Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 RN7SKP101-201ENST00000411376 320 ntBASIC2.48□□□□□ -2.01
ITGB1P05556 SRIP3-201ENST00000413200 219 ntBASIC2.48□□□□□ -2.01
ITGB1P05556 RPS15AP28-201ENST00000435088 386 ntBASIC2.48□□□□□ -2.01
ITGB1P05556 AL929325.1-201ENST00000603096 117 ntBASIC2.48□□□□□ -2.01
ITGB1P05556 AL049861.1-201ENST00000603130 150 ntBASIC2.48□□□□□ -2.01
ITGB1P05556 AC120024.3-201ENST00000603167 156 ntBASIC2.48□□□□□ -2.01
ITGB1P05556 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.48□□□□□ -2.01
ITGB1P05556 U2.20-201ENST00000613956 192 ntBASIC2.48□□□□□ -2.01
ITGB1P05556 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.48□□□□□ -2.01
ITGB1P05556 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
ITGB1P05556 RNU6-674P-201ENST00000363831 107 ntBASIC2.47□□□□□ -2.01
ITGB1P05556 Y_RNA.273-201ENST00000364703 102 ntBASIC2.47□□□□□ -2.01
ITGB1P05556 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.47□□□□□ -2.01
ITGB1P05556 SNORA6-201ENST00000384033 151 ntBASIC2.47□□□□□ -2.01
ITGB1P05556 RNU6-80P-201ENST00000384195 107 ntBASIC2.47□□□□□ -2.01
ITGB1P05556 Y_RNA.525-201ENST00000384570 113 ntBASIC2.47□□□□□ -2.01
ITGB1P05556 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.47□□□□□ -2.01
ITGB1P05556 SNORA4.4-201ENST00000515921 135 ntBASIC2.47□□□□□ -2.01
ITGB1P05556 RNU6-548P-201ENST00000517083 115 ntBASIC2.47□□□□□ -2.01
ITGB1P05556 AP001328.1-201ENST00000528550 176 ntBASIC2.47□□□□□ -2.01
ITGB1P05556 AC121758.2-201ENST00000553271 193 ntBASIC2.47□□□□□ -2.01
ITGB1P05556 MIR5007-201ENST00000583098 95 ntBASIC2.47□□□□□ -2.01
ITGB1P05556 AL021707.8-201ENST00000609428 183 ntBASIC2.47□□□□□ -2.01
ITGB1P05556 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
ITGB1P05556 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
ITGB1P05556 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
ITGB1P05556 Y_RNA.99-201ENST00000363138 105 ntBASIC2.46□□□□□ -2.02
ITGB1P05556 RNU1-22P-201ENST00000363334 158 ntBASIC2.46□□□□□ -2.02
ITGB1P05556 RNU6-44P-201ENST00000384045 107 ntBASIC2.46□□□□□ -2.02
ITGB1P05556 SNORA64-201ENST00000384674 134 ntBASIC2.46□□□□□ -2.02
ITGB1P05556 RNA5SP496-201ENST00000391240 109 ntBASIC2.46□□□□□ -2.02
ITGB1P05556 SNORA75.5-201ENST00000391291 81 ntBASIC2.46□□□□□ -2.02
ITGB1P05556 AC010154.1-201ENST00000425857 269 ntBASIC2.46□□□□□ -2.02
ITGB1P05556 AC097462.1-201ENST00000514125 324 ntBASIC2.46□□□□□ -2.02
ITGB1P05556 RNU4-57P-201ENST00000515980 135 ntBASIC2.46□□□□□ -2.02
ITGB1P05556 MIR378D2-201ENST00000580636 98 ntBASIC2.46□□□□□ -2.02
ITGB1P05556 AP001340.1-201ENST00000624405 217 ntBASIC2.46□□□□□ -2.02
ITGB1P05556 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.45□□□□□ -2.02
ITGB1P05556 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ITGB1P05556 Y_RNA.294-201ENST00000364916 102 ntBASIC2.45□□□□□ -2.02
ITGB1P05556 RNU6-915P-201ENST00000364943 103 ntBASIC2.45□□□□□ -2.02
ITGB1P05556 RNU6-484P-201ENST00000384016 107 ntBASIC2.45□□□□□ -2.02
ITGB1P05556 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
ITGB1P05556 AC060773.1-201ENST00000421698 310 ntBASIC2.45□□□□□ -2.02
ITGB1P05556 AL353689.1-201ENST00000438895 199 ntBASIC2.45□□□□□ -2.02
ITGB1P05556 AC009238.1-201ENST00000442165 424 ntBASIC2.45□□□□□ -2.02
ITGB1P05556 RPS4XP11-201ENST00000446897 772 ntBASIC2.45□□□□□ -2.02
ITGB1P05556 AC009237.6-201ENST00000446969 424 ntBASIC2.45□□□□□ -2.02
ITGB1P05556 RNU7-107P-201ENST00000459121 61 ntBASIC2.45□□□□□ -2.02
ITGB1P05556 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.45□□□□□ -2.02
ITGB1P05556 RNU6-597P-201ENST00000365620 102 ntBASIC2.44□□□□□ -2.02
ITGB1P05556 SNORA72-201ENST00000384339 132 ntBASIC2.44□□□□□ -2.02
ITGB1P05556 SNORA79-201ENST00000408376 140 ntBASIC2.44□□□□□ -2.02
ITGB1P05556 AL035461.1-201ENST00000421490 332 ntBASIC2.44□□□□□ -2.02
ITGB1P05556 HMGN2P23-201ENST00000456759 269 ntBASIC2.44□□□□□ -2.02
ITGB1P05556 RNU6-659P-201ENST00000516454 104 ntBASIC2.44□□□□□ -2.02
ITGB1P05556 RNU6-197P-201ENST00000516680 100 ntBASIC2.44□□□□□ -2.02
ITGB1P05556 MIR4438-201ENST00000585271 93 ntBASIC2.44□□□□□ -2.02
ITGB1P05556 AL391516.1-201ENST00000554380 2449 ntBASIC2.44□□□□□ -2.02
ITGB1P05556 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ITGB1P05556 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ITGB1P05556 MIR6073-201ENST00000352083 89 ntBASIC2.43□□□□□ -2.02
ITGB1P05556 RNU6-978P-201ENST00000364371 103 ntBASIC2.43□□□□□ -2.02
ITGB1P05556 RNU6-1325P-201ENST00000364905 105 ntBASIC2.43□□□□□ -2.02
ITGB1P05556 RNU1-51P-201ENST00000365345 176 ntBASIC2.43□□□□□ -2.02
ITGB1P05556 Y_RNA.432-201ENST00000384087 111 ntBASIC2.43□□□□□ -2.02
ITGB1P05556 SNORA67.3-201ENST00000384366 140 ntBASIC2.43□□□□□ -2.02
ITGB1P05556 MIR1262-201ENST00000408276 93 ntBASIC2.43□□□□□ -2.02
ITGB1P05556 RNA5SP181-201ENST00000410246 98 ntBASIC2.43□□□□□ -2.02
ITGB1P05556 HMGN2P34-201ENST00000437647 269 ntBASIC2.43□□□□□ -2.02
ITGB1P05556 RNU1-131P-201ENST00000458943 161 ntBASIC2.43□□□□□ -2.02
ITGB1P05556 RNU7-172P-201ENST00000517125 64 ntBASIC2.43□□□□□ -2.02
ITGB1P05556 AC090142.3-201ENST00000519012 385 ntBASIC2.43□□□□□ -2.02
ITGB1P05556 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.43□□□□□ -2.02
ITGB1P05556 RPL23AP91-201ENST00000569211 455 ntBASIC2.43□□□□□ -2.02
ITGB1P05556 SNORD14A-201ENST00000606526 91 ntBASIC2.43□□□□□ -2.02
ITGB1P05556 U7.2-201ENST00000607576 63 ntBASIC2.43□□□□□ -2.02
ITGB1P05556 AL353149.1-201ENST00000610667 244 ntBASIC2.43□□□□□ -2.02
ITGB1P05556 AL353997.5-201ENST00000618886 171 ntBASIC2.43□□□□□ -2.02
ITGB1P05556 U6.73-201ENST00000619194 103 ntBASIC2.43□□□□□ -2.02
ITGB1P05556 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
ITGB1P05556 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
ITGB1P05556 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
ITGB1P05556 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
ITGB1P05556 snoU2-30.2-201ENST00000362805 70 ntBASIC2.42□□□□□ -2.02
ITGB1P05556 Y_RNA.203-201ENST00000364106 102 ntBASIC2.42□□□□□ -2.02
ITGB1P05556 RNU6-1080P-201ENST00000383982 107 ntBASIC2.42□□□□□ -2.02
ITGB1P05556 MIR221-201ENST00000385135 110 ntBASIC2.42□□□□□ -2.02
ITGB1P05556 EDDM3CP-201ENST00000415977 425 ntBASIC2.42□□□□□ -2.02
ITGB1P05556 AC245102.2-201ENST00000448956 180 ntBASIC2.42□□□□□ -2.02
ITGB1P05556 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.42□□□□□ -2.02
ITGB1P05556 AC011406.1-201ENST00000512440 370 ntBASIC2.42□□□□□ -2.02
ITGB1P05556 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.42□□□□□ -2.02
ITGB1P05556 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ITGB1P05556 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
ITGB1P05556 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ITGB1P05556 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
ITGB1P05556 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ITGB1P05556 Y_RNA.91-201ENST00000363042 107 ntBASIC2.41□□□□□ -2.02
ITGB1P05556 SNORD114-6-201ENST00000364393 72 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 223.1 ms