Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 snoU13.18-201ENST00000459483 104 ntBASIC1.28□□□□□ -2.2
RXRGP48443 SEPT14P8-201ENST00000508026 178 ntBASIC1.28□□□□□ -2.2
RXRGP48443 RNU6-1007P-201ENST00000516586 107 ntBASIC1.28□□□□□ -2.2
RXRGP48443 SNORD45.4-201ENST00000516629 73 ntBASIC1.28□□□□□ -2.2
RXRGP48443 AC136443.5-201ENST00000603741 370 ntBASIC1.28□□□□□ -2.2
RXRGP48443 AL080274.1-201ENST00000605565 220 ntBASIC1.28□□□□□ -2.2
RXRGP48443 Y_RNA.112-201ENST00000363250 102 ntBASIC1.27□□□□□ -2.21
RXRGP48443 Y_RNA.143-201ENST00000363520 106 ntBASIC1.27□□□□□ -2.21
RXRGP48443 Y_RNA.172-201ENST00000363765 102 ntBASIC1.27□□□□□ -2.21
RXRGP48443 RNU1-124P-201ENST00000363861 145 ntBASIC1.27□□□□□ -2.21
RXRGP48443 SNORD14E-201ENST00000364009 85 ntBASIC1.27□□□□□ -2.21
RXRGP48443 RNY1P14-201ENST00000384426 108 ntBASIC1.27□□□□□ -2.21
RXRGP48443 MIR526A1-201ENST00000384897 85 ntBASIC1.27□□□□□ -2.21
RXRGP48443 MIR522-201ENST00000385071 87 ntBASIC1.27□□□□□ -2.21
RXRGP48443 AC063976.4-201ENST00000421971 163 ntBASIC1.27□□□□□ -2.21
RXRGP48443 RPL23AP54-201ENST00000495129 419 ntBASIC1.27□□□□□ -2.21
RXRGP48443 SNORD116-28-201ENST00000516123 91 ntBASIC1.27□□□□□ -2.21
RXRGP48443 RNU6-966P-201ENST00000516479 104 ntBASIC1.27□□□□□ -2.21
RXRGP48443 DEFB117-201ENST00000602356 141 ntBASIC1.27□□□□□ -2.21
RXRGP48443 SNORD113-5-201ENST00000607261 78 ntBASIC1.27□□□□□ -2.21
RXRGP48443 SNORD58B-201ENST00000607313 66 ntBASIC1.27□□□□□ -2.21
RXRGP48443 AC012676.2-201ENST00000619258 186 ntBASIC1.27□□□□□ -2.21
RXRGP48443 AC090971.5-201ENST00000621102 293 ntBASIC1.27□□□□□ -2.21
RXRGP48443 AC091812.1-201ENST00000432235 1948 ntBASIC1.27□□□□□ -2.21
RXRGP48443 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.26□□□□□ -2.21
RXRGP48443 Y_RNA.242-201ENST00000364473 110 ntBASIC1.26□□□□□ -2.21
RXRGP48443 MIR1302-11-201ENST00000408051 138 ntBASIC1.26□□□□□ -2.21
RXRGP48443 MIR1302-9-201ENST00000408365 138 ntBASIC1.26□□□□□ -2.21
RXRGP48443 MIR1302-10-201ENST00000408734 138 ntBASIC1.26□□□□□ -2.21
RXRGP48443 AL591704.2-201ENST00000421658 181 ntBASIC1.26□□□□□ -2.21
RXRGP48443 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.26□□□□□ -2.21
RXRGP48443 RN7SKP179-201ENST00000516126 217 ntBASIC1.26□□□□□ -2.21
RXRGP48443 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
RXRGP48443 AC068338.1-201ENST00000565567 176 ntBASIC1.26□□□□□ -2.21
RXRGP48443 MIR2681-201ENST00000581814 105 ntBASIC1.26□□□□□ -2.21
RXRGP48443 AC087685.1-201ENST00000587507 141 ntBASIC1.26□□□□□ -2.21
RXRGP48443 MIR1302-2-201ENST00000607096 138 ntBASIC1.26□□□□□ -2.21
RXRGP48443 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.26□□□□□ -2.21
RXRGP48443 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
RXRGP48443 SNORA63.7-201ENST00000365579 123 ntBASIC1.25□□□□□ -2.21
RXRGP48443 RNU6-937P-201ENST00000384325 106 ntBASIC1.25□□□□□ -2.21
RXRGP48443 MIR489-201ENST00000384923 84 ntBASIC1.25□□□□□ -2.21
RXRGP48443 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.25□□□□□ -2.21
RXRGP48443 SNORA25.10-201ENST00000515926 124 ntBASIC1.25□□□□□ -2.21
RXRGP48443 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.25□□□□□ -2.21
RXRGP48443 LARP7P1-201ENST00000605576 316 ntBASIC1.25□□□□□ -2.21
RXRGP48443 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
RXRGP48443 Y_RNA.80-201ENST00000362996 102 ntBASIC1.24□□□□□ -2.21
RXRGP48443 Y_RNA.310-201ENST00000365063 113 ntBASIC1.24□□□□□ -2.21
RXRGP48443 SNORD114-22-201ENST00000365423 72 ntBASIC1.24□□□□□ -2.21
RXRGP48443 Y_RNA.485-201ENST00000384395 102 ntBASIC1.24□□□□□ -2.21
RXRGP48443 MIR516B2-201ENST00000385190 85 ntBASIC1.24□□□□□ -2.21
RXRGP48443 RNU4-30P-201ENST00000410245 143 ntBASIC1.24□□□□□ -2.21
RXRGP48443 AC136932.1-201ENST00000574771 208 ntBASIC1.24□□□□□ -2.21
RXRGP48443 AP003357.1-201ENST00000604497 148 ntBASIC1.24□□□□□ -2.21
RXRGP48443 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
RXRGP48443 Y_RNA.203-201ENST00000364106 102 ntBASIC1.23□□□□□ -2.21
RXRGP48443 SNORD38C-201ENST00000384381 69 ntBASIC1.23□□□□□ -2.21
RXRGP48443 MIR520C-201ENST00000385005 87 ntBASIC1.23□□□□□ -2.21
RXRGP48443 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.23□□□□□ -2.21
RXRGP48443 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.23□□□□□ -2.21
RXRGP48443 AC245047.8-201ENST00000456455 284 ntBASIC1.23□□□□□ -2.21
RXRGP48443 SNORD79.1-201ENST00000516069 84 ntBASIC1.23□□□□□ -2.21
RXRGP48443 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.23□□□□□ -2.21
RXRGP48443 AC024405.2-202ENST00000532731 184 ntBASIC1.23□□□□□ -2.21
RXRGP48443 MIR548AY-201ENST00000617669 107 ntBASIC1.23□□□□□ -2.21
RXRGP48443 MIR96-201ENST00000362288 78 ntBASIC1.22□□□□□ -2.21
RXRGP48443 AC117470.1-201ENST00000381974 330 ntBASIC1.22□□□□□ -2.21
RXRGP48443 Y_RNA.383-201ENST00000383855 97 ntBASIC1.22□□□□□ -2.21
RXRGP48443 Y_RNA.445-201ENST00000384168 102 ntBASIC1.22□□□□□ -2.21
RXRGP48443 AL590004.1-201ENST00000405321 300 ntBASIC1.22□□□□□ -2.21
RXRGP48443 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.22□□□□□ -2.21
RXRGP48443 HMGN1P10-201ENST00000474557 553 ntBASIC1.22□□□□□ -2.21
RXRGP48443 UBL5P1-201ENST00000507979 193 ntBASIC1.22□□□□□ -2.21
RXRGP48443 AC007485.1-201ENST00000616755 206 ntBASIC1.22□□□□□ -2.21
RXRGP48443 AC090574.1-201ENST00000623186 233 ntBASIC1.22□□□□□ -2.21
RXRGP48443 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
RXRGP48443 RNU1-93P-201ENST00000364704 169 ntBASIC1.21□□□□□ -2.22
RXRGP48443 MIR19B1-201ENST00000384829 87 ntBASIC1.21□□□□□ -2.22
RXRGP48443 MIR200A-201ENST00000384875 90 ntBASIC1.21□□□□□ -2.22
RXRGP48443 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.21□□□□□ -2.22
RXRGP48443 MTATP6P23-201ENST00000440153 476 ntBASIC1.21□□□□□ -2.22
RXRGP48443 RNU7-90P-201ENST00000459216 62 ntBASIC1.21□□□□□ -2.22
RXRGP48443 AC117454.1-201ENST00000491120 168 ntBASIC1.21□□□□□ -2.22
RXRGP48443 RNU7-115P-201ENST00000516433 55 ntBASIC1.21□□□□□ -2.22
RXRGP48443 RNU7-43P-201ENST00000516554 64 ntBASIC1.21□□□□□ -2.22
RXRGP48443 SNORA74.3-201ENST00000517108 154 ntBASIC1.21□□□□□ -2.22
RXRGP48443 Y_RNA.721-201ENST00000517207 102 ntBASIC1.21□□□□□ -2.22
RXRGP48443 AC090821.2-201ENST00000523552 176 ntBASIC1.21□□□□□ -2.22
RXRGP48443 AC127455.1-201ENST00000565496 145 ntBASIC1.21□□□□□ -2.22
RXRGP48443 MIR4661-201ENST00000582720 75 ntBASIC1.21□□□□□ -2.22
RXRGP48443 AC124312.5-201ENST00000604451 268 ntBASIC1.21□□□□□ -2.22
RXRGP48443 uc_338.22-201ENST00000622722 187 ntBASIC1.21□□□□□ -2.22
RXRGP48443 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RXRGP48443 SNORD114-24-201ENST00000365029 72 ntBASIC1.2□□□□□ -2.22
RXRGP48443 Y_RNA.395-201ENST00000383945 109 ntBASIC1.2□□□□□ -2.22
RXRGP48443 RNU6-442P-201ENST00000383968 104 ntBASIC1.2□□□□□ -2.22
RXRGP48443 RNU6-101P-201ENST00000410323 104 ntBASIC1.2□□□□□ -2.22
RXRGP48443 RPS23P4-201ENST00000487908 423 ntBASIC1.2□□□□□ -2.22
RXRGP48443 HSPE1P19-201ENST00000603327 295 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 210.4 ms