Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MIR1827-201ENST00000408549 66 ntBASIC0.45□□□□□ -2.34
SSR1P43307 MIR1278-201ENST00000408753 81 ntBASIC0.45□□□□□ -2.34
SSR1P43307 RNU6-855P-201ENST00000410395 104 ntBASIC0.45□□□□□ -2.34
SSR1P43307 Y_RNA.599-201ENST00000410489 109 ntBASIC0.45□□□□□ -2.34
SSR1P43307 AC244023.1-201ENST00000426884 112 ntBASIC0.45□□□□□ -2.34
SSR1P43307 FCF1P4-201ENST00000448326 183 ntBASIC0.45□□□□□ -2.34
SSR1P43307 AC116353.2-201ENST00000505332 712 ntBASIC0.45□□□□□ -2.34
SSR1P43307 SNORA68.3-201ENST00000515906 83 ntBASIC0.45□□□□□ -2.34
SSR1P43307 RNU6-470P-201ENST00000515954 104 ntBASIC0.45□□□□□ -2.34
SSR1P43307 RNU7-181P-201ENST00000517234 74 ntBASIC0.45□□□□□ -2.34
SSR1P43307 MIR4659A-201ENST00000580269 81 ntBASIC0.45□□□□□ -2.34
SSR1P43307 AC242498.1-201ENST00000604134 111 ntBASIC0.45□□□□□ -2.34
SSR1P43307 AC243994.1-201ENST00000618627 109 ntBASIC0.45□□□□□ -2.34
SSR1P43307 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
SSR1P43307 SNORA72-201ENST00000384339 132 ntBASIC0.44□□□□□ -2.34
SSR1P43307 MIR625-201ENST00000385047 85 ntBASIC0.44□□□□□ -2.34
SSR1P43307 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.44□□□□□ -2.34
SSR1P43307 AC005534.2-201ENST00000431047 433 ntBASIC0.44□□□□□ -2.34
SSR1P43307 HMGN1P10-201ENST00000474557 553 ntBASIC0.44□□□□□ -2.34
SSR1P43307 AC105313.1-201ENST00000509121 353 ntBASIC0.44□□□□□ -2.34
SSR1P43307 MIR548AO-201ENST00000579992 96 ntBASIC0.44□□□□□ -2.34
SSR1P43307 AC073869.6-201ENST00000640656 341 ntBASIC0.44□□□□□ -2.34
SSR1P43307 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.43□□□□□ -2.34
SSR1P43307 RNU6-205P-201ENST00000390858 107 ntBASIC0.43□□□□□ -2.34
SSR1P43307 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.43□□□□□ -2.34
SSR1P43307 AC092628.1-201ENST00000436250 252 ntBASIC0.43□□□□□ -2.34
SSR1P43307 MTCO3P10-201ENST00000455912 772 ntBASIC0.43□□□□□ -2.34
SSR1P43307 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.43□□□□□ -2.34
SSR1P43307 MIR3145-201ENST00000580727 82 ntBASIC0.43□□□□□ -2.34
SSR1P43307 MIR5087-201ENST00000635826 76 ntBASIC0.43□□□□□ -2.34
SSR1P43307 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.43□□□□□ -2.34
SSR1P43307 MIR1-1-201ENST00000362147 71 ntBASIC0.42□□□□□ -2.34
SSR1P43307 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
SSR1P43307 MIR499A-201ENST00000384903 122 ntBASIC0.42□□□□□ -2.34
SSR1P43307 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
SSR1P43307 Y_RNA.605-201ENST00000410577 105 ntBASIC0.42□□□□□ -2.34
SSR1P43307 RNA5SP247-201ENST00000411181 105 ntBASIC0.42□□□□□ -2.34
SSR1P43307 SNORD83.1-201ENST00000411362 77 ntBASIC0.42□□□□□ -2.34
SSR1P43307 PDCL2P1-201ENST00000419302 352 ntBASIC0.42□□□□□ -2.34
SSR1P43307 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.42□□□□□ -2.34
SSR1P43307 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.42□□□□□ -2.34
SSR1P43307 AL078603.1-201ENST00000603824 313 ntBASIC0.42□□□□□ -2.34
SSR1P43307 SNORD14E-201ENST00000364009 85 ntBASIC0.41□□□□□ -2.34
SSR1P43307 RNU6-1067P-201ENST00000384752 107 ntBASIC0.41□□□□□ -2.34
SSR1P43307 Y_RNA.577-201ENST00000384794 101 ntBASIC0.41□□□□□ -2.34
SSR1P43307 RNU6-192P-201ENST00000391253 100 ntBASIC0.41□□□□□ -2.34
SSR1P43307 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.41□□□□□ -2.34
SSR1P43307 RNU6-358P-201ENST00000516564 75 ntBASIC0.41□□□□□ -2.34
SSR1P43307 MIR2355-201ENST00000517199 87 ntBASIC0.41□□□□□ -2.34
SSR1P43307 POLR3GP1-201ENST00000594073 261 ntBASIC0.41□□□□□ -2.34
SSR1P43307 DEFB117-201ENST00000602356 141 ntBASIC0.41□□□□□ -2.34
SSR1P43307 Z83818.1-201ENST00000603584 150 ntBASIC0.41□□□□□ -2.34
SSR1P43307 AL355073.2-201ENST00000612106 557 ntBASIC0.41□□□□□ -2.34
SSR1P43307 AC098679.4-201ENST00000624241 654 ntBASIC0.41□□□□□ -2.34
SSR1P43307 U6.92-201ENST00000636464 89 ntBASIC0.41□□□□□ -2.34
SSR1P43307 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
SSR1P43307 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.4□□□□□ -2.34
SSR1P43307 AC027514.1-201ENST00000588561 1603 ntBASIC0.4□□□□□ -2.35
SSR1P43307 RNU6-1188P-201ENST00000363795 107 ntBASIC0.4□□□□□ -2.35
SSR1P43307 SNORD45.3-201ENST00000363836 72 ntBASIC0.4□□□□□ -2.35
SSR1P43307 Y_RNA.314-201ENST00000365114 102 ntBASIC0.4□□□□□ -2.35
SSR1P43307 RNU6-1175P-201ENST00000365200 107 ntBASIC0.4□□□□□ -2.35
SSR1P43307 MIR15B-201ENST00000385045 98 ntBASIC0.4□□□□□ -2.35
SSR1P43307 SNORD78.2-201ENST00000391076 69 ntBASIC0.4□□□□□ -2.35
SSR1P43307 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.4□□□□□ -2.35
SSR1P43307 MTND1P4-201ENST00000435196 415 ntBASIC0.4□□□□□ -2.35
SSR1P43307 HMGN2P32-201ENST00000444648 269 ntBASIC0.4□□□□□ -2.35
SSR1P43307 PRDX4P1-201ENST00000507189 574 ntBASIC0.4□□□□□ -2.35
SSR1P43307 RNU4-57P-201ENST00000515980 135 ntBASIC0.4□□□□□ -2.35
SSR1P43307 RNU6-307P-201ENST00000516743 106 ntBASIC0.4□□□□□ -2.35
SSR1P43307 RNU6-264P-201ENST00000517134 104 ntBASIC0.4□□□□□ -2.35
SSR1P43307 AC022616.4-201ENST00000522985 181 ntBASIC0.4□□□□□ -2.35
SSR1P43307 AC024405.2-202ENST00000532731 184 ntBASIC0.4□□□□□ -2.35
SSR1P43307 AC243829.3-201ENST00000622177 108 ntBASIC0.4□□□□□ -2.35
SSR1P43307 TPTEP1-208ENST00000636884 213 ntBASIC0.4□□□□□ -2.35
SSR1P43307 RNU6-1048P-201ENST00000364054 107 ntBASIC0.39□□□□□ -2.35
SSR1P43307 U8.7-201ENST00000364940 136 ntBASIC0.39□□□□□ -2.35
SSR1P43307 Y_RNA.341-201ENST00000365341 102 ntBASIC0.39□□□□□ -2.35
SSR1P43307 RNY3P4-201ENST00000384428 101 ntBASIC0.39□□□□□ -2.35
SSR1P43307 SNORD72-201ENST00000390994 80 ntBASIC0.39□□□□□ -2.35
SSR1P43307 SNORA75.6-201ENST00000391318 127 ntBASIC0.39□□□□□ -2.35
SSR1P43307 MCFD2P1-201ENST00000417812 300 ntBASIC0.39□□□□□ -2.35
SSR1P43307 AF228730.4-201ENST00000421457 183 ntBASIC0.39□□□□□ -2.35
SSR1P43307 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.39□□□□□ -2.35
SSR1P43307 SNRPGP14-201ENST00000435400 219 ntBASIC0.39□□□□□ -2.35
SSR1P43307 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.39□□□□□ -2.35
SSR1P43307 AL355375.2-201ENST00000574825 175 ntBASIC0.39□□□□□ -2.35
SSR1P43307 AC022441.3-201ENST00000605737 136 ntBASIC0.39□□□□□ -2.35
SSR1P43307 AL136317.1-201ENST00000612653 226 ntBASIC0.39□□□□□ -2.35
SSR1P43307 RMST_2.1-201ENST00000617263 136 ntBASIC0.39□□□□□ -2.35
SSR1P43307 MTND1P7-201ENST00000632801 297 ntBASIC0.39□□□□□ -2.35
SSR1P43307 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.38□□□□□ -2.35
SSR1P43307 RNU6-1209P-201ENST00000363655 107 ntBASIC0.38□□□□□ -2.35
SSR1P43307 Y_RNA.160-201ENST00000363677 92 ntBASIC0.38□□□□□ -2.35
SSR1P43307 Y_RNA.203-201ENST00000364106 102 ntBASIC0.38□□□□□ -2.35
SSR1P43307 Y_RNA.310-201ENST00000365063 113 ntBASIC0.38□□□□□ -2.35
SSR1P43307 MIR520H-201ENST00000385126 88 ntBASIC0.38□□□□□ -2.35
SSR1P43307 U8.17-201ENST00000391292 132 ntBASIC0.38□□□□□ -2.35
SSR1P43307 MTCO2P33-201ENST00000402100 465 ntBASIC0.38□□□□□ -2.35
SSR1P43307 RNU6-613P-201ENST00000410412 108 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms