Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 RNU6-1046P-201ENST00000516538 107 ntBASIC1.18□□□□□ -2.22
ERCC2P18074 AC136932.1-201ENST00000574771 208 ntBASIC1.18□□□□□ -2.22
ERCC2P18074 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.17□□□□□ -2.22
ERCC2P18074 Y_RNA.286-201ENST00000364813 102 ntBASIC1.17□□□□□ -2.22
ERCC2P18074 Y_RNA.368-201ENST00000365547 113 ntBASIC1.17□□□□□ -2.22
ERCC2P18074 Y_RNA.456-201ENST00000384232 111 ntBASIC1.17□□□□□ -2.22
ERCC2P18074 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.17□□□□□ -2.22
ERCC2P18074 MIR1298-201ENST00000408783 112 ntBASIC1.17□□□□□ -2.22
ERCC2P18074 AL591704.2-201ENST00000421658 181 ntBASIC1.17□□□□□ -2.22
ERCC2P18074 AC024067.1-201ENST00000426199 223 ntBASIC1.17□□□□□ -2.22
ERCC2P18074 LINC01399-202ENST00000458450 244 ntBASIC1.17□□□□□ -2.22
ERCC2P18074 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.17□□□□□ -2.22
ERCC2P18074 AC104695.3-201ENST00000604052 296 ntBASIC1.17□□□□□ -2.22
ERCC2P18074 MIR6078-201ENST00000611069 100 ntBASIC1.17□□□□□ -2.22
ERCC2P18074 Y_RNA.138-201ENST00000363462 102 ntBASIC1.16□□□□□ -2.22
ERCC2P18074 Y_RNA.336-201ENST00000365307 109 ntBASIC1.16□□□□□ -2.22
ERCC2P18074 Y_RNA.383-201ENST00000383855 97 ntBASIC1.16□□□□□ -2.22
ERCC2P18074 MIR452-201ENST00000385020 85 ntBASIC1.16□□□□□ -2.22
ERCC2P18074 RNU6-823P-201ENST00000391042 103 ntBASIC1.16□□□□□ -2.22
ERCC2P18074 HMGN1P7-201ENST00000491722 313 ntBASIC1.16□□□□□ -2.22
ERCC2P18074 SEPT14P8-201ENST00000508026 178 ntBASIC1.16□□□□□ -2.22
ERCC2P18074 SNORD116-28-201ENST00000516123 91 ntBASIC1.16□□□□□ -2.22
ERCC2P18074 Y_RNA.715-201ENST00000517082 110 ntBASIC1.16□□□□□ -2.22
ERCC2P18074 RNU6-988P-201ENST00000519081 107 ntBASIC1.16□□□□□ -2.22
ERCC2P18074 SNORD113-5-201ENST00000607261 78 ntBASIC1.16□□□□□ -2.22
ERCC2P18074 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
ERCC2P18074 RNU6-1084P-201ENST00000362498 107 ntBASIC1.15□□□□□ -2.23
ERCC2P18074 Y_RNA.128-201ENST00000363391 112 ntBASIC1.15□□□□□ -2.23
ERCC2P18074 Y_RNA.363-201ENST00000365529 113 ntBASIC1.15□□□□□ -2.23
ERCC2P18074 SNORA63.7-201ENST00000365579 123 ntBASIC1.15□□□□□ -2.23
ERCC2P18074 Y_RNA.389-201ENST00000383924 113 ntBASIC1.15□□□□□ -2.23
ERCC2P18074 RNU6-1323P-201ENST00000384025 107 ntBASIC1.15□□□□□ -2.23
ERCC2P18074 POLR2KP2-201ENST00000438155 177 ntBASIC1.15□□□□□ -2.23
ERCC2P18074 HMGN1P10-201ENST00000474557 553 ntBASIC1.15□□□□□ -2.23
ERCC2P18074 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.15□□□□□ -2.23
ERCC2P18074 SNORD45.4-201ENST00000516629 73 ntBASIC1.15□□□□□ -2.23
ERCC2P18074 MIR4300-201ENST00000581016 96 ntBASIC1.15□□□□□ -2.23
ERCC2P18074 POLR3GP1-201ENST00000594073 261 ntBASIC1.15□□□□□ -2.23
ERCC2P18074 RAC1P9-201ENST00000604990 392 ntBASIC1.15□□□□□ -2.23
ERCC2P18074 AL096861.1-201ENST00000610899 123 ntBASIC1.15□□□□□ -2.23
ERCC2P18074 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.15□□□□□ -2.23
ERCC2P18074 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
ERCC2P18074 RNU6-797P-201ENST00000363101 109 ntBASIC1.14□□□□□ -2.23
ERCC2P18074 SNORA22B-201ENST00000383876 138 ntBASIC1.14□□□□□ -2.23
ERCC2P18074 MIR516B2-201ENST00000385190 85 ntBASIC1.14□□□□□ -2.23
ERCC2P18074 RNU6-101P-201ENST00000410323 104 ntBASIC1.14□□□□□ -2.23
ERCC2P18074 MTCO2P12-201ENST00000427426 682 ntBASIC1.14□□□□□ -2.23
ERCC2P18074 U8.19-201ENST00000459095 133 ntBASIC1.14□□□□□ -2.23
ERCC2P18074 AC117454.1-201ENST00000491120 168 ntBASIC1.14□□□□□ -2.23
ERCC2P18074 SNORD111.1-201ENST00000516421 86 ntBASIC1.14□□□□□ -2.23
ERCC2P18074 RNU7-116P-201ENST00000516940 62 ntBASIC1.14□□□□□ -2.23
ERCC2P18074 RNU6-897P-201ENST00000517135 105 ntBASIC1.14□□□□□ -2.23
ERCC2P18074 AC024405.2-202ENST00000532731 184 ntBASIC1.14□□□□□ -2.23
ERCC2P18074 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
ERCC2P18074 MIR376A1-201ENST00000616574 68 ntBASIC1.14□□□□□ -2.23
ERCC2P18074 AC134503.1-201ENST00000633048 54 ntBASIC1.14□□□□□ -2.23
ERCC2P18074 Y_RNA.4-201ENST00000362333 112 ntBASIC1.13□□□□□ -2.23
ERCC2P18074 RNU4-80P-201ENST00000363200 141 ntBASIC1.13□□□□□ -2.23
ERCC2P18074 SNORD113-8-201ENST00000363497 74 ntBASIC1.13□□□□□ -2.23
ERCC2P18074 RNU1-124P-201ENST00000363861 145 ntBASIC1.13□□□□□ -2.23
ERCC2P18074 Y_RNA.183-201ENST00000363882 113 ntBASIC1.13□□□□□ -2.23
ERCC2P18074 RNU6-392P-201ENST00000364926 101 ntBASIC1.13□□□□□ -2.23
ERCC2P18074 U8.7-201ENST00000364940 136 ntBASIC1.13□□□□□ -2.23
ERCC2P18074 RNU6-53P-201ENST00000365367 106 ntBASIC1.13□□□□□ -2.23
ERCC2P18074 SNORA70.7-201ENST00000384159 133 ntBASIC1.13□□□□□ -2.23
ERCC2P18074 RNU6-131P-201ENST00000391144 107 ntBASIC1.13□□□□□ -2.23
ERCC2P18074 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
ERCC2P18074 MIR1252-201ENST00000408861 65 ntBASIC1.13□□□□□ -2.23
ERCC2P18074 Y_RNA.602-201ENST00000410535 92 ntBASIC1.13□□□□□ -2.23
ERCC2P18074 SNRPGP10-201ENST00000432323 225 ntBASIC1.13□□□□□ -2.23
ERCC2P18074 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
ERCC2P18074 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.13□□□□□ -2.23
ERCC2P18074 MIR4781-201ENST00000585250 76 ntBASIC1.13□□□□□ -2.23
ERCC2P18074 AP003357.1-201ENST00000604497 148 ntBASIC1.13□□□□□ -2.23
ERCC2P18074 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
ERCC2P18074 SNORD50B-201ENST00000364995 70 ntBASIC1.12□□□□□ -2.23
ERCC2P18074 RNU6-102P-201ENST00000384485 104 ntBASIC1.12□□□□□ -2.23
ERCC2P18074 MIR548P-201ENST00000408336 84 ntBASIC1.12□□□□□ -2.23
ERCC2P18074 RPS23P4-201ENST00000487908 423 ntBASIC1.12□□□□□ -2.23
ERCC2P18074 SNORD79.1-201ENST00000516069 84 ntBASIC1.12□□□□□ -2.23
ERCC2P18074 RNU7-115P-201ENST00000516433 55 ntBASIC1.12□□□□□ -2.23
ERCC2P18074 Y_RNA.711-201ENST00000516993 102 ntBASIC1.12□□□□□ -2.23
ERCC2P18074 Y_RNA.721-201ENST00000517207 102 ntBASIC1.12□□□□□ -2.23
ERCC2P18074 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
ERCC2P18074 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.11□□□□□ -2.23
ERCC2P18074 Y_RNA.164-201ENST00000363709 102 ntBASIC1.11□□□□□ -2.23
ERCC2P18074 snoU2-30.1-201ENST00000365012 70 ntBASIC1.11□□□□□ -2.23
ERCC2P18074 AC117470.1-201ENST00000381974 330 ntBASIC1.11□□□□□ -2.23
ERCC2P18074 SNORD115-46-201ENST00000390982 71 ntBASIC1.11□□□□□ -2.23
ERCC2P18074 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.11□□□□□ -2.23
ERCC2P18074 snoU13.25-201ENST00000458945 104 ntBASIC1.11□□□□□ -2.23
ERCC2P18074 RPL23AP54-201ENST00000495129 419 ntBASIC1.11□□□□□ -2.23
ERCC2P18074 AC090142.3-201ENST00000519012 385 ntBASIC1.11□□□□□ -2.23
ERCC2P18074 AC127455.1-201ENST00000565496 145 ntBASIC1.11□□□□□ -2.23
ERCC2P18074 MIR3192-201ENST00000584920 77 ntBASIC1.11□□□□□ -2.23
ERCC2P18074 MIR548AY-201ENST00000617669 107 ntBASIC1.11□□□□□ -2.23
ERCC2P18074 AC091895.1-201ENST00000624494 256 ntBASIC1.11□□□□□ -2.23
ERCC2P18074 RNU6-1048P-201ENST00000364054 107 ntBASIC1.1□□□□□ -2.23
ERCC2P18074 Y_RNA.203-201ENST00000364106 102 ntBASIC1.1□□□□□ -2.23
ERCC2P18074 Y_RNA.216-201ENST00000364205 93 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms