Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.05□□□□□ -2.42
RPA3P35244 SNORD5.1-201ENST00000458800 75 ntBASIC-0.05□□□□□ -2.42
RPA3P35244 AC116353.2-201ENST00000505332 712 ntBASIC-0.05□□□□□ -2.42
RPA3P35244 RNU6-863P-201ENST00000515989 104 ntBASIC-0.05□□□□□ -2.42
RPA3P35244 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.05□□□□□ -2.42
RPA3P35244 AC018638.8-201ENST00000588755 281 ntBASIC-0.05□□□□□ -2.42
RPA3P35244 RNU6-716P-201ENST00000365621 103 ntBASIC-0.06□□□□□ -2.42
RPA3P35244 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.06□□□□□ -2.42
RPA3P35244 RNA5SP63-201ENST00000391225 112 ntBASIC-0.06□□□□□ -2.42
RPA3P35244 U8.17-201ENST00000391292 132 ntBASIC-0.06□□□□□ -2.42
RPA3P35244 MIR1197-201ENST00000408818 88 ntBASIC-0.06□□□□□ -2.42
RPA3P35244 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.06□□□□□ -2.42
RPA3P35244 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.06□□□□□ -2.42
RPA3P35244 RNU6-864P-201ENST00000516256 108 ntBASIC-0.06□□□□□ -2.42
RPA3P35244 RNU7-181P-201ENST00000517234 74 ntBASIC-0.06□□□□□ -2.42
RPA3P35244 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.06□□□□□ -2.42
RPA3P35244 MIR4768-201ENST00000585270 74 ntBASIC-0.06□□□□□ -2.42
RPA3P35244 RN7SKP299-201ENST00000606679 301 ntBASIC-0.06□□□□□ -2.42
RPA3P35244 MIR4791-201ENST00000607666 84 ntBASIC-0.06□□□□□ -2.42
RPA3P35244 Pinc.1-201ENST00000616452 154 ntBASIC-0.06□□□□□ -2.42
RPA3P35244 AC090617.10-201ENST00000624308 134 ntBASIC-0.06□□□□□ -2.42
RPA3P35244 RNU6-961P-201ENST00000363893 105 ntBASIC-0.07□□□□□ -2.42
RPA3P35244 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.07□□□□□ -2.42
RPA3P35244 SNORD114-9-201ENST00000364370 72 ntBASIC-0.07□□□□□ -2.42
RPA3P35244 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.07□□□□□ -2.42
RPA3P35244 SNORA72-201ENST00000384339 132 ntBASIC-0.07□□□□□ -2.42
RPA3P35244 SNORA8.2-201ENST00000384372 139 ntBASIC-0.07□□□□□ -2.42
RPA3P35244 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.07□□□□□ -2.42
RPA3P35244 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
RPA3P35244 SNORD100-201ENST00000408573 76 ntBASIC-0.07□□□□□ -2.42
RPA3P35244 RNU2-61P-201ENST00000411069 191 ntBASIC-0.07□□□□□ -2.42
RPA3P35244 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.07□□□□□ -2.42
RPA3P35244 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.07□□□□□ -2.42
RPA3P35244 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.07□□□□□ -2.42
RPA3P35244 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.07□□□□□ -2.42
RPA3P35244 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.07□□□□□ -2.42
RPA3P35244 RNA5SP330-201ENST00000517096 96 ntBASIC-0.07□□□□□ -2.42
RPA3P35244 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.07□□□□□ -2.42
RPA3P35244 MIR4264-201ENST00000583520 66 ntBASIC-0.07□□□□□ -2.42
RPA3P35244 AC006380.1-201ENST00000603598 186 ntBASIC-0.07□□□□□ -2.42
RPA3P35244 uc_338.16-201ENST00000621804 95 ntBASIC-0.07□□□□□ -2.42
RPA3P35244 SNORD114-16-201ENST00000363044 70 ntBASIC-0.08□□□□□ -2.42
RPA3P35244 RNA5SP214-201ENST00000363378 118 ntBASIC-0.08□□□□□ -2.42
RPA3P35244 RNU6-767P-201ENST00000384132 107 ntBASIC-0.08□□□□□ -2.42
RPA3P35244 MTND1P17-201ENST00000448961 204 ntBASIC-0.08□□□□□ -2.42
RPA3P35244 U8.19-201ENST00000459095 133 ntBASIC-0.08□□□□□ -2.42
RPA3P35244 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.08□□□□□ -2.42
RPA3P35244 RNU6-830P-201ENST00000516353 107 ntBASIC-0.08□□□□□ -2.42
RPA3P35244 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.08□□□□□ -2.42
RPA3P35244 AC008608.1-201ENST00000603910 127 ntBASIC-0.08□□□□□ -2.42
RPA3P35244 Z99129.1-201ENST00000612510 255 ntBASIC-0.08□□□□□ -2.42
RPA3P35244 AC240442.1-201ENST00000616055 283 ntBASIC-0.08□□□□□ -2.42
RPA3P35244 MIR3662-201ENST00000637030 95 ntBASIC-0.08□□□□□ -2.42
RPA3P35244 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.09□□□□□ -2.42
RPA3P35244 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.09□□□□□ -2.42
RPA3P35244 SNORA42.1-201ENST00000363515 137 ntBASIC-0.09□□□□□ -2.42
RPA3P35244 SNORD116-8-201ENST00000384365 95 ntBASIC-0.09□□□□□ -2.42
RPA3P35244 MIR938-201ENST00000401216 83 ntBASIC-0.09□□□□□ -2.42
RPA3P35244 BTF3P11-201ENST00000426582 477 ntBASIC-0.09□□□□□ -2.42
RPA3P35244 RNU6-566P-201ENST00000516790 107 ntBASIC-0.09□□□□□ -2.42
RPA3P35244 AC112693.2-201ENST00000556538 232 ntBASIC-0.09□□□□□ -2.42
RPA3P35244 uc_338.4-201ENST00000616635 176 ntBASIC-0.09□□□□□ -2.42
RPA3P35244 AC078883.4-201ENST00000623218 367 ntBASIC-0.09□□□□□ -2.42
RPA3P35244 AC024614.3-201ENST00000637860 256 ntBASIC-0.09□□□□□ -2.42
RPA3P35244 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.09□□□□□ -2.42
RPA3P35244 SNORA75.6-201ENST00000391318 127 ntBASIC-0.1□□□□□ -2.43
RPA3P35244 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.43
RPA3P35244 SNRPGP14-201ENST00000435400 219 ntBASIC-0.1□□□□□ -2.43
RPA3P35244 CHEK2P4-201ENST00000450340 246 ntBASIC-0.1□□□□□ -2.43
RPA3P35244 AC011352.1-201ENST00000512300 793 ntBASIC-0.1□□□□□ -2.43
RPA3P35244 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.1□□□□□ -2.43
RPA3P35244 AC090897.1-201ENST00000580909 226 ntBASIC-0.1□□□□□ -2.43
RPA3P35244 MIR5190-201ENST00000581537 80 ntBASIC-0.1□□□□□ -2.43
RPA3P35244 uc_338.6-201ENST00000613544 171 ntBASIC-0.1□□□□□ -2.43
RPA3P35244 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.11□□□□□ -2.43
RPA3P35244 RNU6-324P-201ENST00000363957 106 ntBASIC-0.11□□□□□ -2.43
RPA3P35244 RNU6-442P-201ENST00000383968 104 ntBASIC-0.11□□□□□ -2.43
RPA3P35244 RNU6-831P-201ENST00000384548 107 ntBASIC-0.11□□□□□ -2.43
RPA3P35244 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.11□□□□□ -2.43
RPA3P35244 SEPT7P4-201ENST00000437076 306 ntBASIC-0.11□□□□□ -2.43
RPA3P35244 RNU7-62P-201ENST00000458856 62 ntBASIC-0.11□□□□□ -2.43
RPA3P35244 MIR3678-201ENST00000578455 94 ntBASIC-0.11□□□□□ -2.43
RPA3P35244 AC104408.1-201ENST00000605241 170 ntBASIC-0.11□□□□□ -2.43
RPA3P35244 MIR411-201ENST00000362239 96 ntBASIC-0.12□□□□□ -2.43
RPA3P35244 RNU6-268P-201ENST00000364174 107 ntBASIC-0.12□□□□□ -2.43
RPA3P35244 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.12□□□□□ -2.43
RPA3P35244 MIR802-201ENST00000390235 94 ntBASIC-0.12□□□□□ -2.43
RPA3P35244 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
RPA3P35244 RNU6-1148P-201ENST00000410992 104 ntBASIC-0.12□□□□□ -2.43
RPA3P35244 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-0.12□□□□□ -2.43
RPA3P35244 AC090844.1-201ENST00000422019 156 ntBASIC-0.12□□□□□ -2.43
RPA3P35244 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.12□□□□□ -2.43
RPA3P35244 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.12□□□□□ -2.43
RPA3P35244 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.12□□□□□ -2.43
RPA3P35244 AC018462.2-201ENST00000605375 395 ntBASIC-0.12□□□□□ -2.43
RPA3P35244 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.12□□□□□ -2.43
RPA3P35244 MIR1321-201ENST00000637766 79 ntBASIC-0.12□□□□□ -2.43
RPA3P35244 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.13□□□□□ -2.43
RPA3P35244 RNU6-926P-201ENST00000384075 107 ntBASIC-0.13□□□□□ -2.43
RPA3P35244 RNU6-192P-201ENST00000391253 100 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms