Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 COX6CP6-201ENST00000490840 228 ntBASIC3.08□□□□□ -1.92
USP11P51784 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.08□□□□□ -1.92
USP11P51784 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.08□□□□□ -1.92
USP11P51784 AC242852.1-201ENST00000612151 96 ntBASIC3.08□□□□□ -1.92
USP11P51784 AC244015.1-201ENST00000622301 99 ntBASIC3.08□□□□□ -1.92
USP11P51784 AC080128.1-201ENST00000474389 1917 ntBASIC3.08□□□□□ -1.92
USP11P51784 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.08□□□□□ -1.92
USP11P51784 VTRNA1-1-201ENST00000363120 99 ntBASIC3.07□□□□□ -1.92
USP11P51784 RNU6-1131P-201ENST00000364955 107 ntBASIC3.07□□□□□ -1.92
USP11P51784 RNU6-294P-201ENST00000364999 102 ntBASIC3.07□□□□□ -1.92
USP11P51784 Y_RNA.388-201ENST00000383919 113 ntBASIC3.07□□□□□ -1.92
USP11P51784 AL117342.1-201ENST00000404861 406 ntBASIC3.07□□□□□ -1.92
USP11P51784 SNORA4.4-201ENST00000515921 135 ntBASIC3.07□□□□□ -1.92
USP11P51784 RNA5SP356-201ENST00000515972 94 ntBASIC3.07□□□□□ -1.92
USP11P51784 RNU6-991P-201ENST00000516168 107 ntBASIC3.07□□□□□ -1.92
USP11P51784 RNU7-99P-201ENST00000516271 62 ntBASIC3.07□□□□□ -1.92
USP11P51784 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.07□□□□□ -1.92
USP11P51784 RNU6-94P-201ENST00000607728 107 ntBASIC3.07□□□□□ -1.92
USP11P51784 MIR6733-201ENST00000635723 61 ntBASIC3.07□□□□□ -1.92
USP11P51784 U6.108-201ENST00000637764 58 ntBASIC3.07□□□□□ -1.92
USP11P51784 AC009487.2-201ENST00000420969 6821 ntBASIC3.07□□□□□ -1.92
USP11P51784 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
USP11P51784 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
USP11P51784 Y_RNA.323-201ENST00000365157 109 ntBASIC3.06□□□□□ -1.92
USP11P51784 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
USP11P51784 RNA5SP467-201ENST00000391274 118 ntBASIC3.06□□□□□ -1.92
USP11P51784 AC011406.1-201ENST00000512440 370 ntBASIC3.06□□□□□ -1.92
USP11P51784 AL591926.4-201ENST00000616895 298 ntBASIC3.06□□□□□ -1.92
USP11P51784 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.06□□□□□ -1.92
USP11P51784 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.05□□□□□ -1.92
USP11P51784 SNORA63.5-201ENST00000363548 123 ntBASIC3.05□□□□□ -1.92
USP11P51784 MIR95-201ENST00000385072 81 ntBASIC3.05□□□□□ -1.92
USP11P51784 MT-TI-201ENST00000387365 69 ntBASIC3.05□□□□□ -1.92
USP11P51784 SNRPGP13-201ENST00000442212 177 ntBASIC3.05□□□□□ -1.92
USP11P51784 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.05□□□□□ -1.92
USP11P51784 SNORD109B-201ENST00000458961 67 ntBASIC3.05□□□□□ -1.92
USP11P51784 SNORD109A-201ENST00000459128 67 ntBASIC3.05□□□□□ -1.92
USP11P51784 RNU6-240P-201ENST00000516098 97 ntBASIC3.05□□□□□ -1.92
USP11P51784 SCARNA3-201ENST00000517097 143 ntBASIC3.05□□□□□ -1.92
USP11P51784 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.05□□□□□ -1.92
USP11P51784 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.05□□□□□ -1.92
USP11P51784 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
USP11P51784 AC062016.1-201ENST00000355719 319 ntBASIC3.04□□□□□ -1.92
USP11P51784 SNORA68.1-201ENST00000364537 132 ntBASIC3.04□□□□□ -1.92
USP11P51784 MIR1302-5-201ENST00000408164 150 ntBASIC3.04□□□□□ -1.92
USP11P51784 RNA5SP184-201ENST00000411071 108 ntBASIC3.04□□□□□ -1.92
USP11P51784 RPL39P34-201ENST00000477141 156 ntBASIC3.04□□□□□ -1.92
USP11P51784 RPS26P48-201ENST00000491713 339 ntBASIC3.04□□□□□ -1.92
USP11P51784 RNU6-762P-201ENST00000517107 102 ntBASIC3.04□□□□□ -1.92
USP11P51784 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.04□□□□□ -1.92
USP11P51784 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
USP11P51784 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
USP11P51784 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
USP11P51784 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.03□□□□□ -1.92
USP11P51784 snoU2-30.2-201ENST00000362805 70 ntBASIC3.03□□□□□ -1.92
USP11P51784 MIR488-201ENST00000365739 83 ntBASIC3.03□□□□□ -1.92
USP11P51784 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
USP11P51784 RNU6-440P-201ENST00000390882 105 ntBASIC3.03□□□□□ -1.92
USP11P51784 FO393413.1-201ENST00000402892 195 ntBASIC3.03□□□□□ -1.92
USP11P51784 RNY4P29-201ENST00000410801 97 ntBASIC3.03□□□□□ -1.92
USP11P51784 RN7SL297P-201ENST00000483161 293 ntBASIC3.03□□□□□ -1.92
USP11P51784 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.03□□□□□ -1.92
USP11P51784 AC023141.11-201ENST00000508864 202 ntBASIC3.03□□□□□ -1.92
USP11P51784 MIR3162-201ENST00000581818 82 ntBASIC3.03□□□□□ -1.92
USP11P51784 MIR5197-201ENST00000583721 112 ntBASIC3.03□□□□□ -1.92
USP11P51784 MIR7157-201ENST00000635801 60 ntBASIC3.03□□□□□ -1.92
USP11P51784 MIR6079-201ENST00000635807 62 ntBASIC3.03□□□□□ -1.92
USP11P51784 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
USP11P51784 AC018630.2-201ENST00000534866 2403 ntBASIC3.02□□□□□ -1.93
USP11P51784 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
USP11P51784 MIR449A-201ENST00000362113 91 ntBASIC3.02□□□□□ -1.93
USP11P51784 MIR126-201ENST00000362291 85 ntBASIC3.02□□□□□ -1.93
USP11P51784 RNU6-859P-201ENST00000362728 107 ntBASIC3.02□□□□□ -1.93
USP11P51784 SNORA33-201ENST00000363664 130 ntBASIC3.02□□□□□ -1.93
USP11P51784 AL161788.1-201ENST00000441805 169 ntBASIC3.02□□□□□ -1.93
USP11P51784 RN7SL429P-201ENST00000479090 223 ntBASIC3.02□□□□□ -1.93
USP11P51784 RN7SL489P-201ENST00000486185 223 ntBASIC3.02□□□□□ -1.93
USP11P51784 RN7SL327P-201ENST00000488659 223 ntBASIC3.02□□□□□ -1.93
USP11P51784 CKS1BP2-201ENST00000497342 240 ntBASIC3.02□□□□□ -1.93
USP11P51784 RNA5SP282-201ENST00000516355 108 ntBASIC3.02□□□□□ -1.93
USP11P51784 RNA5SP281-201ENST00000516504 135 ntBASIC3.02□□□□□ -1.93
USP11P51784 RNU6-341P-201ENST00000516973 96 ntBASIC3.02□□□□□ -1.93
USP11P51784 MIR4319-201ENST00000577285 85 ntBASIC3.02□□□□□ -1.93
USP11P51784 AC007229.1-201ENST00000590455 412 ntBASIC3.02□□□□□ -1.93
USP11P51784 RN7SL853P-201ENST00000617250 223 ntBASIC3.02□□□□□ -1.93
USP11P51784 MIR338-201ENST00000636369 67 ntBASIC3.02□□□□□ -1.93
USP11P51784 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
USP11P51784 Y_RNA.198-201ENST00000364013 98 ntBASIC3.01□□□□□ -1.93
USP11P51784 Y_RNA.267-201ENST00000364679 109 ntBASIC3.01□□□□□ -1.93
USP11P51784 Y_RNA.362-201ENST00000365518 110 ntBASIC3.01□□□□□ -1.93
USP11P51784 RNU6-301P-201ENST00000384277 107 ntBASIC3.01□□□□□ -1.93
USP11P51784 MIR522-201ENST00000385071 87 ntBASIC3.01□□□□□ -1.93
USP11P51784 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.01□□□□□ -1.93
USP11P51784 RPS15AP28-201ENST00000435088 386 ntBASIC3.01□□□□□ -1.93
USP11P51784 AC108938.1-201ENST00000451204 136 ntBASIC3.01□□□□□ -1.93
USP11P51784 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.01□□□□□ -1.93
USP11P51784 RNU6-830P-201ENST00000516353 107 ntBASIC3.01□□□□□ -1.93
USP11P51784 MIR5739-201ENST00000619803 80 ntBASIC3.01□□□□□ -1.93
USP11P51784 ZNF271P-202ENST00000465539 1970 ntBASIC3.01□□□□□ -1.93
USP11P51784 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms