Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 U8.16-201ENST00000391279 133 ntBASIC4.31□□□□□ -1.72
CD44P16070 RN7SL93P-201ENST00000463035 293 ntBASIC4.31□□□□□ -1.72
CD44P16070 TRBV12-2-201ENST00000489763 344 ntBASIC4.31□□□□□ -1.72
CD44P16070 AC020914.4-201ENST00000597690 277 ntBASIC4.31□□□□□ -1.72
CD44P16070 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CD44P16070 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.3□□□□□ -1.72
CD44P16070 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CD44P16070 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD44P16070 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CD44P16070 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD44P16070 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
CD44P16070 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CD44P16070 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CD44P16070 RNU1-18P-201ENST00000363062 164 ntBASIC4.3□□□□□ -1.72
CD44P16070 RNU6-1187P-201ENST00000364771 110 ntBASIC4.3□□□□□ -1.72
CD44P16070 RNU6-1237P-201ENST00000384777 107 ntBASIC4.3□□□□□ -1.72
CD44P16070 RNA5SP208-201ENST00000516156 78 ntBASIC4.3□□□□□ -1.72
CD44P16070 SCARNA17.1-201ENST00000516211 143 ntBASIC4.3□□□□□ -1.72
CD44P16070 SCARNA17.2-201ENST00000516334 143 ntBASIC4.3□□□□□ -1.72
CD44P16070 RNU6-1057P-201ENST00000517162 102 ntBASIC4.3□□□□□ -1.72
CD44P16070 MRPL49P2-201ENST00000521066 465 ntBASIC4.3□□□□□ -1.72
CD44P16070 SCARNA17.4-201ENST00000614296 143 ntBASIC4.3□□□□□ -1.72
CD44P16070 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CD44P16070 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CD44P16070 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CD44P16070 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
CD44P16070 RNU6-369P-201ENST00000362515 102 ntBASIC4.29□□□□□ -1.72
CD44P16070 RNU6-446P-201ENST00000362827 106 ntBASIC4.29□□□□□ -1.72
CD44P16070 Y_RNA.207-201ENST00000364142 106 ntBASIC4.29□□□□□ -1.72
CD44P16070 RNA5SP252-201ENST00000391131 119 ntBASIC4.29□□□□□ -1.72
CD44P16070 RNU6-466P-201ENST00000391224 103 ntBASIC4.29□□□□□ -1.72
CD44P16070 LINC00901.1-201ENST00000617252 152 ntBASIC4.29□□□□□ -1.72
CD44P16070 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CD44P16070 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
CD44P16070 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.29□□□□□ -1.72
CD44P16070 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CD44P16070 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CD44P16070 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CD44P16070 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC4.28□□□□□ -1.72
CD44P16070 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CD44P16070 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CD44P16070 MIR95-201ENST00000385072 81 ntBASIC4.28□□□□□ -1.72
CD44P16070 RNU6-1254P-201ENST00000391266 104 ntBASIC4.28□□□□□ -1.72
CD44P16070 RNA5SP38-201ENST00000410750 119 ntBASIC4.28□□□□□ -1.72
CD44P16070 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.28□□□□□ -1.72
CD44P16070 SNORD123-201ENST00000459473 70 ntBASIC4.28□□□□□ -1.72
CD44P16070 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.28□□□□□ -1.72
CD44P16070 SNORA31.9-201ENST00000516429 84 ntBASIC4.28□□□□□ -1.72
CD44P16070 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.28□□□□□ -1.72
CD44P16070 AP000648.3-201ENST00000623539 4507 ntBASIC4.27□□□□□ -1.73
CD44P16070 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD44P16070 RNA5SP167-201ENST00000365461 116 ntBASIC4.27□□□□□ -1.73
CD44P16070 RNU6-1051P-201ENST00000365471 102 ntBASIC4.27□□□□□ -1.73
CD44P16070 MIR199A2-201ENST00000385289 110 ntBASIC4.27□□□□□ -1.73
CD44P16070 RNU6-243P-201ENST00000391140 107 ntBASIC4.27□□□□□ -1.73
CD44P16070 Y_RNA.606-201ENST00000410579 103 ntBASIC4.27□□□□□ -1.73
CD44P16070 SNORA71B-202ENST00000439232 272 ntBASIC4.27□□□□□ -1.73
CD44P16070 HMGN2P16-201ENST00000456802 261 ntBASIC4.27□□□□□ -1.73
CD44P16070 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC4.27□□□□□ -1.73
CD44P16070 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.27□□□□□ -1.73
CD44P16070 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD44P16070 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.26□□□□□ -1.73
CD44P16070 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CD44P16070 BX276092.1-201ENST00000427368 251 ntBASIC4.26□□□□□ -1.73
CD44P16070 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.26□□□□□ -1.73
CD44P16070 AC141846.1-201ENST00000568348 142 ntBASIC4.26□□□□□ -1.73
CD44P16070 MIR4284-201ENST00000578924 81 ntBASIC4.26□□□□□ -1.73
CD44P16070 RPL12P50-201ENST00000603116 116 ntBASIC4.26□□□□□ -1.73
CD44P16070 MIR5739-201ENST00000619803 80 ntBASIC4.26□□□□□ -1.73
CD44P16070 MIR492-201ENST00000638676 116 ntBASIC4.26□□□□□ -1.73
CD44P16070 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.26□□□□□ -1.73
CD44P16070 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CD44P16070 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CD44P16070 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CD44P16070 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CD44P16070 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CD44P16070 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CD44P16070 WWP1P1-201ENST00000466609 2769 ntBASIC4.25□□□□□ -1.73
CD44P16070 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CD44P16070 RNU1-105P-201ENST00000363470 161 ntBASIC4.25□□□□□ -1.73
CD44P16070 MIR516A2-201ENST00000384888 90 ntBASIC4.25□□□□□ -1.73
CD44P16070 MIR516A1-201ENST00000385033 90 ntBASIC4.25□□□□□ -1.73
CD44P16070 CYCSP35-201ENST00000451978 304 ntBASIC4.25□□□□□ -1.73
CD44P16070 RN7SKP132-201ENST00000516001 208 ntBASIC4.25□□□□□ -1.73
CD44P16070 RNU7-12P-201ENST00000516030 62 ntBASIC4.25□□□□□ -1.73
CD44P16070 SNORA31.10-201ENST00000516482 106 ntBASIC4.25□□□□□ -1.73
CD44P16070 AC138749.4-201ENST00000563970 127 ntBASIC4.25□□□□□ -1.73
CD44P16070 MIR6758-201ENST00000620653 63 ntBASIC4.25□□□□□ -1.73
CD44P16070 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.25□□□□□ -1.73
CD44P16070 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CD44P16070 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CD44P16070 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CD44P16070 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
CD44P16070 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CD44P16070 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CD44P16070 RNU6-604P-201ENST00000390917 100 ntBASIC4.24□□□□□ -1.73
CD44P16070 RNA5SP317-201ENST00000410176 116 ntBASIC4.24□□□□□ -1.73
CD44P16070 RNA5SP311-201ENST00000411290 116 ntBASIC4.24□□□□□ -1.73
CD44P16070 ATP5A1P2-201ENST00000412323 255 ntBASIC4.24□□□□□ -1.73
CD44P16070 AC006463.2-201ENST00000473326 348 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms