Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
ATF4P18848 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ATF4P18848 MIR424-201ENST00000362227 98 ntBASIC2.44□□□□□ -2.02
ATF4P18848 RNU6-268P-201ENST00000364174 107 ntBASIC2.44□□□□□ -2.02
ATF4P18848 MIR660-201ENST00000385235 97 ntBASIC2.44□□□□□ -2.02
ATF4P18848 SNORA75.5-201ENST00000391291 81 ntBASIC2.44□□□□□ -2.02
ATF4P18848 MIR513C-201ENST00000401352 84 ntBASIC2.44□□□□□ -2.02
ATF4P18848 AC003982.1-202ENST00000469928 248 ntBASIC2.44□□□□□ -2.02
ATF4P18848 AC099513.1-201ENST00000490423 301 ntBASIC2.44□□□□□ -2.02
ATF4P18848 RNA5SP402-201ENST00000517148 110 ntBASIC2.44□□□□□ -2.02
ATF4P18848 MIR5680-201ENST00000577577 84 ntBASIC2.44□□□□□ -2.02
ATF4P18848 MIR4713-201ENST00000582691 75 ntBASIC2.44□□□□□ -2.02
ATF4P18848 MIR4325-201ENST00000583049 90 ntBASIC2.44□□□□□ -2.02
ATF4P18848 MIR3133-201ENST00000583157 78 ntBASIC2.44□□□□□ -2.02
ATF4P18848 uc_338.25-201ENST00000613756 156 ntBASIC2.44□□□□□ -2.02
ATF4P18848 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.44□□□□□ -2.02
ATF4P18848 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
ATF4P18848 MIR6073-201ENST00000352083 89 ntBASIC2.43□□□□□ -2.02
ATF4P18848 RNU6-1123P-201ENST00000362347 106 ntBASIC2.43□□□□□ -2.02
ATF4P18848 Y_RNA.66-201ENST00000362862 102 ntBASIC2.43□□□□□ -2.02
ATF4P18848 RNU6-774P-201ENST00000363238 107 ntBASIC2.43□□□□□ -2.02
ATF4P18848 RNU6-978P-201ENST00000364371 103 ntBASIC2.43□□□□□ -2.02
ATF4P18848 MIR144-201ENST00000384886 86 ntBASIC2.43□□□□□ -2.02
ATF4P18848 BX510359.1-201ENST00000456973 237 ntBASIC2.43□□□□□ -2.02
ATF4P18848 MIR4299-201ENST00000577899 72 ntBASIC2.43□□□□□ -2.02
ATF4P18848 MIR7112-201ENST00000616126 65 ntBASIC2.43□□□□□ -2.02
ATF4P18848 ICE2P2-201ENST00000483823 2787 ntBASIC2.42□□□□□ -2.02
ATF4P18848 RNU6-661P-201ENST00000362409 107 ntBASIC2.42□□□□□ -2.02
ATF4P18848 RNU6-888P-201ENST00000363010 101 ntBASIC2.42□□□□□ -2.02
ATF4P18848 RNU4-11P-201ENST00000365287 132 ntBASIC2.42□□□□□ -2.02
ATF4P18848 Y_RNA.343-201ENST00000365354 112 ntBASIC2.42□□□□□ -2.02
ATF4P18848 SNORD61-201ENST00000384252 73 ntBASIC2.42□□□□□ -2.02
ATF4P18848 RNU6-125P-201ENST00000384505 107 ntBASIC2.42□□□□□ -2.02
ATF4P18848 MIR452-201ENST00000385020 85 ntBASIC2.42□□□□□ -2.02
ATF4P18848 MIR548O-201ENST00000408583 114 ntBASIC2.42□□□□□ -2.02
ATF4P18848 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.42□□□□□ -2.02
ATF4P18848 AC096725.1-201ENST00000514266 313 ntBASIC2.42□□□□□ -2.02
ATF4P18848 RNU6-1270P-201ENST00000517128 108 ntBASIC2.42□□□□□ -2.02
ATF4P18848 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.42□□□□□ -2.02
ATF4P18848 MIR6895-201ENST00000613497 78 ntBASIC2.42□□□□□ -2.02
ATF4P18848 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ATF4P18848 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
ATF4P18848 Y_RNA.488-201ENST00000384403 102 ntBASIC2.41□□□□□ -2.02
ATF4P18848 Y_RNA.542-201ENST00000384641 111 ntBASIC2.41□□□□□ -2.02
ATF4P18848 AC090142.3-201ENST00000519012 385 ntBASIC2.41□□□□□ -2.02
ATF4P18848 AC112693.2-201ENST00000556538 232 ntBASIC2.41□□□□□ -2.02
ATF4P18848 MIR3658-201ENST00000636291 56 ntBASIC2.41□□□□□ -2.02
ATF4P18848 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
ATF4P18848 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
ATF4P18848 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
ATF4P18848 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
ATF4P18848 Y_RNA.215-201ENST00000364204 112 ntBASIC2.4□□□□□ -2.03
ATF4P18848 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
ATF4P18848 MIR1267-201ENST00000408723 78 ntBASIC2.4□□□□□ -2.03
ATF4P18848 SNRPGP14-201ENST00000435400 219 ntBASIC2.4□□□□□ -2.03
ATF4P18848 AC015922.2-201ENST00000435593 184 ntBASIC2.4□□□□□ -2.03
ATF4P18848 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.4□□□□□ -2.03
ATF4P18848 JTBP1-201ENST00000441314 247 ntBASIC2.4□□□□□ -2.03
ATF4P18848 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.4□□□□□ -2.03
ATF4P18848 SNORA18.4-201ENST00000516440 124 ntBASIC2.4□□□□□ -2.03
ATF4P18848 AC022254.1-201ENST00000567857 235 ntBASIC2.4□□□□□ -2.03
ATF4P18848 MIR548X2-201ENST00000579776 100 ntBASIC2.4□□□□□ -2.03
ATF4P18848 AL137847.3-201ENST00000611521 109 ntBASIC2.4□□□□□ -2.03
ATF4P18848 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.39□□□□□ -2.03
ATF4P18848 RN7SKP192-201ENST00000411291 327 ntBASIC2.39□□□□□ -2.03
ATF4P18848 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.39□□□□□ -2.03
ATF4P18848 AC093850.1-201ENST00000454121 251 ntBASIC2.39□□□□□ -2.03
ATF4P18848 MIR4778-201ENST00000577635 80 ntBASIC2.39□□□□□ -2.03
ATF4P18848 AL365205.2-201ENST00000594586 68 ntBASIC2.39□□□□□ -2.03
ATF4P18848 AC015726.2-201ENST00000620112 122 ntBASIC2.39□□□□□ -2.03
ATF4P18848 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ATF4P18848 RNU6-818P-201ENST00000364837 108 ntBASIC2.38□□□□□ -2.03
ATF4P18848 SNORD15B-201ENST00000384714 146 ntBASIC2.38□□□□□ -2.03
ATF4P18848 AC004965.1-201ENST00000413033 213 ntBASIC2.38□□□□□ -2.03
ATF4P18848 RNA5SP233-201ENST00000459153 113 ntBASIC2.38□□□□□ -2.03
ATF4P18848 S100A11P2-201ENST00000467589 312 ntBASIC2.38□□□□□ -2.03
ATF4P18848 RNU6-346P-201ENST00000516288 111 ntBASIC2.38□□□□□ -2.03
ATF4P18848 IGLV3-17-201ENST00000519099 244 ntBASIC2.38□□□□□ -2.03
ATF4P18848 MIR2682-201ENST00000580305 110 ntBASIC2.38□□□□□ -2.03
ATF4P18848 AC134878.1-201ENST00000619901 243 ntBASIC2.38□□□□□ -2.03
ATF4P18848 MIR622-201ENST00000638396 96 ntBASIC2.38□□□□□ -2.03
ATF4P18848 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.37□□□□□ -2.03
ATF4P18848 SNORD115-28-201ENST00000363931 81 ntBASIC2.37□□□□□ -2.03
ATF4P18848 RNU6-203P-201ENST00000384038 104 ntBASIC2.37□□□□□ -2.03
ATF4P18848 MIR136-201ENST00000385207 82 ntBASIC2.37□□□□□ -2.03
ATF4P18848 RNU6-588P-201ENST00000410281 105 ntBASIC2.37□□□□□ -2.03
ATF4P18848 RNA5SP127-201ENST00000411051 133 ntBASIC2.37□□□□□ -2.03
ATF4P18848 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.37□□□□□ -2.03
ATF4P18848 RNU7-25P-201ENST00000516544 62 ntBASIC2.37□□□□□ -2.03
ATF4P18848 AC007751.1-201ENST00000529260 376 ntBASIC2.37□□□□□ -2.03
ATF4P18848 MIR3129-201ENST00000581095 76 ntBASIC2.37□□□□□ -2.03
ATF4P18848 AL627230.6-201ENST00000611129 280 ntBASIC2.37□□□□□ -2.03
ATF4P18848 MIR8074-201ENST00000615081 81 ntBASIC2.37□□□□□ -2.03
ATF4P18848 Y_RNA.547-201ENST00000384654 119 ntBASIC2.36□□□□□ -2.03
ATF4P18848 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
ATF4P18848 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
ATF4P18848 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.36□□□□□ -2.03
ATF4P18848 AL392103.1-201ENST00000447000 198 ntBASIC2.36□□□□□ -2.03
ATF4P18848 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.36□□□□□ -2.03
ATF4P18848 SNORA44.1-201ENST00000517031 108 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms