Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC092794.2-201ENST00000620933 563 ntBASIC0.42□□□□□ -2.34
ACLYP53396 MIR1244-3-201ENST00000635744 85 ntBASIC0.42□□□□□ -2.34
ACLYP53396 MIR1244-2-201ENST00000636449 85 ntBASIC0.42□□□□□ -2.34
ACLYP53396 MIR1244-4-202ENST00000636813 85 ntBASIC0.42□□□□□ -2.34
ACLYP53396 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
ACLYP53396 AC134026.1-201ENST00000623249 2239 ntBASIC0.41□□□□□ -2.34
ACLYP53396 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.41□□□□□ -2.34
ACLYP53396 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
ACLYP53396 Y_RNA.172-201ENST00000363765 102 ntBASIC0.41□□□□□ -2.34
ACLYP53396 RNU6-654P-201ENST00000364373 107 ntBASIC0.41□□□□□ -2.34
ACLYP53396 Y_RNA.453-201ENST00000384223 109 ntBASIC0.41□□□□□ -2.34
ACLYP53396 RNU6-601P-201ENST00000384540 107 ntBASIC0.41□□□□□ -2.34
ACLYP53396 SNORD105-201ENST00000386910 85 ntBASIC0.41□□□□□ -2.34
ACLYP53396 RNU6-510P-201ENST00000391239 108 ntBASIC0.41□□□□□ -2.34
ACLYP53396 RNA5SP222-201ENST00000411039 105 ntBASIC0.41□□□□□ -2.34
ACLYP53396 MTND3P10-201ENST00000450967 341 ntBASIC0.41□□□□□ -2.34
ACLYP53396 RPL17P19-201ENST00000489069 552 ntBASIC0.41□□□□□ -2.34
ACLYP53396 AC005899.2-201ENST00000584353 90 ntBASIC0.41□□□□□ -2.34
ACLYP53396 AC023932.2-201ENST00000603176 175 ntBASIC0.41□□□□□ -2.34
ACLYP53396 MIR3688-2-201ENST00000636963 87 ntBASIC0.41□□□□□ -2.34
ACLYP53396 Y_RNA.101-201ENST00000363154 102 ntBASIC0.4□□□□□ -2.35
ACLYP53396 SNORD50B-201ENST00000364995 70 ntBASIC0.4□□□□□ -2.35
ACLYP53396 Y_RNA.339-201ENST00000365325 102 ntBASIC0.4□□□□□ -2.35
ACLYP53396 SNORA36.2-201ENST00000384004 127 ntBASIC0.4□□□□□ -2.35
ACLYP53396 RNU6-131P-201ENST00000391144 107 ntBASIC0.4□□□□□ -2.35
ACLYP53396 RNU2-61P-201ENST00000411069 191 ntBASIC0.4□□□□□ -2.35
ACLYP53396 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.4□□□□□ -2.35
ACLYP53396 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.4□□□□□ -2.35
ACLYP53396 AC011352.1-201ENST00000512300 793 ntBASIC0.4□□□□□ -2.35
ACLYP53396 AC240442.1-201ENST00000616055 283 ntBASIC0.4□□□□□ -2.35
ACLYP53396 U4.5-201ENST00000617137 123 ntBASIC0.4□□□□□ -2.35
ACLYP53396 MIR6516-201ENST00000630554 81 ntBASIC0.4□□□□□ -2.35
ACLYP53396 MIR4251-201ENST00000635819 61 ntBASIC0.4□□□□□ -2.35
ACLYP53396 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.4□□□□□ -2.35
ACLYP53396 Y_RNA.436-201ENST00000384097 102 ntBASIC0.39□□□□□ -2.35
ACLYP53396 Y_RNA.482-201ENST00000384377 111 ntBASIC0.39□□□□□ -2.35
ACLYP53396 RNA5SP63-201ENST00000391225 112 ntBASIC0.39□□□□□ -2.35
ACLYP53396 RNU2-54P-201ENST00000410299 190 ntBASIC0.39□□□□□ -2.35
ACLYP53396 AC107399.1-201ENST00000451226 265 ntBASIC0.39□□□□□ -2.35
ACLYP53396 U8.19-201ENST00000459095 133 ntBASIC0.39□□□□□ -2.35
ACLYP53396 MIR2053-201ENST00000459295 91 ntBASIC0.39□□□□□ -2.35
ACLYP53396 RN7SKP12-201ENST00000516275 143 ntBASIC0.39□□□□□ -2.35
ACLYP53396 RNU6-720P-201ENST00000516363 108 ntBASIC0.39□□□□□ -2.35
ACLYP53396 MIR4300-201ENST00000581016 96 ntBASIC0.39□□□□□ -2.35
ACLYP53396 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.39□□□□□ -2.35
ACLYP53396 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.39□□□□□ -2.35
ACLYP53396 RNU6-99P-201ENST00000364721 107 ntBASIC0.38□□□□□ -2.35
ACLYP53396 SNORA2B-201ENST00000384583 137 ntBASIC0.38□□□□□ -2.35
ACLYP53396 SNORD115-47-201ENST00000391226 86 ntBASIC0.38□□□□□ -2.35
ACLYP53396 MTND3P8-201ENST00000412909 339 ntBASIC0.38□□□□□ -2.35
ACLYP53396 MTND4P28-201ENST00000426217 387 ntBASIC0.38□□□□□ -2.35
ACLYP53396 CHEK2P4-201ENST00000450340 246 ntBASIC0.38□□□□□ -2.35
ACLYP53396 RNU6-307P-201ENST00000516743 106 ntBASIC0.38□□□□□ -2.35
ACLYP53396 AC005972.2-201ENST00000604690 348 ntBASIC0.38□□□□□ -2.35
ACLYP53396 Y_RNA.3-201ENST00000362331 103 ntBASIC0.37□□□□□ -2.35
ACLYP53396 Y_RNA.86-201ENST00000363020 111 ntBASIC0.37□□□□□ -2.35
ACLYP53396 Y_RNA.88-201ENST00000363029 99 ntBASIC0.37□□□□□ -2.35
ACLYP53396 RNY1P8-201ENST00000383970 114 ntBASIC0.37□□□□□ -2.35
ACLYP53396 RNU6-926P-201ENST00000384075 107 ntBASIC0.37□□□□□ -2.35
ACLYP53396 SNORA72-201ENST00000384339 132 ntBASIC0.37□□□□□ -2.35
ACLYP53396 RNU6-613P-201ENST00000410412 108 ntBASIC0.37□□□□□ -2.35
ACLYP53396 RNU6-1199P-201ENST00000411249 104 ntBASIC0.37□□□□□ -2.35
ACLYP53396 AC016907.1-201ENST00000419483 435 ntBASIC0.37□□□□□ -2.35
ACLYP53396 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.37□□□□□ -2.35
ACLYP53396 AC093534.1-201ENST00000504977 132 ntBASIC0.37□□□□□ -2.35
ACLYP53396 AC116353.2-201ENST00000505332 712 ntBASIC0.37□□□□□ -2.35
ACLYP53396 RNU6-1012P-201ENST00000516606 109 ntBASIC0.37□□□□□ -2.35
ACLYP53396 Y_RNA.714-201ENST00000517065 90 ntBASIC0.37□□□□□ -2.35
ACLYP53396 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.37□□□□□ -2.35
ACLYP53396 AL355073.2-201ENST00000612106 557 ntBASIC0.37□□□□□ -2.35
ACLYP53396 AC090517.2-201ENST00000614966 680 ntBASIC0.37□□□□□ -2.35
ACLYP53396 PISRT1.1-201ENST00000616930 107 ntBASIC0.37□□□□□ -2.35
ACLYP53396 AC087588.2-201ENST00000617667 426 ntBASIC0.37□□□□□ -2.35
ACLYP53396 MIR1-1-201ENST00000362147 71 ntBASIC0.36□□□□□ -2.35
ACLYP53396 Y_RNA.368-201ENST00000365547 113 ntBASIC0.36□□□□□ -2.35
ACLYP53396 Y_RNA.370-201ENST00000365589 108 ntBASIC0.36□□□□□ -2.35
ACLYP53396 Y_RNA.516-201ENST00000384541 124 ntBASIC0.36□□□□□ -2.35
ACLYP53396 SNORA75.4-201ENST00000391278 119 ntBASIC0.36□□□□□ -2.35
ACLYP53396 RNA5SP95-201ENST00000410319 137 ntBASIC0.36□□□□□ -2.35
ACLYP53396 SNRPGP10-201ENST00000432323 225 ntBASIC0.36□□□□□ -2.35
ACLYP53396 MIR2115-201ENST00000516657 100 ntBASIC0.36□□□□□ -2.35
ACLYP53396 MIR548AR-201ENST00000582191 57 ntBASIC0.36□□□□□ -2.35
ACLYP53396 AC060780.3-201ENST00000589464 80 ntBASIC0.36□□□□□ -2.35
ACLYP53396 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
ACLYP53396 Y_RNA.148-201ENST00000363557 117 ntBASIC0.35□□□□□ -2.35
ACLYP53396 RNU6-324P-201ENST00000363957 106 ntBASIC0.35□□□□□ -2.35
ACLYP53396 RNU4-67P-201ENST00000364569 141 ntBASIC0.35□□□□□ -2.35
ACLYP53396 Y_RNA.280-201ENST00000364765 112 ntBASIC0.35□□□□□ -2.35
ACLYP53396 MIR140-201ENST00000385282 100 ntBASIC0.35□□□□□ -2.35
ACLYP53396 SNORA69.1-201ENST00000390904 137 ntBASIC0.35□□□□□ -2.35
ACLYP53396 SNORD28B-201ENST00000390993 75 ntBASIC0.35□□□□□ -2.35
ACLYP53396 Y_RNA.592-201ENST00000410274 109 ntBASIC0.35□□□□□ -2.35
ACLYP53396 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.35□□□□□ -2.35
ACLYP53396 FCF1P4-201ENST00000448326 183 ntBASIC0.35□□□□□ -2.35
ACLYP53396 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.35□□□□□ -2.35
ACLYP53396 RNU6-436P-201ENST00000516171 114 ntBASIC0.35□□□□□ -2.35
ACLYP53396 AC104695.3-201ENST00000604052 296 ntBASIC0.35□□□□□ -2.35
ACLYP53396 AC080013.6-201ENST00000606185 215 ntBASIC0.35□□□□□ -2.35
ACLYP53396 Y_RNA.168-201ENST00000363740 102 ntBASIC0.34□□□□□ -2.36
ACLYP53396 SNORD14E-201ENST00000364009 85 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms