Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC097462.1-201ENST00000514125 324 ntBASIC1.65□□□□□ -2.15
CLK1P49759 RNU6-63P-201ENST00000516690 95 ntBASIC1.65□□□□□ -2.15
CLK1P49759 RNU7-128P-201ENST00000517247 62 ntBASIC1.65□□□□□ -2.15
CLK1P49759 MIR5692C2-201ENST00000577959 77 ntBASIC1.65□□□□□ -2.15
CLK1P49759 Z83818.1-201ENST00000603584 150 ntBASIC1.65□□□□□ -2.15
CLK1P49759 AL353149.1-201ENST00000610667 244 ntBASIC1.65□□□□□ -2.15
CLK1P49759 AC022513.1-201ENST00000624512 117 ntBASIC1.65□□□□□ -2.15
CLK1P49759 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CLK1P49759 snoU2-30.2-201ENST00000362805 70 ntBASIC1.64□□□□□ -2.15
CLK1P49759 RNU6-682P-201ENST00000363843 106 ntBASIC1.64□□□□□ -2.15
CLK1P49759 RNU6-923P-201ENST00000364753 107 ntBASIC1.64□□□□□ -2.15
CLK1P49759 U8.7-201ENST00000364940 136 ntBASIC1.64□□□□□ -2.15
CLK1P49759 MTCO2P33-201ENST00000402100 465 ntBASIC1.64□□□□□ -2.15
CLK1P49759 Y_RNA.793-201ENST00000411222 111 ntBASIC1.64□□□□□ -2.15
CLK1P49759 ATP5J2P3-201ENST00000451550 258 ntBASIC1.64□□□□□ -2.15
CLK1P49759 RNU7-120P-201ENST00000459334 63 ntBASIC1.64□□□□□ -2.15
CLK1P49759 RPS27P22-201ENST00000478056 241 ntBASIC1.64□□□□□ -2.15
CLK1P49759 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.64□□□□□ -2.15
CLK1P49759 RNU6-182P-201ENST00000516970 105 ntBASIC1.64□□□□□ -2.15
CLK1P49759 AC022559.1-201ENST00000520905 205 ntBASIC1.64□□□□□ -2.15
CLK1P49759 AC015720.1-201ENST00000565251 277 ntBASIC1.64□□□□□ -2.15
CLK1P49759 MIR4438-201ENST00000585271 93 ntBASIC1.64□□□□□ -2.15
CLK1P49759 U6.73-201ENST00000619194 103 ntBASIC1.64□□□□□ -2.15
CLK1P49759 MIR338-201ENST00000636369 67 ntBASIC1.64□□□□□ -2.15
CLK1P49759 U6.108-201ENST00000637764 58 ntBASIC1.64□□□□□ -2.15
CLK1P49759 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.64□□□□□ -2.15
CLK1P49759 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CLK1P49759 SNORA33-201ENST00000363664 130 ntBASIC1.63□□□□□ -2.15
CLK1P49759 RNU6-899P-201ENST00000363947 107 ntBASIC1.63□□□□□ -2.15
CLK1P49759 RNU1-96P-201ENST00000364163 162 ntBASIC1.63□□□□□ -2.15
CLK1P49759 Y_RNA.262-201ENST00000364641 102 ntBASIC1.63□□□□□ -2.15
CLK1P49759 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.63□□□□□ -2.15
CLK1P49759 Y_RNA.435-201ENST00000384095 112 ntBASIC1.63□□□□□ -2.15
CLK1P49759 RNU6-209P-201ENST00000384118 107 ntBASIC1.63□□□□□ -2.15
CLK1P49759 RNU6-296P-201ENST00000384608 107 ntBASIC1.63□□□□□ -2.15
CLK1P49759 Y_RNA.555-201ENST00000384673 110 ntBASIC1.63□□□□□ -2.15
CLK1P49759 U8.13-201ENST00000390842 128 ntBASIC1.63□□□□□ -2.15
CLK1P49759 RNU6-493P-201ENST00000391321 108 ntBASIC1.63□□□□□ -2.15
CLK1P49759 AC079140.2-201ENST00000506193 142 ntBASIC1.63□□□□□ -2.15
CLK1P49759 RNU6-1041P-201ENST00000516254 102 ntBASIC1.63□□□□□ -2.15
CLK1P49759 RNU7-115P-201ENST00000516433 55 ntBASIC1.63□□□□□ -2.15
CLK1P49759 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.63□□□□□ -2.15
CLK1P49759 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.63□□□□□ -2.15
CLK1P49759 AP003357.1-201ENST00000604497 148 ntBASIC1.63□□□□□ -2.15
CLK1P49759 AC068647.2-201ENST00000637380 353 ntBASIC1.63□□□□□ -2.15
CLK1P49759 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CLK1P49759 Y_RNA.150-201ENST00000363562 102 ntBASIC1.62□□□□□ -2.15
CLK1P49759 RNU6-1020P-201ENST00000363684 107 ntBASIC1.62□□□□□ -2.15
CLK1P49759 SNORD48-201ENST00000364953 64 ntBASIC1.62□□□□□ -2.15
CLK1P49759 Y_RNA.308-201ENST00000365043 101 ntBASIC1.62□□□□□ -2.15
CLK1P49759 RNU6-1323P-201ENST00000384025 107 ntBASIC1.62□□□□□ -2.15
CLK1P49759 RNU6-886P-201ENST00000384319 105 ntBASIC1.62□□□□□ -2.15
CLK1P49759 RNU6-417P-201ENST00000384712 107 ntBASIC1.62□□□□□ -2.15
CLK1P49759 RNA5SP511-201ENST00000410487 115 ntBASIC1.62□□□□□ -2.15
CLK1P49759 COX6CP10-201ENST00000416832 224 ntBASIC1.62□□□□□ -2.15
CLK1P49759 RPL30P13-201ENST00000418873 348 ntBASIC1.62□□□□□ -2.15
CLK1P49759 AL162725.1-201ENST00000435405 301 ntBASIC1.62□□□□□ -2.15
CLK1P49759 HSPE1P9-201ENST00000440046 311 ntBASIC1.62□□□□□ -2.15
CLK1P49759 AC099513.1-201ENST00000490423 301 ntBASIC1.62□□□□□ -2.15
CLK1P49759 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.62□□□□□ -2.15
CLK1P49759 AP002392.1-201ENST00000537692 208 ntBASIC1.62□□□□□ -2.15
CLK1P49759 MIR548AY-201ENST00000617669 107 ntBASIC1.62□□□□□ -2.15
CLK1P49759 AC100821.1-201ENST00000523153 2479 ntBASIC1.62□□□□□ -2.15
CLK1P49759 RNU4-10P-201ENST00000364383 140 ntBASIC1.61□□□□□ -2.15
CLK1P49759 RNU6-1019P-201ENST00000364424 107 ntBASIC1.61□□□□□ -2.15
CLK1P49759 SNORD26-201ENST00000384147 75 ntBASIC1.61□□□□□ -2.15
CLK1P49759 RNU6-381P-201ENST00000391259 108 ntBASIC1.61□□□□□ -2.15
CLK1P49759 AC099677.2-201ENST00000436385 175 ntBASIC1.61□□□□□ -2.15
CLK1P49759 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.61□□□□□ -2.15
CLK1P49759 AC117454.1-201ENST00000491120 168 ntBASIC1.61□□□□□ -2.15
CLK1P49759 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.61□□□□□ -2.15
CLK1P49759 RNU7-172P-201ENST00000517125 64 ntBASIC1.61□□□□□ -2.15
CLK1P49759 AL137100.2-201ENST00000555786 315 ntBASIC1.61□□□□□ -2.15
CLK1P49759 AC127455.1-201ENST00000565496 145 ntBASIC1.61□□□□□ -2.15
CLK1P49759 SNORA77B-201ENST00000578179 125 ntBASIC1.61□□□□□ -2.15
CLK1P49759 MIR4255-201ENST00000579351 72 ntBASIC1.61□□□□□ -2.15
CLK1P49759 Y_RNA.180-201ENST00000363867 113 ntBASIC1.6□□□□□ -2.15
CLK1P49759 snoU2_19.4-201ENST00000364329 80 ntBASIC1.6□□□□□ -2.15
CLK1P49759 Y_RNA.233-201ENST00000364407 101 ntBASIC1.6□□□□□ -2.15
CLK1P49759 Y_RNA.572-201ENST00000384757 98 ntBASIC1.6□□□□□ -2.15
CLK1P49759 MIR626-201ENST00000385032 94 ntBASIC1.6□□□□□ -2.15
CLK1P49759 MIR526A2-201ENST00000390198 65 ntBASIC1.6□□□□□ -2.15
CLK1P49759 SNORA40.18-201ENST00000391200 128 ntBASIC1.6□□□□□ -2.15
CLK1P49759 RNA5SP467-201ENST00000391274 118 ntBASIC1.6□□□□□ -2.15
CLK1P49759 SNORA26.9-201ENST00000391322 122 ntBASIC1.6□□□□□ -2.15
CLK1P49759 MIR1253-201ENST00000408273 105 ntBASIC1.6□□□□□ -2.15
CLK1P49759 RPS4XP11-201ENST00000446897 772 ntBASIC1.6□□□□□ -2.15
CLK1P49759 snoU13.26-201ENST00000459452 105 ntBASIC1.6□□□□□ -2.15
CLK1P49759 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.6□□□□□ -2.15
CLK1P49759 RNU6-861P-201ENST00000516745 106 ntBASIC1.6□□□□□ -2.15
CLK1P49759 AC005972.2-201ENST00000604690 348 ntBASIC1.6□□□□□ -2.15
CLK1P49759 AC072026.1-201ENST00000605023 201 ntBASIC1.6□□□□□ -2.15
CLK1P49759 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CLK1P49759 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
CLK1P49759 RNU6-1205P-201ENST00000363625 106 ntBASIC1.59□□□□□ -2.15
CLK1P49759 RNU4-17P-201ENST00000365598 141 ntBASIC1.59□□□□□ -2.15
CLK1P49759 RNU6-1065P-201ENST00000384513 106 ntBASIC1.59□□□□□ -2.15
CLK1P49759 Y_RNA.571-201ENST00000384753 98 ntBASIC1.59□□□□□ -2.15
CLK1P49759 MIR9-3-201ENST00000385084 90 ntBASIC1.59□□□□□ -2.15
CLK1P49759 SNORA36B-201ENST00000410438 131 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms