 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.48□□□□□ -2.17
LIMK2P53671 MIR126-201ENST00000362291 85 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 RNU6-1048P-201ENST00000364054 107 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 RNY4P28-201ENST00000365281 93 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 RNU6-211P-201ENST00000384047 107 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 SNORA72.4-201ENST00000384174 132 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 RNU6-417P-201ENST00000384712 107 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 BTF3P11-201ENST00000426582 477 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 RPS20P10-201ENST00000451209 253 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 U8.19-201ENST00000459095 133 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.48□□□□□ -2.17
LIMK2P53671 AC097462.1-201ENST00000514125 324 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 RNU6-970P-201ENST00000516312 107 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 Y_RNA.679-201ENST00000516416 91 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 RNU6-63P-201ENST00000516690 95 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 SNORA31.24-201ENST00000517232 57 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 RNU7-128P-201ENST00000517247 62 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 AC024995.1-201ENST00000523014 93 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.48□□□□□ -2.17
LIMK2P53671 AL137100.2-201ENST00000555786 315 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 MIR3668-201ENST00000582138 75 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 MIR4438-201ENST00000585271 93 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 AC004832.4-201ENST00000608952 331 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 U6.73-201ENST00000619194 103 ntBASIC1.48□□□□□ -2.17
LIMK2P53671 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
LIMK2P53671 SNORA33-201ENST00000363664 130 ntBASIC1.47□□□□□ -2.17
LIMK2P53671 Y_RNA.274-201ENST00000364714 101 ntBASIC1.47□□□□□ -2.17
LIMK2P53671 RNU6-200P-201ENST00000364743 107 ntBASIC1.47□□□□□ -2.17
LIMK2P53671 MIR1298-201ENST00000408783 112 ntBASIC1.47□□□□□ -2.17
LIMK2P53671 AC104332.1-201ENST00000440471 797 ntBASIC1.47□□□□□ -2.17
LIMK2P53671 AC009474.2-201ENST00000451383 136 ntBASIC1.47□□□□□ -2.17
LIMK2P53671 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.47□□□□□ -2.17
LIMK2P53671 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.47□□□□□ -2.17
LIMK2P53671 RNU6-138P-201ENST00000515952 107 ntBASIC1.47□□□□□ -2.17
LIMK2P53671 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.47□□□□□ -2.17
LIMK2P53671 AC015720.1-201ENST00000565251 277 ntBASIC1.47□□□□□ -2.17
LIMK2P53671 AC073349.3-201ENST00000617616 186 ntBASIC1.47□□□□□ -2.17
LIMK2P53671 U6.108-201ENST00000637764 58 ntBASIC1.47□□□□□ -2.17
LIMK2P53671 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
LIMK2P53671 AC134026.1-201ENST00000623249 2239 ntBASIC1.46□□□□□ -2.18
LIMK2P53671 Y_RNA.200-201ENST00000364018 102 ntBASIC1.46□□□□□ -2.18
LIMK2P53671 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.46□□□□□ -2.18
LIMK2P53671 RNA5SP467-201ENST00000391274 118 ntBASIC1.46□□□□□ -2.18
LIMK2P53671 MIR1267-201ENST00000408723 78 ntBASIC1.46□□□□□ -2.18
LIMK2P53671 RNA5SP511-201ENST00000410487 115 ntBASIC1.46□□□□□ -2.18
LIMK2P53671 Y_RNA.626-201ENST00000411288 95 ntBASIC1.46□□□□□ -2.18
LIMK2P53671 AC004965.1-201ENST00000413033 213 ntBASIC1.46□□□□□ -2.18
LIMK2P53671 JTBP1-201ENST00000441314 247 ntBASIC1.46□□□□□ -2.18
LIMK2P53671 snoU13.9-201ENST00000458927 103 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms