Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RNU7-116P-201ENST00000516940 62 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 Y_RNA.777-201ENST00000516982 102 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 MIR3618-201ENST00000580330 88 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 POLR3GP1-201ENST00000594073 261 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 Y_RNA.771-201ENST00000598668 102 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 AC073349.3-201ENST00000617616 186 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 AC141273.2-201ENST00000618989 130 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 U1.36-201ENST00000620684 176 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 Y_RNA.789-201ENST00000622480 102 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 AC022513.1-201ENST00000624512 117 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 AC008555.8-201ENST00000623602 2168 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
COL15A1P39059 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.1□□□□□ -2.07
COL15A1P39059 AC080100.1-201ENST00000624239 5356 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 Y_RNA.76-201ENST00000362931 109 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 RNU6-1019P-201ENST00000364424 107 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 Y_RNA.293-201ENST00000364908 93 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 RNU6-392P-201ENST00000364926 101 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 RNU6-1318P-201ENST00000365389 103 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 AC104332.1-201ENST00000440471 797 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 AC233266.1-201ENST00000454518 96 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 RNU7-94P-201ENST00000459576 63 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 MIR514B-201ENST00000516774 80 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 AL008718.3-201ENST00000610217 321 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 AC242852.1-201ENST00000612151 96 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 AL442067.1-201ENST00000613261 223 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 AC013791.1-201ENST00000616619 62 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 MIR548AY-201ENST00000617669 107 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 AC244015.1-201ENST00000622301 99 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
COL15A1P39059 AC018630.2-201ENST00000534866 2403 ntBASIC2.09□□□□□ -2.08
COL15A1P39059 Y_RNA.257-201ENST00000364596 102 ntBASIC2.09□□□□□ -2.08
COL15A1P39059 Y_RNA.267-201ENST00000364679 109 ntBASIC2.09□□□□□ -2.08
COL15A1P39059 Y_RNA.292-201ENST00000364904 97 ntBASIC2.09□□□□□ -2.08
COL15A1P39059 U8.7-201ENST00000364940 136 ntBASIC2.09□□□□□ -2.08
COL15A1P39059 MIR520G-201ENST00000385064 90 ntBASIC2.09□□□□□ -2.08
COL15A1P39059 RNA5SP501-201ENST00000410990 112 ntBASIC2.09□□□□□ -2.08
COL15A1P39059 Y_RNA.621-201ENST00000411065 96 ntBASIC2.09□□□□□ -2.08
COL15A1P39059 RNA5SP450-201ENST00000411206 102 ntBASIC2.09□□□□□ -2.08
COL15A1P39059 AC004965.1-201ENST00000413033 213 ntBASIC2.09□□□□□ -2.08
COL15A1P39059 RPL23AP54-201ENST00000495129 419 ntBASIC2.09□□□□□ -2.08
COL15A1P39059 RNVU1-2-201ENST00000516326 135 ntBASIC2.09□□□□□ -2.08
COL15A1P39059 RNU6-1096P-201ENST00000517089 102 ntBASIC2.09□□□□□ -2.08
COL15A1P39059 RNU7-128P-201ENST00000517247 62 ntBASIC2.09□□□□□ -2.08
COL15A1P39059 AC024405.2-202ENST00000532731 184 ntBASIC2.09□□□□□ -2.08
COL15A1P39059 MIR5692C2-201ENST00000577959 77 ntBASIC2.09□□□□□ -2.08
COL15A1P39059 MIR4452-201ENST00000583004 71 ntBASIC2.09□□□□□ -2.08
COL15A1P39059 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.09□□□□□ -2.08
COL15A1P39059 PVT1_3.1-201ENST00000620853 95 ntBASIC2.09□□□□□ -2.08
COL15A1P39059 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.09□□□□□ -2.08
COL15A1P39059 U6.108-201ENST00000637764 58 ntBASIC2.09□□□□□ -2.08
COL15A1P39059 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
COL15A1P39059 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
COL15A1P39059 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL15A1P39059 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL15A1P39059 RNU6-1205P-201ENST00000363625 106 ntBASIC2.08□□□□□ -2.08
COL15A1P39059 RNU6-1323P-201ENST00000384025 107 ntBASIC2.08□□□□□ -2.08
COL15A1P39059 MIR676-201ENST00000390702 67 ntBASIC2.08□□□□□ -2.08
COL15A1P39059 SNORA48.1-201ENST00000390879 135 ntBASIC2.08□□□□□ -2.08
COL15A1P39059 RNU2-7P-201ENST00000410794 178 ntBASIC2.08□□□□□ -2.08
COL15A1P39059 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
COL15A1P39059 AC069257.2-201ENST00000441819 155 ntBASIC2.08□□□□□ -2.08
COL15A1P39059 SNORD2.1-201ENST00000458762 69 ntBASIC2.08□□□□□ -2.08
COL15A1P39059 AC091021.1-201ENST00000468051 388 ntBASIC2.08□□□□□ -2.08
COL15A1P39059 SNORD116-28-201ENST00000516123 91 ntBASIC2.08□□□□□ -2.08
COL15A1P39059 RNU7-115P-201ENST00000516433 55 ntBASIC2.08□□□□□ -2.08
COL15A1P39059 AC084364.2-201ENST00000546924 395 ntBASIC2.08□□□□□ -2.08
COL15A1P39059 AP003357.1-201ENST00000604497 148 ntBASIC2.08□□□□□ -2.08
COL15A1P39059 MIR6079-201ENST00000635807 62 ntBASIC2.08□□□□□ -2.08
COL15A1P39059 MIR562-201ENST00000384894 95 ntBASIC2.07□□□□□ -2.08
COL15A1P39059 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
COL15A1P39059 SNORD58.1-201ENST00000391313 66 ntBASIC2.07□□□□□ -2.08
COL15A1P39059 RPS4XP11-201ENST00000446897 772 ntBASIC2.07□□□□□ -2.08
COL15A1P39059 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.07□□□□□ -2.08
COL15A1P39059 RNA5SP220-201ENST00000516298 104 ntBASIC2.07□□□□□ -2.08
COL15A1P39059 MIR4282-201ENST00000583613 67 ntBASIC2.07□□□□□ -2.08
COL15A1P39059 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.07□□□□□ -2.08
COL15A1P39059 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
COL15A1P39059 SNORA72-201ENST00000384339 132 ntBASIC2.06□□□□□ -2.08
COL15A1P39059 MIR1323-201ENST00000408090 73 ntBASIC2.06□□□□□ -2.08
COL15A1P39059 SNORA36B-201ENST00000410438 131 ntBASIC2.06□□□□□ -2.08
COL15A1P39059 MTND2P29-201ENST00000438595 412 ntBASIC2.06□□□□□ -2.08
COL15A1P39059 RNA5SP233-201ENST00000459153 113 ntBASIC2.06□□□□□ -2.08
COL15A1P39059 RPS26P45-201ENST00000471748 340 ntBASIC2.06□□□□□ -2.08
COL15A1P39059 RN7SL274P-201ENST00000492268 272 ntBASIC2.06□□□□□ -2.08
COL15A1P39059 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.06□□□□□ -2.08
COL15A1P39059 RNU6-1291P-201ENST00000516591 104 ntBASIC2.06□□□□□ -2.08
COL15A1P39059 AC011604.1-201ENST00000545978 196 ntBASIC2.06□□□□□ -2.08
COL15A1P39059 SNORD53B-201ENST00000577887 78 ntBASIC2.06□□□□□ -2.08
COL15A1P39059 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.06□□□□□ -2.08
COL15A1P39059 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
COL15A1P39059 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
COL15A1P39059 Y_RNA.199-201ENST00000364014 102 ntBASIC2.05□□□□□ -2.08
COL15A1P39059 Y_RNA.200-201ENST00000364018 102 ntBASIC2.05□□□□□ -2.08
COL15A1P39059 RNU6-144P-201ENST00000383951 107 ntBASIC2.05□□□□□ -2.08
COL15A1P39059 RNU4-52P-201ENST00000384209 138 ntBASIC2.05□□□□□ -2.08
COL15A1P39059 MIR1298-201ENST00000408783 112 ntBASIC2.05□□□□□ -2.08
COL15A1P39059 RN7SKP101-201ENST00000411376 320 ntBASIC2.05□□□□□ -2.08
COL15A1P39059 AC108059.2-201ENST00000434626 151 ntBASIC2.05□□□□□ -2.08
COL15A1P39059 RNA5SP364-201ENST00000516938 78 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms