Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 USP9YP23-201ENST00000455085 407 ntBASIC-0.11□□□□□ -2.43
COL4A5P29400 AC093534.1-201ENST00000504977 132 ntBASIC-0.11□□□□□ -2.43
COL4A5P29400 AC010486.3-201ENST00000511602 785 ntBASIC-0.11□□□□□ -2.43
COL4A5P29400 RN7SKP298-201ENST00000515950 94 ntBASIC-0.11□□□□□ -2.43
COL4A5P29400 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.11□□□□□ -2.43
COL4A5P29400 AC090897.1-201ENST00000580909 226 ntBASIC-0.11□□□□□ -2.43
COL4A5P29400 MIR4290-201ENST00000583807 95 ntBASIC-0.11□□□□□ -2.43
COL4A5P29400 AC005972.2-201ENST00000604690 348 ntBASIC-0.11□□□□□ -2.43
COL4A5P29400 AC104408.1-201ENST00000605241 170 ntBASIC-0.11□□□□□ -2.43
COL4A5P29400 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
COL4A5P29400 SNORA32.1-201ENST00000364514 115 ntBASIC-0.12□□□□□ -2.43
COL4A5P29400 SNORD38B-201ENST00000384690 67 ntBASIC-0.12□□□□□ -2.43
COL4A5P29400 MIR635-201ENST00000384830 98 ntBASIC-0.12□□□□□ -2.43
COL4A5P29400 U8.17-201ENST00000391292 132 ntBASIC-0.12□□□□□ -2.43
COL4A5P29400 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
COL4A5P29400 MIR873-201ENST00000401120 77 ntBASIC-0.12□□□□□ -2.43
COL4A5P29400 RNU6-855P-201ENST00000410395 104 ntBASIC-0.12□□□□□ -2.43
COL4A5P29400 SNORD83.1-201ENST00000411362 77 ntBASIC-0.12□□□□□ -2.43
COL4A5P29400 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.12□□□□□ -2.43
COL4A5P29400 AC083798.1-201ENST00000472671 131 ntBASIC-0.12□□□□□ -2.43
COL4A5P29400 RNU6-848P-201ENST00000515948 107 ntBASIC-0.12□□□□□ -2.43
COL4A5P29400 RNU6-617P-201ENST00000516147 107 ntBASIC-0.12□□□□□ -2.43
COL4A5P29400 RNU6-473P-201ENST00000516164 107 ntBASIC-0.12□□□□□ -2.43
COL4A5P29400 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.12□□□□□ -2.43
COL4A5P29400 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.12□□□□□ -2.43
COL4A5P29400 LRRC34P1-201ENST00000542742 915 ntBASIC-0.12□□□□□ -2.43
COL4A5P29400 MIR548AO-201ENST00000579992 96 ntBASIC-0.12□□□□□ -2.43
COL4A5P29400 SNORD38B-202ENST00000625943 69 ntBASIC-0.12□□□□□ -2.43
COL4A5P29400 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.12□□□□□ -2.43
COL4A5P29400 ZNF299P-201ENST00000406845 1804 ntBASIC-0.12□□□□□ -2.43
COL4A5P29400 RNU6-595P-201ENST00000363944 107 ntBASIC-0.13□□□□□ -2.43
COL4A5P29400 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.13□□□□□ -2.43
COL4A5P29400 RNA5SP517-201ENST00000364724 117 ntBASIC-0.13□□□□□ -2.43
COL4A5P29400 RNU6-125P-201ENST00000384505 107 ntBASIC-0.13□□□□□ -2.43
COL4A5P29400 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.13□□□□□ -2.43
COL4A5P29400 MIR643-201ENST00000385267 97 ntBASIC-0.13□□□□□ -2.43
COL4A5P29400 RNA5SP496-201ENST00000391240 109 ntBASIC-0.13□□□□□ -2.43
COL4A5P29400 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.13□□□□□ -2.43
COL4A5P29400 RNA5SP95-201ENST00000410319 137 ntBASIC-0.13□□□□□ -2.43
COL4A5P29400 AL445567.1-201ENST00000439121 144 ntBASIC-0.13□□□□□ -2.43
COL4A5P29400 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.13□□□□□ -2.43
COL4A5P29400 MIR18B-201ENST00000454574 71 ntBASIC-0.13□□□□□ -2.43
COL4A5P29400 MTND3P7-201ENST00000474435 343 ntBASIC-0.13□□□□□ -2.43
COL4A5P29400 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.13□□□□□ -2.43
COL4A5P29400 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.13□□□□□ -2.43
COL4A5P29400 MIR4771-2-201ENST00000577758 74 ntBASIC-0.13□□□□□ -2.43
COL4A5P29400 MIR4771-1-201ENST00000582617 74 ntBASIC-0.13□□□□□ -2.43
COL4A5P29400 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.13□□□□□ -2.43
COL4A5P29400 AC124864.2-201ENST00000624736 186 ntBASIC-0.13□□□□□ -2.43
COL4A5P29400 MIR3674-201ENST00000636576 68 ntBASIC-0.13□□□□□ -2.43
COL4A5P29400 SNORA72.1-201ENST00000363485 129 ntBASIC-0.14□□□□□ -2.43
COL4A5P29400 SNORA32.3-201ENST00000384772 121 ntBASIC-0.14□□□□□ -2.43
COL4A5P29400 SNORA75.6-201ENST00000391318 127 ntBASIC-0.14□□□□□ -2.43
COL4A5P29400 EIF1P2-201ENST00000428233 350 ntBASIC-0.14□□□□□ -2.43
COL4A5P29400 MIR3672-201ENST00000584290 82 ntBASIC-0.14□□□□□ -2.43
COL4A5P29400 DLEU2_1.1-201ENST00000612089 120 ntBASIC-0.14□□□□□ -2.43
COL4A5P29400 DLEU2_1.2-201ENST00000614667 120 ntBASIC-0.14□□□□□ -2.43
COL4A5P29400 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.14□□□□□ -2.43
COL4A5P29400 RNU6-369P-201ENST00000362515 102 ntBASIC-0.14□□□□□ -2.43
COL4A5P29400 RNU6-324P-201ENST00000363957 106 ntBASIC-0.14□□□□□ -2.43
COL4A5P29400 RNU6-1042P-201ENST00000384204 107 ntBASIC-0.14□□□□□ -2.43
COL4A5P29400 MIR125B2-201ENST00000385128 89 ntBASIC-0.14□□□□□ -2.43
COL4A5P29400 RNU6-847P-201ENST00000411115 108 ntBASIC-0.14□□□□□ -2.43
COL4A5P29400 SNRPGP10-201ENST00000432323 225 ntBASIC-0.14□□□□□ -2.43
COL4A5P29400 MTND3P21-201ENST00000433774 331 ntBASIC-0.14□□□□□ -2.43
COL4A5P29400 RNU6-625P-201ENST00000459412 107 ntBASIC-0.14□□□□□ -2.43
COL4A5P29400 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-0.14□□□□□ -2.43
COL4A5P29400 MIR2355-201ENST00000517199 87 ntBASIC-0.14□□□□□ -2.43
COL4A5P29400 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.14□□□□□ -2.43
COL4A5P29400 RBM11P1-201ENST00000604951 799 ntBASIC-0.14□□□□□ -2.43
COL4A5P29400 AF250324.2-201ENST00000608299 610 ntBASIC-0.14□□□□□ -2.43
COL4A5P29400 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.14□□□□□ -2.43
COL4A5P29400 RNU6-1085P-201ENST00000363576 107 ntBASIC-0.15□□□□□ -2.43
COL4A5P29400 SNORD116-11-201ENST00000383882 92 ntBASIC-0.15□□□□□ -2.43
COL4A5P29400 RNY3P5-201ENST00000384127 102 ntBASIC-0.15□□□□□ -2.43
COL4A5P29400 MIR224-201ENST00000384889 81 ntBASIC-0.15□□□□□ -2.43
COL4A5P29400 SNORD100-201ENST00000408573 76 ntBASIC-0.15□□□□□ -2.43
COL4A5P29400 RNU4-55P-201ENST00000410731 137 ntBASIC-0.15□□□□□ -2.43
COL4A5P29400 AL353193.1-201ENST00000421444 268 ntBASIC-0.15□□□□□ -2.43
COL4A5P29400 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.15□□□□□ -2.43
COL4A5P29400 RPL17P19-201ENST00000489069 552 ntBASIC-0.15□□□□□ -2.43
COL4A5P29400 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.15□□□□□ -2.43
COL4A5P29400 RNU6-448P-201ENST00000517052 107 ntBASIC-0.15□□□□□ -2.43
COL4A5P29400 AC060788.1-201ENST00000521318 469 ntBASIC-0.15□□□□□ -2.43
COL4A5P29400 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.15□□□□□ -2.43
COL4A5P29400 MIR4431-201ENST00000579990 94 ntBASIC-0.15□□□□□ -2.43
COL4A5P29400 AP001330.5-201ENST00000607176 411 ntBASIC-0.15□□□□□ -2.43
COL4A5P29400 DISC2.1-201ENST00000612827 205 ntBASIC-0.15□□□□□ -2.43
COL4A5P29400 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.15□□□□□ -2.43
COL4A5P29400 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.16□□□□□ -2.44
COL4A5P29400 MIR570-201ENST00000384917 97 ntBASIC-0.16□□□□□ -2.44
COL4A5P29400 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.16□□□□□ -2.44
COL4A5P29400 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.16□□□□□ -2.44
COL4A5P29400 AL355297.3-201ENST00000604082 446 ntBASIC-0.16□□□□□ -2.44
COL4A5P29400 SNORA42.1-201ENST00000363515 137 ntBASIC-0.17□□□□□ -2.44
COL4A5P29400 U8.5-201ENST00000364528 136 ntBASIC-0.17□□□□□ -2.44
COL4A5P29400 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.17□□□□□ -2.44
COL4A5P29400 AL031667.1-201ENST00000440222 725 ntBASIC-0.17□□□□□ -2.44
COL4A5P29400 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.17□□□□□ -2.44
COL4A5P29400 snoU13.16-201ENST00000459350 104 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms