Protein–RNA interactions for Protein: P12109

COL6A1, Collagen alpha-1(VI) chain, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1P12109 AL590004.2-201ENST00000404787 371 ntBASIC2.7□□□□□ -1.98
COL6A1P12109 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.7□□□□□ -1.98
COL6A1P12109 AC245047.4-201ENST00000433189 144 ntBASIC2.7□□□□□ -1.98
COL6A1P12109 AC245102.2-201ENST00000448956 180 ntBASIC2.7□□□□□ -1.98
COL6A1P12109 AC097462.1-201ENST00000514125 324 ntBASIC2.7□□□□□ -1.98
COL6A1P12109 RNU6-1299P-201ENST00000516316 100 ntBASIC2.7□□□□□ -1.98
COL6A1P12109 RNU6-197P-201ENST00000516680 100 ntBASIC2.7□□□□□ -1.98
COL6A1P12109 RNU6-826P-201ENST00000516827 104 ntBASIC2.7□□□□□ -1.98
COL6A1P12109 RNU7-172P-201ENST00000517125 64 ntBASIC2.7□□□□□ -1.98
COL6A1P12109 U7.2-201ENST00000607576 63 ntBASIC2.7□□□□□ -1.98
COL6A1P12109 AL021707.8-201ENST00000609428 183 ntBASIC2.7□□□□□ -1.98
COL6A1P12109 MIR6895-201ENST00000613497 78 ntBASIC2.7□□□□□ -1.98
COL6A1P12109 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
COL6A1P12109 Y_RNA.203-201ENST00000364106 102 ntBASIC2.69□□□□□ -1.98
COL6A1P12109 RNU6-136P-201ENST00000384663 107 ntBASIC2.69□□□□□ -1.98
COL6A1P12109 RNU6-460P-201ENST00000391158 108 ntBASIC2.69□□□□□ -1.98
COL6A1P12109 AC123900.1-201ENST00000420390 96 ntBASIC2.69□□□□□ -1.98
COL6A1P12109 RNU2-56P-201ENST00000516826 190 ntBASIC2.69□□□□□ -1.98
COL6A1P12109 RNA5SP137-201ENST00000516833 135 ntBASIC2.69□□□□□ -1.98
COL6A1P12109 RNU6-667P-201ENST00000517186 102 ntBASIC2.69□□□□□ -1.98
COL6A1P12109 AL160236.1-201ENST00000556317 195 ntBASIC2.69□□□□□ -1.98
COL6A1P12109 AL049861.1-201ENST00000603130 150 ntBASIC2.69□□□□□ -1.98
COL6A1P12109 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.68□□□□□ -1.98
COL6A1P12109 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL6A1P12109 SNORA25.7-201ENST00000364375 127 ntBASIC2.68□□□□□ -1.98
COL6A1P12109 Y_RNA.353-201ENST00000365440 108 ntBASIC2.68□□□□□ -1.98
COL6A1P12109 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.68□□□□□ -1.98
COL6A1P12109 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
COL6A1P12109 RNU11-5P-201ENST00000391216 129 ntBASIC2.68□□□□□ -1.98
COL6A1P12109 MTCO1P44-201ENST00000441935 243 ntBASIC2.68□□□□□ -1.98
COL6A1P12109 AC093259.1-201ENST00000509755 300 ntBASIC2.68□□□□□ -1.98
COL6A1P12109 RNU4-57P-201ENST00000515980 135 ntBASIC2.68□□□□□ -1.98
COL6A1P12109 RNU6-1146P-201ENST00000516282 102 ntBASIC2.68□□□□□ -1.98
COL6A1P12109 RNU6-1234P-201ENST00000516877 103 ntBASIC2.68□□□□□ -1.98
COL6A1P12109 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.68□□□□□ -1.98
COL6A1P12109 AC120024.3-201ENST00000603167 156 ntBASIC2.68□□□□□ -1.98
COL6A1P12109 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.68□□□□□ -1.98
COL6A1P12109 MIR1291-201ENST00000627649 87 ntBASIC2.68□□□□□ -1.98
COL6A1P12109 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.68□□□□□ -1.98
COL6A1P12109 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
COL6A1P12109 AC007336.1-201ENST00000576365 3828 ntBASIC2.67□□□□□ -1.98
COL6A1P12109 Y_RNA.332-201ENST00000365271 113 ntBASIC2.67□□□□□ -1.98
COL6A1P12109 Y_RNA.584-201ENST00000391090 114 ntBASIC2.67□□□□□ -1.98
COL6A1P12109 SNORA26-201ENST00000391286 122 ntBASIC2.67□□□□□ -1.98
COL6A1P12109 RNU6-126P-201ENST00000516685 103 ntBASIC2.67□□□□□ -1.98
COL6A1P12109 RNU6-856P-201ENST00000516959 98 ntBASIC2.67□□□□□ -1.98
COL6A1P12109 PRELID2P1-201ENST00000552837 301 ntBASIC2.67□□□□□ -1.98
COL6A1P12109 RPL23AP91-201ENST00000569211 455 ntBASIC2.67□□□□□ -1.98
COL6A1P12109 AL929325.1-201ENST00000603096 117 ntBASIC2.67□□□□□ -1.98
COL6A1P12109 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
COL6A1P12109 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
COL6A1P12109 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
COL6A1P12109 RNU6-915P-201ENST00000364943 103 ntBASIC2.66□□□□□ -1.98
COL6A1P12109 RNU6-484P-201ENST00000384016 107 ntBASIC2.66□□□□□ -1.98
COL6A1P12109 RNU2-70P-201ENST00000410718 179 ntBASIC2.66□□□□□ -1.98
COL6A1P12109 RPS4XP11-201ENST00000446897 772 ntBASIC2.66□□□□□ -1.98
COL6A1P12109 RN7SKP179-201ENST00000516126 217 ntBASIC2.66□□□□□ -1.98
COL6A1P12109 RNA5SP153-201ENST00000516498 76 ntBASIC2.66□□□□□ -1.98
COL6A1P12109 AC121758.2-201ENST00000553271 193 ntBASIC2.66□□□□□ -1.98
COL6A1P12109 Y_RNA.757-201ENST00000578934 114 ntBASIC2.66□□□□□ -1.98
COL6A1P12109 MIR4287-201ENST00000579398 78 ntBASIC2.66□□□□□ -1.98
COL6A1P12109 uc_338.4-201ENST00000616635 176 ntBASIC2.66□□□□□ -1.98
COL6A1P12109 RNU6-834P-201ENST00000362367 110 ntBASIC2.65□□□□□ -1.99
COL6A1P12109 Y_RNA.251-201ENST00000364551 99 ntBASIC2.65□□□□□ -1.99
COL6A1P12109 SNORD20-201ENST00000384550 80 ntBASIC2.65□□□□□ -1.99
COL6A1P12109 MIR520G-201ENST00000385064 90 ntBASIC2.65□□□□□ -1.99
COL6A1P12109 AC026436.1-201ENST00000510537 270 ntBASIC2.65□□□□□ -1.99
COL6A1P12109 SNORD77.4-201ENST00000516158 81 ntBASIC2.65□□□□□ -1.99
COL6A1P12109 Y_RNA.686-201ENST00000516548 134 ntBASIC2.65□□□□□ -1.99
COL6A1P12109 SNORA31.25-201ENST00000517242 134 ntBASIC2.65□□□□□ -1.99
COL6A1P12109 NDUFA5P6-201ENST00000542110 379 ntBASIC2.65□□□□□ -1.99
COL6A1P12109 AC011604.1-201ENST00000545978 196 ntBASIC2.65□□□□□ -1.99
COL6A1P12109 U6.73-201ENST00000619194 103 ntBASIC2.65□□□□□ -1.99
COL6A1P12109 MIR7111-201ENST00000619751 72 ntBASIC2.65□□□□□ -1.99
COL6A1P12109 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
COL6A1P12109 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL6A1P12109 SNORD115-3-201ENST00000363100 82 ntBASIC2.64□□□□□ -1.99
COL6A1P12109 RNU6-1082P-201ENST00000364574 107 ntBASIC2.64□□□□□ -1.99
COL6A1P12109 Y_RNA.338-201ENST00000365320 114 ntBASIC2.64□□□□□ -1.99
COL6A1P12109 HMGN2P34-201ENST00000437647 269 ntBASIC2.64□□□□□ -1.99
COL6A1P12109 RPL23AP42-201ENST00000471152 471 ntBASIC2.64□□□□□ -1.99
COL6A1P12109 IGLV3-17-201ENST00000519099 244 ntBASIC2.64□□□□□ -1.99
COL6A1P12109 MIR4662B-201ENST00000579498 81 ntBASIC2.64□□□□□ -1.99
COL6A1P12109 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.64□□□□□ -1.99
COL6A1P12109 JPX_2.1-201ENST00000614161 69 ntBASIC2.64□□□□□ -1.99
COL6A1P12109 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.64□□□□□ -1.99
COL6A1P12109 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL6A1P12109 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
COL6A1P12109 Y_RNA.164-201ENST00000363709 102 ntBASIC2.63□□□□□ -1.99
COL6A1P12109 RNU6-978P-201ENST00000364371 103 ntBASIC2.63□□□□□ -1.99
COL6A1P12109 RNU6-215P-201ENST00000365169 102 ntBASIC2.63□□□□□ -1.99
COL6A1P12109 RPS15AP28-201ENST00000435088 386 ntBASIC2.63□□□□□ -1.99
COL6A1P12109 RN7SL297P-201ENST00000483161 293 ntBASIC2.63□□□□□ -1.99
COL6A1P12109 RNU2-19P-201ENST00000517288 84 ntBASIC2.63□□□□□ -1.99
COL6A1P12109 AC090049.2-201ENST00000550377 109 ntBASIC2.63□□□□□ -1.99
COL6A1P12109 AC022202.1-201ENST00000613515 211 ntBASIC2.63□□□□□ -1.99
COL6A1P12109 U2.20-201ENST00000613956 192 ntBASIC2.63□□□□□ -1.99
COL6A1P12109 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.63□□□□□ -1.99
COL6A1P12109 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.63□□□□□ -1.99
COL6A1P12109 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms