Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 RNU1-117P-201ENST00000517041 158 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 CYCSP23-201ENST00000519781 313 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 AP002001.1-203ENST00000534002 267 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.92□□□□□ -2.26
COL5A1P20908 MIR5692C2-201ENST00000577959 77 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 AC006006.1-201ENST00000603082 144 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 AC037487.3-201ENST00000606668 112 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 MIR8087-201ENST00000612745 78 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.92□□□□□ -2.26
COL5A1P20908 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
COL5A1P20908 Y_RNA.16-201ENST00000362421 102 ntBASIC0.91□□□□□ -2.26
COL5A1P20908 SNORA27.1-201ENST00000362604 124 ntBASIC0.91□□□□□ -2.26
COL5A1P20908 Y_RNA.99-201ENST00000363138 105 ntBASIC0.91□□□□□ -2.26
COL5A1P20908 RNU6-1248P-201ENST00000391096 64 ntBASIC0.91□□□□□ -2.26
COL5A1P20908 RNU6-1203P-201ENST00000410703 110 ntBASIC0.91□□□□□ -2.26
COL5A1P20908 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.91□□□□□ -2.26
COL5A1P20908 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.91□□□□□ -2.26
COL5A1P20908 MIR3169-201ENST00000578032 83 ntBASIC0.91□□□□□ -2.26
COL5A1P20908 MIR3671-201ENST00000580455 88 ntBASIC0.91□□□□□ -2.26
COL5A1P20908 MIR4438-201ENST00000585271 93 ntBASIC0.91□□□□□ -2.26
COL5A1P20908 AC141273.2-201ENST00000618989 130 ntBASIC0.91□□□□□ -2.26
COL5A1P20908 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.91□□□□□ -2.26
COL5A1P20908 MIR8062-201ENST00000621515 85 ntBASIC0.91□□□□□ -2.26
COL5A1P20908 AC130454.1-201ENST00000622948 401 ntBASIC0.91□□□□□ -2.26
COL5A1P20908 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.91□□□□□ -2.26
COL5A1P20908 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
COL5A1P20908 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.9□□□□□ -2.26
COL5A1P20908 SNORD81.1-201ENST00000363064 77 ntBASIC0.9□□□□□ -2.27
COL5A1P20908 Y_RNA.136-201ENST00000363444 102 ntBASIC0.9□□□□□ -2.27
COL5A1P20908 RNU6-379P-201ENST00000363813 104 ntBASIC0.9□□□□□ -2.27
COL5A1P20908 RNU6-1019P-201ENST00000364424 107 ntBASIC0.9□□□□□ -2.27
COL5A1P20908 Y_RNA.376-201ENST00000365638 108 ntBASIC0.9□□□□□ -2.27
COL5A1P20908 Y_RNA.498-201ENST00000384460 102 ntBASIC0.9□□□□□ -2.27
COL5A1P20908 RNA5SP212-201ENST00000391223 107 ntBASIC0.9□□□□□ -2.27
COL5A1P20908 AL031003.1-201ENST00000404229 172 ntBASIC0.9□□□□□ -2.27
COL5A1P20908 AC004941.2-201ENST00000427009 228 ntBASIC0.9□□□□□ -2.27
COL5A1P20908 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.9□□□□□ -2.27
COL5A1P20908 RPS27P22-201ENST00000478056 241 ntBASIC0.9□□□□□ -2.27
COL5A1P20908 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.9□□□□□ -2.27
COL5A1P20908 RNA5SP20-201ENST00000515976 84 ntBASIC0.9□□□□□ -2.27
COL5A1P20908 RNU6-966P-201ENST00000516479 104 ntBASIC0.9□□□□□ -2.27
COL5A1P20908 RNU6-1271P-201ENST00000517049 105 ntBASIC0.9□□□□□ -2.27
COL5A1P20908 RNU6-667P-201ENST00000517186 102 ntBASIC0.9□□□□□ -2.27
COL5A1P20908 MIR3145-201ENST00000580727 82 ntBASIC0.9□□□□□ -2.27
COL5A1P20908 AL512605.2-201ENST00000592972 256 ntBASIC0.9□□□□□ -2.27
COL5A1P20908 AC010900.2-201ENST00000604508 210 ntBASIC0.9□□□□□ -2.27
COL5A1P20908 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.9□□□□□ -2.27
COL5A1P20908 AC013791.1-201ENST00000616619 62 ntBASIC0.9□□□□□ -2.27
COL5A1P20908 MIR6513-201ENST00000621188 64 ntBASIC0.9□□□□□ -2.27
COL5A1P20908 AC006001.4-201ENST00000622243 395 ntBASIC0.9□□□□□ -2.27
COL5A1P20908 AC008873.1-201ENST00000625051 138 ntBASIC0.9□□□□□ -2.27
COL5A1P20908 Y_RNA.287-201ENST00000364853 94 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 RNU6-702P-201ENST00000364982 107 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 RNU6-290P-201ENST00000365212 101 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 Y_RNA.352-201ENST00000365439 102 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 SNORA25B-201ENST00000365507 128 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 Y_RNA.401-201ENST00000383965 117 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 Y_RNA.452-201ENST00000384202 108 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 SNORD116-13-201ENST00000384408 92 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 RNU6-505P-201ENST00000384427 107 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
COL5A1P20908 RNU6-159P-201ENST00000391080 106 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 MIR1253-201ENST00000408273 105 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 RNU6-1186P-201ENST00000410429 97 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 RNU6-847P-201ENST00000411115 108 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.89□□□□□ -2.27
COL5A1P20908 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.89□□□□□ -2.27
COL5A1P20908 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.89□□□□□ -2.27
COL5A1P20908 RPS23P4-201ENST00000487908 423 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 AL163195.1-201ENST00000496941 348 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 RNU6-107P-201ENST00000516643 102 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 RNU6-856P-201ENST00000516959 98 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 AL078604.3-201ENST00000615580 211 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.89□□□□□ -2.27
COL5A1P20908 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
COL5A1P20908 AL589743.1-201ENST00000551932 2712 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 MIR340-201ENST00000362125 95 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 Y_RNA.310-201ENST00000365063 113 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 Y_RNA.341-201ENST00000365341 102 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 Y_RNA.618-201ENST00000410949 107 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 AC244636.1-201ENST00000421152 228 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 TOMM22P2-201ENST00000430735 237 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 HMGN2P34-201ENST00000437647 269 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 RPS20P10-201ENST00000451209 253 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 SUMO1P2-201ENST00000452524 304 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 AC091179.3-201ENST00000474761 144 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 RNU6-970P-201ENST00000516312 107 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 RNU6-155P-201ENST00000516347 100 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 RNU6-1337P-201ENST00000516525 95 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 RNA5SP137-201ENST00000516833 135 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 AC025647.1-201ENST00000517879 253 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 MIR4503-201ENST00000582187 83 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 AC005972.2-201ENST00000604690 348 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 AL590240.4-201ENST00000616908 390 ntBASIC0.89□□□□□ -2.27
COL5A1P20908 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
COL5A1P20908 Y_RNA.82-201ENST00000363000 102 ntBASIC0.88□□□□□ -2.27
COL5A1P20908 Y_RNA.92-201ENST00000363043 102 ntBASIC0.88□□□□□ -2.27
COL5A1P20908 Y_RNA.235-201ENST00000364412 102 ntBASIC0.88□□□□□ -2.27
COL5A1P20908 Y_RNA.306-201ENST00000365015 102 ntBASIC0.88□□□□□ -2.27
COL5A1P20908 Y_RNA.308-201ENST00000365043 101 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms