Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 RNU7-116P-201ENST00000516940 62 ntBASIC0.96□□□□□ -2.26
SMSP52788 AL355375.2-201ENST00000574825 175 ntBASIC0.96□□□□□ -2.26
SMSP52788 AC103810.9-201ENST00000606688 112 ntBASIC0.96□□□□□ -2.26
SMSP52788 AC084781.2-201ENST00000615568 161 ntBASIC0.96□□□□□ -2.26
SMSP52788 PVT1_3.1-201ENST00000620853 95 ntBASIC0.96□□□□□ -2.26
SMSP52788 Y_RNA.263-201ENST00000364659 114 ntBASIC0.95□□□□□ -2.26
SMSP52788 Y_RNA.329-201ENST00000365209 107 ntBASIC0.95□□□□□ -2.26
SMSP52788 Y_RNA.368-201ENST00000365547 113 ntBASIC0.95□□□□□ -2.26
SMSP52788 MIR136-201ENST00000385207 82 ntBASIC0.95□□□□□ -2.26
SMSP52788 POLR2J4-204ENST00000418424 324 ntBASIC0.95□□□□□ -2.26
SMSP52788 HMGN2P32-201ENST00000444648 269 ntBASIC0.95□□□□□ -2.26
SMSP52788 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.95□□□□□ -2.26
SMSP52788 snoU13.25-201ENST00000458945 104 ntBASIC0.95□□□□□ -2.26
SMSP52788 RNU6-875P-201ENST00000516488 106 ntBASIC0.95□□□□□ -2.26
SMSP52788 Y_RNA.714-201ENST00000517065 90 ntBASIC0.95□□□□□ -2.26
SMSP52788 SNORA74.3-201ENST00000517108 154 ntBASIC0.95□□□□□ -2.26
SMSP52788 AP003716.2-201ENST00000528260 108 ntBASIC0.95□□□□□ -2.26
SMSP52788 AC211469.2-201ENST00000605461 205 ntBASIC0.95□□□□□ -2.26
SMSP52788 AL121655.1-201ENST00000605811 308 ntBASIC0.95□□□□□ -2.26
SMSP52788 AL020996.3-201ENST00000606617 222 ntBASIC0.95□□□□□ -2.26
SMSP52788 Y_RNA.772-201ENST00000606692 102 ntBASIC0.95□□□□□ -2.26
SMSP52788 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.95□□□□□ -2.26
SMSP52788 Y_RNA.310-201ENST00000365063 113 ntBASIC0.94□□□□□ -2.26
SMSP52788 RNU6-969P-201ENST00000383900 105 ntBASIC0.94□□□□□ -2.26
SMSP52788 Y_RNA.456-201ENST00000384232 111 ntBASIC0.94□□□□□ -2.26
SMSP52788 SNORD63-201ENST00000384262 68 ntBASIC0.94□□□□□ -2.26
SMSP52788 Y_RNA.496-201ENST00000384444 101 ntBASIC0.94□□□□□ -2.26
SMSP52788 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.94□□□□□ -2.26
SMSP52788 RNU6-976P-201ENST00000516086 111 ntBASIC0.94□□□□□ -2.26
SMSP52788 SNORD45.4-201ENST00000516629 73 ntBASIC0.94□□□□□ -2.26
SMSP52788 MIR3192-201ENST00000584920 77 ntBASIC0.94□□□□□ -2.26
SMSP52788 MIR6857-201ENST00000613267 93 ntBASIC0.94□□□□□ -2.26
SMSP52788 MIR6767-201ENST00000637302 66 ntBASIC0.94□□□□□ -2.26
SMSP52788 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SMSP52788 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SMSP52788 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
SMSP52788 Y_RNA.39-201ENST00000362620 98 ntBASIC0.93□□□□□ -2.26
SMSP52788 RNU6-1187P-201ENST00000364771 110 ntBASIC0.93□□□□□ -2.26
SMSP52788 Y_RNA.303-201ENST00000364998 94 ntBASIC0.93□□□□□ -2.26
SMSP52788 snoU2-30.1-201ENST00000365012 70 ntBASIC0.93□□□□□ -2.26
SMSP52788 RNU1-36P-201ENST00000365130 165 ntBASIC0.93□□□□□ -2.26
SMSP52788 AF228730.4-201ENST00000421457 183 ntBASIC0.93□□□□□ -2.26
SMSP52788 AC236972.2-201ENST00000434979 310 ntBASIC0.93□□□□□ -2.26
SMSP52788 RNU7-90P-201ENST00000459216 62 ntBASIC0.93□□□□□ -2.26
SMSP52788 Y_RNA.713-201ENST00000517013 96 ntBASIC0.93□□□□□ -2.26
SMSP52788 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.93□□□□□ -2.26
SMSP52788 MIR5000-201ENST00000577717 103 ntBASIC0.93□□□□□ -2.26
SMSP52788 MIR5188-201ENST00000583467 113 ntBASIC0.93□□□□□ -2.26
SMSP52788 SNORD114-21-201ENST00000606412 72 ntBASIC0.93□□□□□ -2.26
SMSP52788 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
SMSP52788 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
SMSP52788 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
SMSP52788 Y_RNA.458-201ENST00000384240 102 ntBASIC0.92□□□□□ -2.26
SMSP52788 RNU6-1009P-201ENST00000390996 107 ntBASIC0.92□□□□□ -2.26
SMSP52788 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.92□□□□□ -2.26
SMSP52788 RNU6-855P-201ENST00000410395 104 ntBASIC0.92□□□□□ -2.26
SMSP52788 AC024067.1-201ENST00000426199 223 ntBASIC0.92□□□□□ -2.26
SMSP52788 RNU4-77P-201ENST00000516692 156 ntBASIC0.92□□□□□ -2.26
SMSP52788 AC090142.3-201ENST00000519012 385 ntBASIC0.92□□□□□ -2.26
SMSP52788 AC087685.1-201ENST00000587507 141 ntBASIC0.92□□□□□ -2.26
SMSP52788 AC092447.9-201ENST00000603395 144 ntBASIC0.92□□□□□ -2.26
SMSP52788 AL606534.2-204ENST00000635008 178 ntBASIC0.92□□□□□ -2.26
SMSP52788 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
SMSP52788 SNORD81.1-201ENST00000363064 77 ntBASIC0.91□□□□□ -2.26
SMSP52788 RNA5SP264-201ENST00000363115 107 ntBASIC0.91□□□□□ -2.26
SMSP52788 Y_RNA.341-201ENST00000365341 102 ntBASIC0.91□□□□□ -2.26
SMSP52788 Y_RNA.526-201ENST00000384572 110 ntBASIC0.91□□□□□ -2.26
SMSP52788 SNORA75.2-201ENST00000391138 150 ntBASIC0.91□□□□□ -2.26
SMSP52788 RNU6-131P-201ENST00000391144 107 ntBASIC0.91□□□□□ -2.26
SMSP52788 SNORA75.3-201ENST00000391231 150 ntBASIC0.91□□□□□ -2.26
SMSP52788 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.91□□□□□ -2.26
SMSP52788 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.91□□□□□ -2.26
SMSP52788 SNORD124-201ENST00000459577 104 ntBASIC0.91□□□□□ -2.26
SMSP52788 RNU7-43P-201ENST00000516554 64 ntBASIC0.91□□□□□ -2.26
SMSP52788 RPS29P30-201ENST00000600975 111 ntBASIC0.91□□□□□ -2.26
SMSP52788 AP003357.1-201ENST00000604497 148 ntBASIC0.91□□□□□ -2.26
SMSP52788 MIR6779-201ENST00000617283 64 ntBASIC0.91□□□□□ -2.26
SMSP52788 AC007742.2-201ENST00000618226 398 ntBASIC0.91□□□□□ -2.26
SMSP52788 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.91□□□□□ -2.26
SMSP52788 AC008163.1-202ENST00000636004 2889 ntBASIC0.91□□□□□ -2.26
SMSP52788 Y_RNA.5-201ENST00000362334 102 ntBASIC0.9□□□□□ -2.27
SMSP52788 RNU6-1084P-201ENST00000362498 107 ntBASIC0.9□□□□□ -2.27
SMSP52788 SNORD50B-201ENST00000364995 70 ntBASIC0.9□□□□□ -2.27
SMSP52788 Y_RNA.331-201ENST00000365267 102 ntBASIC0.9□□□□□ -2.27
SMSP52788 SNRPGP10-201ENST00000432323 225 ntBASIC0.9□□□□□ -2.27
SMSP52788 AL160004.2-201ENST00000432935 350 ntBASIC0.9□□□□□ -2.27
SMSP52788 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.9□□□□□ -2.27
SMSP52788 Y_RNA.529-201ENST00000384586 119 ntBASIC0.89□□□□□ -2.27
SMSP52788 Y_RNA.551-201ENST00000384661 102 ntBASIC0.89□□□□□ -2.27
SMSP52788 MIR520C-201ENST00000385005 87 ntBASIC0.89□□□□□ -2.27
SMSP52788 MIR532-201ENST00000385025 91 ntBASIC0.89□□□□□ -2.27
SMSP52788 MTND5P20-201ENST00000448677 143 ntBASIC0.89□□□□□ -2.27
SMSP52788 HMGN1P10-201ENST00000474557 553 ntBASIC0.89□□□□□ -2.27
SMSP52788 PDCD5P2-201ENST00000507570 312 ntBASIC0.89□□□□□ -2.27
SMSP52788 RNU6-475P-201ENST00000516073 104 ntBASIC0.89□□□□□ -2.27
SMSP52788 POLR3GP1-201ENST00000594073 261 ntBASIC0.89□□□□□ -2.27
SMSP52788 AC011373.1-201ENST00000607270 237 ntBASIC0.89□□□□□ -2.27
SMSP52788 AC104985.2-201ENST00000620598 500 ntBASIC0.89□□□□□ -2.27
SMSP52788 RNU4-38P-201ENST00000364472 129 ntBASIC0.88□□□□□ -2.27
SMSP52788 SNORD14.1-201ENST00000365609 90 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms