Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MIR1302-7-201ENST00000408841 72 ntBASIC0.63□□□□□ -2.31
RORAP35398 MTND1P2-201ENST00000430604 821 ntBASIC0.63□□□□□ -2.31
RORAP35398 SNORA18.7-201ENST00000516910 131 ntBASIC0.63□□□□□ -2.31
RORAP35398 RNU7-4P-201ENST00000516961 62 ntBASIC0.63□□□□□ -2.31
RORAP35398 RNU6-264P-201ENST00000517134 104 ntBASIC0.63□□□□□ -2.31
RORAP35398 AC004817.2-201ENST00000561794 651 ntBASIC0.63□□□□□ -2.31
RORAP35398 AC023827.1-201ENST00000569247 97 ntBASIC0.63□□□□□ -2.31
RORAP35398 MIR4764-201ENST00000580680 88 ntBASIC0.63□□□□□ -2.31
RORAP35398 AL512605.2-201ENST00000592972 256 ntBASIC0.63□□□□□ -2.31
RORAP35398 AC005972.2-201ENST00000604690 348 ntBASIC0.63□□□□□ -2.31
RORAP35398 RBM11P1-201ENST00000604951 799 ntBASIC0.63□□□□□ -2.31
RORAP35398 AC022441.3-201ENST00000605737 136 ntBASIC0.63□□□□□ -2.31
RORAP35398 AC104465.1-201ENST00000611365 139 ntBASIC0.63□□□□□ -2.31
RORAP35398 MIR6513-201ENST00000621188 64 ntBASIC0.63□□□□□ -2.31
RORAP35398 U6.92-201ENST00000636464 89 ntBASIC0.63□□□□□ -2.31
RORAP35398 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
RORAP35398 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
RORAP35398 RNU6-324P-201ENST00000363957 106 ntBASIC0.62□□□□□ -2.31
RORAP35398 Y_RNA.466-201ENST00000384294 113 ntBASIC0.62□□□□□ -2.31
RORAP35398 MIR520C-201ENST00000385005 87 ntBASIC0.62□□□□□ -2.31
RORAP35398 MIR136-201ENST00000385207 82 ntBASIC0.62□□□□□ -2.31
RORAP35398 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
RORAP35398 MLLT10P1-201ENST00000418346 262 ntBASIC0.62□□□□□ -2.31
RORAP35398 RPS26P5-201ENST00000418544 335 ntBASIC0.62□□□□□ -2.31
RORAP35398 AC096644.2-201ENST00000429278 159 ntBASIC0.62□□□□□ -2.31
RORAP35398 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.62□□□□□ -2.31
RORAP35398 AC144568.1-201ENST00000520139 137 ntBASIC0.62□□□□□ -2.31
RORAP35398 AC022616.4-201ENST00000522985 181 ntBASIC0.62□□□□□ -2.31
RORAP35398 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.62□□□□□ -2.31
RORAP35398 AC109810.1-201ENST00000534066 224 ntBASIC0.62□□□□□ -2.31
RORAP35398 MIR5690-201ENST00000583739 73 ntBASIC0.62□□□□□ -2.31
RORAP35398 AL353765.1-201ENST00000605514 183 ntBASIC0.62□□□□□ -2.31
RORAP35398 AC092794.1-201ENST00000612734 582 ntBASIC0.62□□□□□ -2.31
RORAP35398 U2.1-201ENST00000618978 145 ntBASIC0.62□□□□□ -2.31
RORAP35398 AC023934.1-201ENST00000574529 2389 ntBASIC0.62□□□□□ -2.31
RORAP35398 Y_RNA.329-201ENST00000365209 107 ntBASIC0.61□□□□□ -2.31
RORAP35398 SNORA72-201ENST00000384339 132 ntBASIC0.61□□□□□ -2.31
RORAP35398 MIR15B-201ENST00000385045 98 ntBASIC0.61□□□□□ -2.31
RORAP35398 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.61□□□□□ -2.31
RORAP35398 SNORD123-201ENST00000459473 70 ntBASIC0.61□□□□□ -2.31
RORAP35398 RNA5SP480-201ENST00000516840 109 ntBASIC0.61□□□□□ -2.31
RORAP35398 MIR4423-201ENST00000580922 80 ntBASIC0.61□□□□□ -2.31
RORAP35398 SNORD14.1-201ENST00000365609 90 ntBASIC0.6□□□□□ -2.31
RORAP35398 RNU6-110P-201ENST00000384508 104 ntBASIC0.6□□□□□ -2.31
RORAP35398 SNORD116-29-201ENST00000384516 83 ntBASIC0.6□□□□□ -2.31
RORAP35398 Y_RNA.570-201ENST00000384750 101 ntBASIC0.6□□□□□ -2.31
RORAP35398 MCFD2P1-201ENST00000417812 300 ntBASIC0.6□□□□□ -2.31
RORAP35398 MTCO2P27-201ENST00000420740 428 ntBASIC0.6□□□□□ -2.31
RORAP35398 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.6□□□□□ -2.31
RORAP35398 AL392103.1-201ENST00000447000 198 ntBASIC0.6□□□□□ -2.31
RORAP35398 RNU6-559P-201ENST00000516151 98 ntBASIC0.6□□□□□ -2.31
RORAP35398 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.6□□□□□ -2.31
RORAP35398 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.6□□□□□ -2.31
RORAP35398 SNORD81.1-201ENST00000363064 77 ntBASIC0.59□□□□□ -2.31
RORAP35398 RNA5SP48-201ENST00000363969 126 ntBASIC0.59□□□□□ -2.31
RORAP35398 Y_RNA.230-201ENST00000364348 109 ntBASIC0.59□□□□□ -2.31
RORAP35398 snoU2-30.1-201ENST00000365012 70 ntBASIC0.59□□□□□ -2.31
RORAP35398 Y_RNA.314-201ENST00000365114 102 ntBASIC0.59□□□□□ -2.31
RORAP35398 Y_RNA.605-201ENST00000410577 105 ntBASIC0.59□□□□□ -2.31
RORAP35398 Y_RNA.619-201ENST00000410951 90 ntBASIC0.59□□□□□ -2.31
RORAP35398 PRDX4P1-201ENST00000507189 574 ntBASIC0.59□□□□□ -2.31
RORAP35398 RNU6-277P-201ENST00000516272 106 ntBASIC0.59□□□□□ -2.31
RORAP35398 RNU6-911P-201ENST00000516523 104 ntBASIC0.59□□□□□ -2.31
RORAP35398 RNU7-43P-201ENST00000516554 64 ntBASIC0.59□□□□□ -2.31
RORAP35398 RNU6-699P-201ENST00000517081 110 ntBASIC0.59□□□□□ -2.31
RORAP35398 AC036111.3-201ENST00000526389 112 ntBASIC0.59□□□□□ -2.31
RORAP35398 AC113139.1-201ENST00000605049 239 ntBASIC0.59□□□□□ -2.31
RORAP35398 RNU6-94P-201ENST00000607728 107 ntBASIC0.59□□□□□ -2.31
RORAP35398 MTND4LP32-201ENST00000636111 270 ntBASIC0.59□□□□□ -2.31
RORAP35398 AC134026.1-201ENST00000623249 2239 ntBASIC0.58□□□□□ -2.32
RORAP35398 RNU6-1084P-201ENST00000362498 107 ntBASIC0.58□□□□□ -2.32
RORAP35398 Y_RNA.27-201ENST00000362540 103 ntBASIC0.58□□□□□ -2.32
RORAP35398 SNORD114-26-201ENST00000363543 72 ntBASIC0.58□□□□□ -2.32
RORAP35398 RNU6-654P-201ENST00000364373 107 ntBASIC0.58□□□□□ -2.32
RORAP35398 Y_RNA.310-201ENST00000365063 113 ntBASIC0.58□□□□□ -2.32
RORAP35398 RNU6-1175P-201ENST00000365200 107 ntBASIC0.58□□□□□ -2.32
RORAP35398 Y_RNA.368-201ENST00000365547 113 ntBASIC0.58□□□□□ -2.32
RORAP35398 Y_RNA.393-201ENST00000383936 102 ntBASIC0.58□□□□□ -2.32
RORAP35398 SNORD28B-201ENST00000390993 75 ntBASIC0.58□□□□□ -2.32
RORAP35398 RNU6-131P-201ENST00000391144 107 ntBASIC0.58□□□□□ -2.32
RORAP35398 AL590004.1-201ENST00000405321 300 ntBASIC0.58□□□□□ -2.32
RORAP35398 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.58□□□□□ -2.32
RORAP35398 AF228730.4-201ENST00000421457 183 ntBASIC0.58□□□□□ -2.32
RORAP35398 HMGN2P32-201ENST00000444648 269 ntBASIC0.58□□□□□ -2.32
RORAP35398 Y_RNA.653-201ENST00000459091 95 ntBASIC0.58□□□□□ -2.32
RORAP35398 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.58□□□□□ -2.32
RORAP35398 AC091951.2-201ENST00000500762 203 ntBASIC0.58□□□□□ -2.32
RORAP35398 AC113410.1-201ENST00000505029 247 ntBASIC0.58□□□□□ -2.32
RORAP35398 RNA5SP121-201ENST00000516537 101 ntBASIC0.58□□□□□ -2.32
RORAP35398 U6atac.1-201ENST00000616025 117 ntBASIC0.58□□□□□ -2.32
RORAP35398 RNU6-1323P-201ENST00000384025 107 ntBASIC0.57□□□□□ -2.32
RORAP35398 Y_RNA.505-201ENST00000384489 102 ntBASIC0.57□□□□□ -2.32
RORAP35398 MIR936-201ENST00000401264 98 ntBASIC0.57□□□□□ -2.32
RORAP35398 RNU6-855P-201ENST00000410395 104 ntBASIC0.57□□□□□ -2.32
RORAP35398 SNRPGP14-201ENST00000435400 219 ntBASIC0.57□□□□□ -2.32
RORAP35398 U8.19-201ENST00000459095 133 ntBASIC0.57□□□□□ -2.32
RORAP35398 AC098869.1-201ENST00000481627 292 ntBASIC0.57□□□□□ -2.32
RORAP35398 COX6CP6-201ENST00000490840 228 ntBASIC0.57□□□□□ -2.32
RORAP35398 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.57□□□□□ -2.32
RORAP35398 SNORA20.3-201ENST00000516880 132 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms