Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RNA5SP181-201ENST00000410246 98 ntBASIC2.87□□□□□ -1.95
ERCC3P19447 snoU13.26-201ENST00000459452 105 ntBASIC2.87□□□□□ -1.95
ERCC3P19447 OR9P1P-201ENST00000496431 281 ntBASIC2.87□□□□□ -1.95
ERCC3P19447 RNU6-1299P-201ENST00000516316 100 ntBASIC2.87□□□□□ -1.95
ERCC3P19447 RNU7-149P-201ENST00000516739 59 ntBASIC2.87□□□□□ -1.95
ERCC3P19447 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.87□□□□□ -1.95
ERCC3P19447 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.87□□□□□ -1.95
ERCC3P19447 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.87□□□□□ -1.95
ERCC3P19447 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.87□□□□□ -1.95
ERCC3P19447 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.87□□□□□ -1.95
ERCC3P19447 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
ERCC3P19447 Y_RNA.180-201ENST00000363867 113 ntBASIC2.86□□□□□ -1.95
ERCC3P19447 RNU6-163P-201ENST00000384396 106 ntBASIC2.86□□□□□ -1.95
ERCC3P19447 RNU2-70P-201ENST00000410718 179 ntBASIC2.86□□□□□ -1.95
ERCC3P19447 RNA5SP100-201ENST00000410903 110 ntBASIC2.86□□□□□ -1.95
ERCC3P19447 RNA5SP59-201ENST00000410922 110 ntBASIC2.86□□□□□ -1.95
ERCC3P19447 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.86□□□□□ -1.95
ERCC3P19447 RNA5SP481-201ENST00000516814 122 ntBASIC2.86□□□□□ -1.95
ERCC3P19447 SNORA31.17-201ENST00000516953 127 ntBASIC2.86□□□□□ -1.95
ERCC3P19447 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.86□□□□□ -1.95
ERCC3P19447 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.86□□□□□ -1.95
ERCC3P19447 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.86□□□□□ -1.95
ERCC3P19447 Y_RNA.23-201ENST00000362496 106 ntBASIC2.85□□□□□ -1.95
ERCC3P19447 SNORD45.3-201ENST00000363836 72 ntBASIC2.85□□□□□ -1.95
ERCC3P19447 SNORA16B-201ENST00000364674 135 ntBASIC2.85□□□□□ -1.95
ERCC3P19447 Y_RNA.432-201ENST00000384087 111 ntBASIC2.85□□□□□ -1.95
ERCC3P19447 RNU6-296P-201ENST00000384608 107 ntBASIC2.85□□□□□ -1.95
ERCC3P19447 MIR522-201ENST00000385071 87 ntBASIC2.85□□□□□ -1.95
ERCC3P19447 PCNPP3-201ENST00000393579 471 ntBASIC2.85□□□□□ -1.95
ERCC3P19447 AL359511.1-201ENST00000402970 211 ntBASIC2.85□□□□□ -1.95
ERCC3P19447 RN7SKP192-201ENST00000411291 327 ntBASIC2.85□□□□□ -1.95
ERCC3P19447 snoU13.27-201ENST00000459278 104 ntBASIC2.85□□□□□ -1.95
ERCC3P19447 AL021707.8-201ENST00000609428 183 ntBASIC2.85□□□□□ -1.95
ERCC3P19447 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.85□□□□□ -1.95
ERCC3P19447 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
ERCC3P19447 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
ERCC3P19447 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
ERCC3P19447 AL596028.1-201ENST00000326971 197 ntBASIC2.84□□□□□ -1.95
ERCC3P19447 SNORA80E-201ENST00000384744 137 ntBASIC2.84□□□□□ -1.95
ERCC3P19447 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.84□□□□□ -1.95
ERCC3P19447 RNA5SP425-201ENST00000410336 112 ntBASIC2.84□□□□□ -1.95
ERCC3P19447 SNRPGP8-201ENST00000454064 226 ntBASIC2.84□□□□□ -1.95
ERCC3P19447 snoU13.15-201ENST00000459407 104 ntBASIC2.84□□□□□ -1.95
ERCC3P19447 UBL5P3-201ENST00000475112 231 ntBASIC2.84□□□□□ -1.95
ERCC3P19447 NDUFA4P2-201ENST00000489989 244 ntBASIC2.84□□□□□ -1.95
ERCC3P19447 AC234781.5-201ENST00000508429 271 ntBASIC2.84□□□□□ -1.95
ERCC3P19447 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.84□□□□□ -1.95
ERCC3P19447 MIR6840-201ENST00000611937 71 ntBASIC2.84□□□□□ -1.95
ERCC3P19447 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.83□□□□□ -1.96
ERCC3P19447 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.83□□□□□ -1.96
ERCC3P19447 SNORD14E-201ENST00000364009 85 ntBASIC2.83□□□□□ -1.96
ERCC3P19447 snoU2-30.1-201ENST00000365012 70 ntBASIC2.83□□□□□ -1.96
ERCC3P19447 MIR4431-201ENST00000579990 94 ntBASIC2.83□□□□□ -1.96
ERCC3P19447 MIR7843-201ENST00000622274 79 ntBASIC2.83□□□□□ -1.96
ERCC3P19447 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.83□□□□□ -1.96
ERCC3P19447 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ERCC3P19447 Y_RNA.521-201ENST00000384560 114 ntBASIC2.82□□□□□ -1.96
ERCC3P19447 RN7SKP223-201ENST00000410582 62 ntBASIC2.82□□□□□ -1.96
ERCC3P19447 RNU5E-9P-201ENST00000411164 104 ntBASIC2.82□□□□□ -1.96
ERCC3P19447 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.82□□□□□ -1.96
ERCC3P19447 FTH1P12-201ENST00000432137 551 ntBASIC2.82□□□□□ -1.96
ERCC3P19447 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.82□□□□□ -1.96
ERCC3P19447 MRPS17P9-201ENST00000511924 393 ntBASIC2.82□□□□□ -1.96
ERCC3P19447 AC107027.2-201ENST00000512197 115 ntBASIC2.82□□□□□ -1.96
ERCC3P19447 SNORD77.4-201ENST00000516158 81 ntBASIC2.82□□□□□ -1.96
ERCC3P19447 RNU6-1116P-201ENST00000517269 99 ntBASIC2.82□□□□□ -1.96
ERCC3P19447 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.82□□□□□ -1.96
ERCC3P19447 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.82□□□□□ -1.96
ERCC3P19447 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.82□□□□□ -1.96
ERCC3P19447 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ERCC3P19447 RNU6-804P-201ENST00000384286 107 ntBASIC2.81□□□□□ -1.96
ERCC3P19447 RNU6-1031P-201ENST00000384773 107 ntBASIC2.81□□□□□ -1.96
ERCC3P19447 MIR504-201ENST00000385065 83 ntBASIC2.81□□□□□ -1.96
ERCC3P19447 SNORD72-201ENST00000390994 80 ntBASIC2.81□□□□□ -1.96
ERCC3P19447 RPL23AP6-201ENST00000446637 472 ntBASIC2.81□□□□□ -1.96
ERCC3P19447 AC046143.2-201ENST00000609789 160 ntBASIC2.81□□□□□ -1.96
ERCC3P19447 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ERCC3P19447 RNA5SP456-201ENST00000364002 114 ntBASIC2.8□□□□□ -1.96
ERCC3P19447 Y_RNA.272-201ENST00000364696 102 ntBASIC2.8□□□□□ -1.96
ERCC3P19447 SNORD50B-201ENST00000364995 70 ntBASIC2.8□□□□□ -1.96
ERCC3P19447 RNU6-643P-201ENST00000384018 107 ntBASIC2.8□□□□□ -1.96
ERCC3P19447 RNA5SP212-201ENST00000391223 107 ntBASIC2.8□□□□□ -1.96
ERCC3P19447 CALM2P4-201ENST00000430810 426 ntBASIC2.8□□□□□ -1.96
ERCC3P19447 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.8□□□□□ -1.96
ERCC3P19447 RNU7-12P-201ENST00000516030 62 ntBASIC2.8□□□□□ -1.96
ERCC3P19447 SNORD45.4-201ENST00000516629 73 ntBASIC2.8□□□□□ -1.96
ERCC3P19447 MIR4648-201ENST00000580107 72 ntBASIC2.8□□□□□ -1.96
ERCC3P19447 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ERCC3P19447 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ERCC3P19447 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
ERCC3P19447 RNU6-1062P-201ENST00000383908 107 ntBASIC2.79□□□□□ -1.96
ERCC3P19447 SNORD116-18-201ENST00000383961 92 ntBASIC2.79□□□□□ -1.96
ERCC3P19447 MIR17-201ENST00000385012 84 ntBASIC2.79□□□□□ -1.96
ERCC3P19447 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.79□□□□□ -1.96
ERCC3P19447 AC114811.1-201ENST00000507207 168 ntBASIC2.79□□□□□ -1.96
ERCC3P19447 MIR4662B-201ENST00000579498 81 ntBASIC2.79□□□□□ -1.96
ERCC3P19447 AC120024.3-201ENST00000603167 156 ntBASIC2.79□□□□□ -1.96
ERCC3P19447 AC103810.6-201ENST00000606708 136 ntBASIC2.79□□□□□ -1.96
ERCC3P19447 U8.16-201ENST00000391279 133 ntBASIC2.78□□□□□ -1.96
ERCC3P19447 SNORA26-201ENST00000391286 122 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms