Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SNORA27.4-201ENST00000516650 95 ntBASIC1.77□□□□□ -2.13
NEK3P51956 AC019176.1-201ENST00000518519 225 ntBASIC1.77□□□□□ -2.13
NEK3P51956 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.77□□□□□ -2.13
NEK3P51956 AC090049.2-201ENST00000550377 109 ntBASIC1.77□□□□□ -2.13
NEK3P51956 MIR4778-201ENST00000577635 80 ntBASIC1.77□□□□□ -2.13
NEK3P51956 MIR3618-201ENST00000580330 88 ntBASIC1.77□□□□□ -2.13
NEK3P51956 MIR3683-201ENST00000580847 82 ntBASIC1.77□□□□□ -2.13
NEK3P51956 JPX_2.1-201ENST00000614161 69 ntBASIC1.77□□□□□ -2.13
NEK3P51956 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
NEK3P51956 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
NEK3P51956 UBE2WP1-201ENST00000362030 340 ntBASIC1.76□□□□□ -2.13
NEK3P51956 Y_RNA.26-201ENST00000362539 101 ntBASIC1.76□□□□□ -2.13
NEK3P51956 RNU1-17P-201ENST00000363022 152 ntBASIC1.76□□□□□ -2.13
NEK3P51956 MIR548F4-201ENST00000408515 105 ntBASIC1.76□□□□□ -2.13
NEK3P51956 SNORA36B-201ENST00000410438 131 ntBASIC1.76□□□□□ -2.13
NEK3P51956 RN7SKP51-201ENST00000410781 304 ntBASIC1.76□□□□□ -2.13
NEK3P51956 AC091959.1-201ENST00000495857 238 ntBASIC1.76□□□□□ -2.13
NEK3P51956 RNU6-1338P-201ENST00000516328 91 ntBASIC1.76□□□□□ -2.13
NEK3P51956 RNU6-635P-201ENST00000516651 102 ntBASIC1.76□□□□□ -2.13
NEK3P51956 MIR8081-201ENST00000611533 95 ntBASIC1.76□□□□□ -2.13
NEK3P51956 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.76□□□□□ -2.13
NEK3P51956 snoU2-30.1-201ENST00000365012 70 ntBASIC1.75□□□□□ -2.13
NEK3P51956 RNA5SP190-201ENST00000365222 118 ntBASIC1.75□□□□□ -2.13
NEK3P51956 MIR452-201ENST00000385020 85 ntBASIC1.75□□□□□ -2.13
NEK3P51956 SNORA26.5-201ENST00000391215 123 ntBASIC1.75□□□□□ -2.13
NEK3P51956 TRBVB-201ENST00000477100 408 ntBASIC1.75□□□□□ -2.13
NEK3P51956 AL117187.1-201ENST00000555482 181 ntBASIC1.75□□□□□ -2.13
NEK3P51956 MIR502-201ENST00000606349 86 ntBASIC1.75□□□□□ -2.13
NEK3P51956 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.75□□□□□ -2.13
NEK3P51956 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
NEK3P51956 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.75□□□□□ -2.13
NEK3P51956 MIR335-201ENST00000362173 94 ntBASIC1.74□□□□□ -2.13
NEK3P51956 RNU6-1272P-201ENST00000362776 107 ntBASIC1.74□□□□□ -2.13
NEK3P51956 Y_RNA.176-201ENST00000363815 109 ntBASIC1.74□□□□□ -2.13
NEK3P51956 AL078595.1-201ENST00000404458 226 ntBASIC1.74□□□□□ -2.13
NEK3P51956 AC092991.1-201ENST00000477176 376 ntBASIC1.74□□□□□ -2.13
NEK3P51956 AL512310.8-201ENST00000550183 120 ntBASIC1.74□□□□□ -2.13
NEK3P51956 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.74□□□□□ -2.13
NEK3P51956 AC008737.2-201ENST00000599446 118 ntBASIC1.74□□□□□ -2.13
NEK3P51956 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
NEK3P51956 AL357312.1-201ENST00000603879 298 ntBASIC1.74□□□□□ -2.13
NEK3P51956 AC013791.1-201ENST00000616619 62 ntBASIC1.74□□□□□ -2.13
NEK3P51956 Y_RNA.336-201ENST00000365307 109 ntBASIC1.73□□□□□ -2.13
NEK3P51956 Y_RNA.574-201ENST00000384766 95 ntBASIC1.73□□□□□ -2.13
NEK3P51956 RNU6-763P-201ENST00000390865 106 ntBASIC1.73□□□□□ -2.13
NEK3P51956 AL451046.2-201ENST00000403074 277 ntBASIC1.73□□□□□ -2.13
NEK3P51956 SNORD13-201ENST00000459299 104 ntBASIC1.73□□□□□ -2.13
NEK3P51956 AC114811.1-201ENST00000507207 168 ntBASIC1.73□□□□□ -2.13
NEK3P51956 RNU6-970P-201ENST00000516312 107 ntBASIC1.73□□□□□ -2.13
NEK3P51956 AL161670.1-201ENST00000554348 137 ntBASIC1.73□□□□□ -2.13
NEK3P51956 MIR3664-201ENST00000579074 99 ntBASIC1.73□□□□□ -2.13
NEK3P51956 MIR4255-201ENST00000579351 72 ntBASIC1.73□□□□□ -2.13
NEK3P51956 MIR5688-201ENST00000580619 83 ntBASIC1.73□□□□□ -2.13
NEK3P51956 AC005357.1-201ENST00000588399 301 ntBASIC1.73□□□□□ -2.13
NEK3P51956 AC136443.5-201ENST00000603741 370 ntBASIC1.73□□□□□ -2.13
NEK3P51956 MIR8062-201ENST00000621515 85 ntBASIC1.73□□□□□ -2.13
NEK3P51956 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
NEK3P51956 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.72□□□□□ -2.13
NEK3P51956 RNU6-1084P-201ENST00000362498 107 ntBASIC1.72□□□□□ -2.13
NEK3P51956 RNU6-1205P-201ENST00000363625 106 ntBASIC1.72□□□□□ -2.13
NEK3P51956 RNU6-457P-201ENST00000363999 107 ntBASIC1.72□□□□□ -2.13
NEK3P51956 Y_RNA.217-201ENST00000364214 105 ntBASIC1.72□□□□□ -2.13
NEK3P51956 Y_RNA.518-201ENST00000384552 113 ntBASIC1.72□□□□□ -2.13
NEK3P51956 MIR15B-201ENST00000385045 98 ntBASIC1.72□□□□□ -2.13
NEK3P51956 MIR1302-6-201ENST00000408466 90 ntBASIC1.72□□□□□ -2.13
NEK3P51956 RNU2-14P-201ENST00000411053 191 ntBASIC1.72□□□□□ -2.13
NEK3P51956 Y_RNA.641-201ENST00000459414 105 ntBASIC1.72□□□□□ -2.13
NEK3P51956 GHRLOS.1-201ENST00000610995 70 ntBASIC1.72□□□□□ -2.13
NEK3P51956 AC106754.2-201ENST00000623006 233 ntBASIC1.72□□□□□ -2.13
NEK3P51956 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
NEK3P51956 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
NEK3P51956 RNU6-1048P-201ENST00000364054 107 ntBASIC1.71□□□□□ -2.14
NEK3P51956 MTCO2P33-201ENST00000402100 465 ntBASIC1.71□□□□□ -2.14
NEK3P51956 MLLT10P1-201ENST00000418346 262 ntBASIC1.71□□□□□ -2.14
NEK3P51956 Y_RNA.637-201ENST00000459424 114 ntBASIC1.71□□□□□ -2.14
NEK3P51956 RNA5SP458-201ENST00000516188 119 ntBASIC1.71□□□□□ -2.14
NEK3P51956 SNORD45.4-201ENST00000516629 73 ntBASIC1.71□□□□□ -2.14
NEK3P51956 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
NEK3P51956 AL391987.6-201ENST00000305671 199 ntBASIC1.7□□□□□ -2.14
NEK3P51956 Y_RNA.16-201ENST00000362421 102 ntBASIC1.7□□□□□ -2.14
NEK3P51956 Y_RNA.149-201ENST00000363558 117 ntBASIC1.7□□□□□ -2.14
NEK3P51956 RNU6-1209P-201ENST00000363655 107 ntBASIC1.7□□□□□ -2.14
NEK3P51956 Y_RNA.796-201ENST00000364268 102 ntBASIC1.7□□□□□ -2.14
NEK3P51956 Y_RNA.799-201ENST00000364992 102 ntBASIC1.7□□□□□ -2.14
NEK3P51956 Y_RNA.376-201ENST00000365638 108 ntBASIC1.7□□□□□ -2.14
NEK3P51956 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
NEK3P51956 PIGPP3-201ENST00000425307 415 ntBASIC1.7□□□□□ -2.14
NEK3P51956 AC093850.1-201ENST00000454121 251 ntBASIC1.7□□□□□ -2.14
NEK3P51956 RNU6-917P-201ENST00000516294 104 ntBASIC1.7□□□□□ -2.14
NEK3P51956 RNU6-570P-201ENST00000517051 105 ntBASIC1.7□□□□□ -2.14
NEK3P51956 RNU6-1116P-201ENST00000517269 99 ntBASIC1.7□□□□□ -2.14
NEK3P51956 MIR5692C2-201ENST00000577959 77 ntBASIC1.7□□□□□ -2.14
NEK3P51956 AP001485.1-201ENST00000604799 199 ntBASIC1.7□□□□□ -2.14
NEK3P51956 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.7□□□□□ -2.14
NEK3P51956 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
NEK3P51956 Y_RNA.459-201ENST00000384251 102 ntBASIC1.69□□□□□ -2.14
NEK3P51956 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.69□□□□□ -2.14
NEK3P51956 AC023449.1-201ENST00000454464 154 ntBASIC1.69□□□□□ -2.14
NEK3P51956 Y_RNA.638-201ENST00000459374 113 ntBASIC1.69□□□□□ -2.14
NEK3P51956 MTATP8P1-201ENST00000467115 207 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms