Protein–RNA interactions for Protein: P11473

VDR, Vitamin D3 receptor, humanhuman

Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VDRP11473 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.2□□□□□ -2.22
VDRP11473 AC091178.2-201ENST00000584401 117 ntBASIC1.2□□□□□ -2.22
VDRP11473 AC136443.5-201ENST00000603741 370 ntBASIC1.2□□□□□ -2.22
VDRP11473 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
VDRP11473 SNORA27.1-201ENST00000362604 124 ntBASIC1.19□□□□□ -2.22
VDRP11473 Y_RNA.64-201ENST00000362845 102 ntBASIC1.19□□□□□ -2.22
VDRP11473 RNU6-407P-201ENST00000365280 104 ntBASIC1.19□□□□□ -2.22
VDRP11473 Y_RNA.418-201ENST00000384029 102 ntBASIC1.19□□□□□ -2.22
VDRP11473 RNU6-926P-201ENST00000384075 107 ntBASIC1.19□□□□□ -2.22
VDRP11473 RNU6-1310P-201ENST00000384153 107 ntBASIC1.19□□□□□ -2.22
VDRP11473 Y_RNA.471-201ENST00000384312 102 ntBASIC1.19□□□□□ -2.22
VDRP11473 RNU6-910P-201ENST00000390844 107 ntBASIC1.19□□□□□ -2.22
VDRP11473 Y_RNA.581-201ENST00000391017 97 ntBASIC1.19□□□□□ -2.22
VDRP11473 AL590004.1-201ENST00000405321 300 ntBASIC1.19□□□□□ -2.22
VDRP11473 RNU5A-5P-201ENST00000411054 116 ntBASIC1.19□□□□□ -2.22
VDRP11473 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.19□□□□□ -2.22
VDRP11473 MTND2P23-201ENST00000422990 651 ntBASIC1.19□□□□□ -2.22
VDRP11473 SUMO1P2-201ENST00000452524 304 ntBASIC1.19□□□□□ -2.22
VDRP11473 AC005840.1-201ENST00000498412 377 ntBASIC1.19□□□□□ -2.22
VDRP11473 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.19□□□□□ -2.22
VDRP11473 AC010598.1-201ENST00000510378 103 ntBASIC1.19□□□□□ -2.22
VDRP11473 RNU6-322P-201ENST00000516010 103 ntBASIC1.19□□□□□ -2.22
VDRP11473 Y_RNA.122-201ENST00000363331 96 ntBASIC1.18□□□□□ -2.22
VDRP11473 Y_RNA.124-201ENST00000363339 93 ntBASIC1.18□□□□□ -2.22
VDRP11473 Y_RNA.136-201ENST00000363444 102 ntBASIC1.18□□□□□ -2.22
VDRP11473 Y_RNA.143-201ENST00000363520 106 ntBASIC1.18□□□□□ -2.22
VDRP11473 Y_RNA.224-201ENST00000364308 111 ntBASIC1.18□□□□□ -2.22
VDRP11473 RNU6-392P-201ENST00000364926 101 ntBASIC1.18□□□□□ -2.22
VDRP11473 MT-TW-201ENST00000387382 68 ntBASIC1.18□□□□□ -2.22
VDRP11473 RPL21P38-201ENST00000418090 167 ntBASIC1.18□□□□□ -2.22
VDRP11473 AL731563.1-201ENST00000442202 214 ntBASIC1.18□□□□□ -2.22
VDRP11473 STAG3L5P-204ENST00000443759 179 ntBASIC1.18□□□□□ -2.22
VDRP11473 MTND5P22-201ENST00000458380 195 ntBASIC1.18□□□□□ -2.22
VDRP11473 HMGN1P10-201ENST00000474557 553 ntBASIC1.18□□□□□ -2.22
VDRP11473 AC131281.1-201ENST00000522984 164 ntBASIC1.18□□□□□ -2.22
VDRP11473 AP001282.2-201ENST00000616149 309 ntBASIC1.18□□□□□ -2.22
VDRP11473 AC018630.2-201ENST00000534866 2403 ntBASIC1.17□□□□□ -2.22
VDRP11473 RNU6-199P-201ENST00000362954 107 ntBASIC1.17□□□□□ -2.22
VDRP11473 Y_RNA.84-201ENST00000363011 104 ntBASIC1.17□□□□□ -2.22
VDRP11473 Y_RNA.310-201ENST00000365063 113 ntBASIC1.17□□□□□ -2.22
VDRP11473 SNORA25.9-201ENST00000365087 128 ntBASIC1.17□□□□□ -2.22
VDRP11473 RNU6-1175P-201ENST00000365200 107 ntBASIC1.17□□□□□ -2.22
VDRP11473 RNU6-53P-201ENST00000365367 106 ntBASIC1.17□□□□□ -2.22
VDRP11473 Y_RNA.389-201ENST00000383924 113 ntBASIC1.17□□□□□ -2.22
VDRP11473 Y_RNA.439-201ENST00000384119 94 ntBASIC1.17□□□□□ -2.22
VDRP11473 Y_RNA.508-201ENST00000384502 114 ntBASIC1.17□□□□□ -2.22
VDRP11473 Y_RNA.512-201ENST00000384518 102 ntBASIC1.17□□□□□ -2.22
VDRP11473 Y_RNA.526-201ENST00000384572 110 ntBASIC1.17□□□□□ -2.22
VDRP11473 Y_RNA.541-201ENST00000384640 113 ntBASIC1.17□□□□□ -2.22
VDRP11473 SNORD58.1-201ENST00000391313 66 ntBASIC1.17□□□□□ -2.22
VDRP11473 RNA5SP475-201ENST00000410568 110 ntBASIC1.17□□□□□ -2.22
VDRP11473 AC063976.4-201ENST00000421971 163 ntBASIC1.17□□□□□ -2.22
VDRP11473 MRPS10P1-201ENST00000448483 130 ntBASIC1.17□□□□□ -2.22
VDRP11473 RPL39P39-201ENST00000455840 151 ntBASIC1.17□□□□□ -2.22
VDRP11473 MTATP8P1-201ENST00000467115 207 ntBASIC1.17□□□□□ -2.22
VDRP11473 MTND1P19-201ENST00000511780 315 ntBASIC1.17□□□□□ -2.22
VDRP11473 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.17□□□□□ -2.22
VDRP11473 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.17□□□□□ -2.22
VDRP11473 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.17□□□□□ -2.22
VDRP11473 SNORA63-201ENST00000363450 132 ntBASIC1.16□□□□□ -2.22
VDRP11473 RNU6-801P-201ENST00000364087 105 ntBASIC1.16□□□□□ -2.22
VDRP11473 Y_RNA.210-201ENST00000364161 110 ntBASIC1.16□□□□□ -2.22
VDRP11473 Y_RNA.267-201ENST00000364679 109 ntBASIC1.16□□□□□ -2.22
VDRP11473 AL451046.2-201ENST00000403074 277 ntBASIC1.16□□□□□ -2.22
VDRP11473 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.16□□□□□ -2.22
VDRP11473 POLR2J4-204ENST00000418424 324 ntBASIC1.16□□□□□ -2.22
VDRP11473 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.16□□□□□ -2.22
VDRP11473 MRPS35P2-201ENST00000508242 191 ntBASIC1.16□□□□□ -2.22
VDRP11473 RNU6-947P-201ENST00000516264 106 ntBASIC1.16□□□□□ -2.22
VDRP11473 RNU6-327P-201ENST00000516270 127 ntBASIC1.16□□□□□ -2.22
VDRP11473 RNU7-172P-201ENST00000517125 64 ntBASIC1.16□□□□□ -2.22
VDRP11473 MIR4778-201ENST00000577635 80 ntBASIC1.16□□□□□ -2.22
VDRP11473 MIR4295-201ENST00000585286 85 ntBASIC1.16□□□□□ -2.22
VDRP11473 AC005176.2-201ENST00000596933 147 ntBASIC1.16□□□□□ -2.22
VDRP11473 AC008737.2-201ENST00000599446 118 ntBASIC1.16□□□□□ -2.22
VDRP11473 Y_RNA.772-201ENST00000606692 102 ntBASIC1.16□□□□□ -2.22
VDRP11473 MIR8070-201ENST00000616510 88 ntBASIC1.16□□□□□ -2.22
VDRP11473 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
VDRP11473 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.15□□□□□ -2.22
VDRP11473 Y_RNA.19-201ENST00000362462 99 ntBASIC1.15□□□□□ -2.23
VDRP11473 Y_RNA.162-201ENST00000363683 102 ntBASIC1.15□□□□□ -2.23
VDRP11473 Y_RNA.376-201ENST00000365638 108 ntBASIC1.15□□□□□ -2.23
VDRP11473 Y_RNA.424-201ENST00000384063 103 ntBASIC1.15□□□□□ -2.23
VDRP11473 MIR19B1-201ENST00000384829 87 ntBASIC1.15□□□□□ -2.23
VDRP11473 SNORD12-201ENST00000391002 90 ntBASIC1.15□□□□□ -2.23
VDRP11473 MIR873-201ENST00000401120 77 ntBASIC1.15□□□□□ -2.23
VDRP11473 AL031003.1-201ENST00000404229 172 ntBASIC1.15□□□□□ -2.23
VDRP11473 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
VDRP11473 RNU6-1203P-201ENST00000410703 110 ntBASIC1.15□□□□□ -2.23
VDRP11473 MTCYBP9-201ENST00000431021 303 ntBASIC1.15□□□□□ -2.23
VDRP11473 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.15□□□□□ -2.23
VDRP11473 AC048334.1-201ENST00000477975 159 ntBASIC1.15□□□□□ -2.23
VDRP11473 MTCO2P24-201ENST00000515611 426 ntBASIC1.15□□□□□ -2.23
VDRP11473 Y_RNA.668-201ENST00000516233 93 ntBASIC1.15□□□□□ -2.23
VDRP11473 AC006504.6-201ENST00000590142 199 ntBASIC1.15□□□□□ -2.23
VDRP11473 RPS29P30-201ENST00000600975 111 ntBASIC1.15□□□□□ -2.23
VDRP11473 AL357312.1-201ENST00000603879 298 ntBASIC1.15□□□□□ -2.23
VDRP11473 AC011921.3-201ENST00000605540 361 ntBASIC1.15□□□□□ -2.23
VDRP11473 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.15□□□□□ -2.23
VDRP11473 MIR8062-201ENST00000621515 85 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms