Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 SNORA40.9-201ENST00000515895 93 ntBASIC-0.22□□□□□ -2.44
HLA-DMBP28068 RNU2-13P-201ENST00000515909 113 ntBASIC-0.22□□□□□ -2.44
HLA-DMBP28068 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.23□□□□□ -2.45
HLA-DMBP28068 Y_RNA.409-201ENST00000383990 98 ntBASIC-0.23□□□□□ -2.45
HLA-DMBP28068 MIR610-201ENST00000385139 96 ntBASIC-0.23□□□□□ -2.45
HLA-DMBP28068 MIR214-201ENST00000385214 110 ntBASIC-0.23□□□□□ -2.45
HLA-DMBP28068 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.23□□□□□ -2.45
HLA-DMBP28068 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.23□□□□□ -2.45
HLA-DMBP28068 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.23□□□□□ -2.45
HLA-DMBP28068 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.23□□□□□ -2.45
HLA-DMBP28068 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.23□□□□□ -2.45
HLA-DMBP28068 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.23□□□□□ -2.45
HLA-DMBP28068 SNORD92-201ENST00000585078 85 ntBASIC-0.23□□□□□ -2.45
HLA-DMBP28068 AC087685.1-201ENST00000587507 141 ntBASIC-0.23□□□□□ -2.45
HLA-DMBP28068 MIR6755-201ENST00000619993 66 ntBASIC-0.23□□□□□ -2.45
HLA-DMBP28068 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.23□□□□□ -2.45
HLA-DMBP28068 SNORA72.1-201ENST00000363485 129 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 SNORA63C-201ENST00000364578 129 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 SNORD116-11-201ENST00000383882 92 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 RNU6-318P-201ENST00000384283 103 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 RNU6-306P-201ENST00000384617 107 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 MIR125B2-201ENST00000385128 89 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 RNU6-747P-201ENST00000390928 104 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 RNU6-241P-201ENST00000391148 104 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 RNU6-447P-201ENST00000410293 104 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 RNU6-355P-201ENST00000410427 104 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 RNU6-791P-201ENST00000410467 104 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 RNU6-705P-201ENST00000410601 104 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 RNU6-860P-201ENST00000410860 104 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 RNU2-61P-201ENST00000411069 191 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 RNU6-785P-201ENST00000411324 104 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 PDCL2P1-201ENST00000419302 352 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 HMGN1P33-201ENST00000432945 451 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.24□□□□□ -2.45
HLA-DMBP28068 RNU7-102P-201ENST00000458948 62 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.24□□□□□ -2.45
HLA-DMBP28068 SNORA18.4-201ENST00000516440 124 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 RNA5SP268-201ENST00000516828 124 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 MIR4743-201ENST00000584576 69 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 U6.90-201ENST00000614007 104 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 U6.70-201ENST00000620287 104 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 AC023510.2-201ENST00000622162 746 ntBASIC-0.24□□□□□ -2.45
HLA-DMBP28068 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.25□□□□□ -2.45
HLA-DMBP28068 RNU6-879P-201ENST00000364328 108 ntBASIC-0.25□□□□□ -2.45
HLA-DMBP28068 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.25□□□□□ -2.45
HLA-DMBP28068 PCNPP3-201ENST00000393579 471 ntBASIC-0.25□□□□□ -2.45
HLA-DMBP28068 AL031003.1-201ENST00000404229 172 ntBASIC-0.25□□□□□ -2.45
HLA-DMBP28068 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.25□□□□□ -2.45
HLA-DMBP28068 AC005042.3-201ENST00000453230 174 ntBASIC-0.25□□□□□ -2.45
HLA-DMBP28068 MIR18B-201ENST00000454574 71 ntBASIC-0.25□□□□□ -2.45
HLA-DMBP28068 RNU7-62P-201ENST00000458856 62 ntBASIC-0.25□□□□□ -2.45
HLA-DMBP28068 AC091959.1-201ENST00000495857 238 ntBASIC-0.25□□□□□ -2.45
HLA-DMBP28068 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.25□□□□□ -2.45
HLA-DMBP28068 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.25□□□□□ -2.45
HLA-DMBP28068 AC005972.2-201ENST00000604690 348 ntBASIC-0.25□□□□□ -2.45
HLA-DMBP28068 uc_338.6-201ENST00000613544 171 ntBASIC-0.25□□□□□ -2.45
HLA-DMBP28068 RNU6-1085P-201ENST00000363576 107 ntBASIC-0.26□□□□□ -2.45
HLA-DMBP28068 RNU6-923P-201ENST00000364753 107 ntBASIC-0.26□□□□□ -2.45
HLA-DMBP28068 SNORA1.2-201ENST00000365189 134 ntBASIC-0.26□□□□□ -2.45
HLA-DMBP28068 RNA5SP117-201ENST00000365294 118 ntBASIC-0.26□□□□□ -2.45
HLA-DMBP28068 RNU6-442P-201ENST00000383968 104 ntBASIC-0.26□□□□□ -2.45
HLA-DMBP28068 RNU6-364P-201ENST00000384387 107 ntBASIC-0.26□□□□□ -2.45
HLA-DMBP28068 MIR145-201ENST00000384967 88 ntBASIC-0.26□□□□□ -2.45
HLA-DMBP28068 MIR644A-201ENST00000385262 94 ntBASIC-0.26□□□□□ -2.45
HLA-DMBP28068 RNU6-847P-201ENST00000411115 108 ntBASIC-0.26□□□□□ -2.45
HLA-DMBP28068 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.26□□□□□ -2.45
HLA-DMBP28068 SCARNA8-201ENST00000515924 131 ntBASIC-0.26□□□□□ -2.45
HLA-DMBP28068 RNU6-848P-201ENST00000515948 107 ntBASIC-0.26□□□□□ -2.45
HLA-DMBP28068 RNU6-617P-201ENST00000516147 107 ntBASIC-0.26□□□□□ -2.45
HLA-DMBP28068 RNU6-473P-201ENST00000516164 107 ntBASIC-0.26□□□□□ -2.45
HLA-DMBP28068 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.26□□□□□ -2.45
HLA-DMBP28068 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.26□□□□□ -2.45
HLA-DMBP28068 AC133485.4-201ENST00000561835 220 ntBASIC-0.26□□□□□ -2.45
HLA-DMBP28068 MIR4802-201ENST00000581881 80 ntBASIC-0.26□□□□□ -2.45
HLA-DMBP28068 SNORD114-31-201ENST00000363219 75 ntBASIC-0.27□□□□□ -2.45
HLA-DMBP28068 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.27□□□□□ -2.45
HLA-DMBP28068 RNU6-324P-201ENST00000363957 106 ntBASIC-0.27□□□□□ -2.45
HLA-DMBP28068 RNU6-268P-201ENST00000364174 107 ntBASIC-0.27□□□□□ -2.45
HLA-DMBP28068 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.27□□□□□ -2.45
HLA-DMBP28068 RNU6-842P-201ENST00000384269 107 ntBASIC-0.27□□□□□ -2.45
HLA-DMBP28068 RNU6-127P-201ENST00000390897 107 ntBASIC-0.27□□□□□ -2.45
HLA-DMBP28068 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.27□□□□□ -2.45
HLA-DMBP28068 AC090844.1-201ENST00000422019 156 ntBASIC-0.27□□□□□ -2.45
HLA-DMBP28068 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.27□□□□□ -2.45
HLA-DMBP28068 SEPT14P3-201ENST00000439401 183 ntBASIC-0.27□□□□□ -2.45
HLA-DMBP28068 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-0.27□□□□□ -2.45
HLA-DMBP28068 AL732372.2-207ENST00000445840 183 ntBASIC-0.27□□□□□ -2.45
HLA-DMBP28068 SEPT14P2-201ENST00000453405 183 ntBASIC-0.27□□□□□ -2.45
HLA-DMBP28068 SEPT14P4-201ENST00000513445 186 ntBASIC-0.27□□□□□ -2.45
HLA-DMBP28068 Y_RNA.693-201ENST00000516641 110 ntBASIC-0.27□□□□□ -2.45
HLA-DMBP28068 RNU6-448P-201ENST00000517052 107 ntBASIC-0.27□□□□□ -2.45
HLA-DMBP28068 RNU7-181P-201ENST00000517234 74 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms