Protein–RNA interactions for Protein: P31274

HOXC9, Homeobox protein Hox-C9, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9P31274 COX6CP14-201ENST00000469580 174 ntBASIC1.66□□□□□ -2.14
HOXC9P31274 RNU6-341P-201ENST00000516973 96 ntBASIC1.66□□□□□ -2.14
HOXC9P31274 PRR13P7-201ENST00000605538 430 ntBASIC1.66□□□□□ -2.14
HOXC9P31274 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.66□□□□□ -2.14
HOXC9P31274 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HOXC9P31274 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
HOXC9P31274 Y_RNA.176-201ENST00000363815 109 ntBASIC1.65□□□□□ -2.15
HOXC9P31274 Y_RNA.310-201ENST00000365063 113 ntBASIC1.65□□□□□ -2.15
HOXC9P31274 Y_RNA.376-201ENST00000365638 108 ntBASIC1.65□□□□□ -2.15
HOXC9P31274 RNU6-1080P-201ENST00000383982 107 ntBASIC1.65□□□□□ -2.15
HOXC9P31274 Y_RNA.461-201ENST00000384263 103 ntBASIC1.65□□□□□ -2.15
HOXC9P31274 MIR1267-201ENST00000408723 78 ntBASIC1.65□□□□□ -2.15
HOXC9P31274 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.65□□□□□ -2.15
HOXC9P31274 AC245517.4-201ENST00000448601 281 ntBASIC1.65□□□□□ -2.15
HOXC9P31274 TRBVB-201ENST00000477100 408 ntBASIC1.65□□□□□ -2.15
HOXC9P31274 AC008834.1-201ENST00000511612 175 ntBASIC1.65□□□□□ -2.15
HOXC9P31274 RNU6-191P-201ENST00000516295 94 ntBASIC1.65□□□□□ -2.15
HOXC9P31274 RNU2-31P-201ENST00000516954 155 ntBASIC1.65□□□□□ -2.15
HOXC9P31274 DEFB108E-201ENST00000524692 240 ntBASIC1.65□□□□□ -2.15
HOXC9P31274 AC005972.2-201ENST00000604690 348 ntBASIC1.65□□□□□ -2.15
HOXC9P31274 AC095038.3-201ENST00000634439 195 ntBASIC1.65□□□□□ -2.15
HOXC9P31274 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
HOXC9P31274 Y_RNA.47-201ENST00000362697 108 ntBASIC1.64□□□□□ -2.15
HOXC9P31274 Y_RNA.149-201ENST00000363558 117 ntBASIC1.64□□□□□ -2.15
HOXC9P31274 RNU6-1048P-201ENST00000364054 107 ntBASIC1.64□□□□□ -2.15
HOXC9P31274 Y_RNA.368-201ENST00000365547 113 ntBASIC1.64□□□□□ -2.15
HOXC9P31274 Y_RNA.456-201ENST00000384232 111 ntBASIC1.64□□□□□ -2.15
HOXC9P31274 RNU6-1105P-201ENST00000384774 107 ntBASIC1.64□□□□□ -2.15
HOXC9P31274 MIR562-201ENST00000384894 95 ntBASIC1.64□□□□□ -2.15
HOXC9P31274 RNU6-1203P-201ENST00000410703 110 ntBASIC1.64□□□□□ -2.15
HOXC9P31274 AL358176.2-201ENST00000425769 204 ntBASIC1.64□□□□□ -2.15
HOXC9P31274 AC005908.1-201ENST00000468701 347 ntBASIC1.64□□□□□ -2.15
HOXC9P31274 AC117454.1-201ENST00000491120 168 ntBASIC1.64□□□□□ -2.15
HOXC9P31274 RNU6-1338P-201ENST00000516328 91 ntBASIC1.64□□□□□ -2.15
HOXC9P31274 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.64□□□□□ -2.15
HOXC9P31274 AP002004.2-201ENST00000531656 154 ntBASIC1.64□□□□□ -2.15
HOXC9P31274 AC011604.1-201ENST00000545978 196 ntBASIC1.64□□□□□ -2.15
HOXC9P31274 AL512605.2-201ENST00000592972 256 ntBASIC1.64□□□□□ -2.15
HOXC9P31274 MIR8074-201ENST00000615081 81 ntBASIC1.64□□□□□ -2.15
HOXC9P31274 MIR6767-201ENST00000637302 66 ntBASIC1.64□□□□□ -2.15
HOXC9P31274 AC134026.1-201ENST00000623249 2239 ntBASIC1.63□□□□□ -2.15
HOXC9P31274 Y_RNA.136-201ENST00000363444 102 ntBASIC1.63□□□□□ -2.15
HOXC9P31274 RNU6-1031P-201ENST00000384773 107 ntBASIC1.63□□□□□ -2.15
HOXC9P31274 RNU6-1248P-201ENST00000391096 64 ntBASIC1.63□□□□□ -2.15
HOXC9P31274 AL034345.1-201ENST00000407768 123 ntBASIC1.63□□□□□ -2.15
HOXC9P31274 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.63□□□□□ -2.15
HOXC9P31274 FTH1P12-201ENST00000432137 551 ntBASIC1.63□□□□□ -2.15
HOXC9P31274 JTBP1-201ENST00000441314 247 ntBASIC1.63□□□□□ -2.15
HOXC9P31274 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.63□□□□□ -2.15
HOXC9P31274 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.63□□□□□ -2.15
HOXC9P31274 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.63□□□□□ -2.15
HOXC9P31274 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.63□□□□□ -2.15
HOXC9P31274 AC021506.2-201ENST00000612354 169 ntBASIC1.63□□□□□ -2.15
HOXC9P31274 MIR8062-201ENST00000621515 85 ntBASIC1.63□□□□□ -2.15
HOXC9P31274 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.63□□□□□ -2.15
HOXC9P31274 MIR424-201ENST00000362227 98 ntBASIC1.62□□□□□ -2.15
HOXC9P31274 SNORD114-27-201ENST00000363766 70 ntBASIC1.62□□□□□ -2.15
HOXC9P31274 Y_RNA.483-201ENST00000384380 101 ntBASIC1.62□□□□□ -2.15
HOXC9P31274 MIR30A-201ENST00000385092 71 ntBASIC1.62□□□□□ -2.15
HOXC9P31274 MIR1302-6-201ENST00000408466 90 ntBASIC1.62□□□□□ -2.15
HOXC9P31274 RNU2-14P-201ENST00000411053 191 ntBASIC1.62□□□□□ -2.15
HOXC9P31274 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.62□□□□□ -2.15
HOXC9P31274 snoU13.18-201ENST00000459483 104 ntBASIC1.62□□□□□ -2.15
HOXC9P31274 AL049830.1-201ENST00000468034 425 ntBASIC1.62□□□□□ -2.15
HOXC9P31274 AC099513.1-201ENST00000490423 301 ntBASIC1.62□□□□□ -2.15
HOXC9P31274 AC091959.1-201ENST00000495857 238 ntBASIC1.62□□□□□ -2.15
HOXC9P31274 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.62□□□□□ -2.15
HOXC9P31274 MIR3198-2-201ENST00000577868 80 ntBASIC1.62□□□□□ -2.15
HOXC9P31274 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
HOXC9P31274 RNU6-326P-201ENST00000365480 107 ntBASIC1.61□□□□□ -2.15
HOXC9P31274 Y_RNA.396-201ENST00000383949 103 ntBASIC1.61□□□□□ -2.15
HOXC9P31274 RNU6-662P-201ENST00000384253 104 ntBASIC1.61□□□□□ -2.15
HOXC9P31274 MT-TW-201ENST00000387382 68 ntBASIC1.61□□□□□ -2.15
HOXC9P31274 SNORA12.1-201ENST00000390873 148 ntBASIC1.61□□□□□ -2.15
HOXC9P31274 MIR934-201ENST00000401241 83 ntBASIC1.61□□□□□ -2.15
HOXC9P31274 MTCO2P33-201ENST00000402100 465 ntBASIC1.61□□□□□ -2.15
HOXC9P31274 RPL23AP54-201ENST00000495129 419 ntBASIC1.61□□□□□ -2.15
HOXC9P31274 AC024405.2-202ENST00000532731 184 ntBASIC1.61□□□□□ -2.15
HOXC9P31274 POLR3GP1-201ENST00000594073 261 ntBASIC1.61□□□□□ -2.15
HOXC9P31274 SNORA28-201ENST00000606769 126 ntBASIC1.61□□□□□ -2.15
HOXC9P31274 MIR8063-201ENST00000621930 81 ntBASIC1.61□□□□□ -2.15
HOXC9P31274 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HOXC9P31274 RNU6-801P-201ENST00000364087 105 ntBASIC1.6□□□□□ -2.15
HOXC9P31274 Y_RNA.237-201ENST00000364439 102 ntBASIC1.6□□□□□ -2.15
HOXC9P31274 U8.7-201ENST00000364940 136 ntBASIC1.6□□□□□ -2.15
HOXC9P31274 SNORA72.4-201ENST00000384174 132 ntBASIC1.6□□□□□ -2.15
HOXC9P31274 SNORA26.5-201ENST00000391215 123 ntBASIC1.6□□□□□ -2.15
HOXC9P31274 AC104332.1-201ENST00000440471 797 ntBASIC1.6□□□□□ -2.15
HOXC9P31274 MTND4LP30-201ENST00000454092 297 ntBASIC1.6□□□□□ -2.15
HOXC9P31274 SERF1AP1-201ENST00000514575 187 ntBASIC1.6□□□□□ -2.15
HOXC9P31274 AC136628.3-201ENST00000521868 290 ntBASIC1.6□□□□□ -2.15
HOXC9P31274 AP001282.2-201ENST00000616149 309 ntBASIC1.6□□□□□ -2.15
HOXC9P31274 RMST_2.1-201ENST00000617263 136 ntBASIC1.6□□□□□ -2.15
HOXC9P31274 MIR548AY-201ENST00000617669 107 ntBASIC1.6□□□□□ -2.15
HOXC9P31274 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.6□□□□□ -2.15
HOXC9P31274 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
HOXC9P31274 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.59□□□□□ -2.15
HOXC9P31274 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
HOXC9P31274 SNORD68-201ENST00000363214 84 ntBASIC1.59□□□□□ -2.15
HOXC9P31274 Y_RNA.133-201ENST00000363428 110 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms