Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.2□□□□□ -2.44
HLA-DQB2P05538 SEPT14P4-201ENST00000513445 186 ntBASIC-0.2□□□□□ -2.44
HLA-DQB2P05538 Y_RNA.693-201ENST00000516641 110 ntBASIC-0.2□□□□□ -2.44
HLA-DQB2P05538 FO082796.1-201ENST00000523795 183 ntBASIC-0.2□□□□□ -2.44
HLA-DQB2P05538 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.2□□□□□ -2.44
HLA-DQB2P05538 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.2□□□□□ -2.44
HLA-DQB2P05538 AC133485.4-201ENST00000561835 220 ntBASIC-0.2□□□□□ -2.44
HLA-DQB2P05538 MIR6863-201ENST00000636112 90 ntBASIC-0.2□□□□□ -2.44
HLA-DQB2P05538 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.21□□□□□ -2.44
HLA-DQB2P05538 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.21□□□□□ -2.44
HLA-DQB2P05538 RNA5SP117-201ENST00000365294 118 ntBASIC-0.21□□□□□ -2.44
HLA-DQB2P05538 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.21□□□□□ -2.44
HLA-DQB2P05538 RNU6-842P-201ENST00000384269 107 ntBASIC-0.21□□□□□ -2.44
HLA-DQB2P05538 PCNPP3-201ENST00000393579 471 ntBASIC-0.21□□□□□ -2.44
HLA-DQB2P05538 AL031003.1-201ENST00000404229 172 ntBASIC-0.21□□□□□ -2.44
HLA-DQB2P05538 RNU2-61P-201ENST00000411069 191 ntBASIC-0.21□□□□□ -2.44
HLA-DQB2P05538 AC091959.1-201ENST00000495857 238 ntBASIC-0.21□□□□□ -2.44
HLA-DQB2P05538 SNORA18.4-201ENST00000516440 124 ntBASIC-0.21□□□□□ -2.44
HLA-DQB2P05538 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.21□□□□□ -2.44
HLA-DQB2P05538 AC141557.1-201ENST00000540982 400 ntBASIC-0.21□□□□□ -2.44
HLA-DQB2P05538 DISC2.1-201ENST00000612827 205 ntBASIC-0.21□□□□□ -2.44
HLA-DQB2P05538 SNORA32.1-201ENST00000364514 115 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 RNU6-767P-201ENST00000384132 107 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 MIR643-201ENST00000385267 97 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 RNU6-747P-201ENST00000390928 104 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 RNU6-241P-201ENST00000391148 104 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 RNU6-447P-201ENST00000410293 104 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 RNU6-355P-201ENST00000410427 104 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 RNU6-791P-201ENST00000410467 104 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 RNU6-705P-201ENST00000410601 104 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 RNU6-860P-201ENST00000410860 104 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 RNU6-785P-201ENST00000411324 104 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 AC090844.1-201ENST00000422019 156 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 USP9YP30-201ENST00000430729 455 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 RNU6-273P-201ENST00000516937 96 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 AC105029.1-201ENST00000520250 669 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 AC087685.1-201ENST00000587507 141 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 DLEU2_1.1-201ENST00000612089 120 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 U6.90-201ENST00000614007 104 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 DLEU2_1.2-201ENST00000614667 120 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 AC004467.1-201ENST00000615678 330 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 MIR6755-201ENST00000619993 66 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 U6.70-201ENST00000620287 104 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 AC067863.3-201ENST00000624172 122 ntBASIC-0.22□□□□□ -2.44
HLA-DQB2P05538 AC010332.2-201ENST00000613083 1904 ntBASIC-0.23□□□□□ -2.45
HLA-DQB2P05538 MIR125B2-201ENST00000385128 89 ntBASIC-0.23□□□□□ -2.45
HLA-DQB2P05538 MIR610-201ENST00000385139 96 ntBASIC-0.23□□□□□ -2.45
HLA-DQB2P05538 MIR802-201ENST00000390235 94 ntBASIC-0.23□□□□□ -2.45
HLA-DQB2P05538 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.23□□□□□ -2.45
HLA-DQB2P05538 RPL17P19-201ENST00000489069 552 ntBASIC-0.23□□□□□ -2.45
HLA-DQB2P05538 RNU7-129P-201ENST00000516128 62 ntBASIC-0.23□□□□□ -2.45
HLA-DQB2P05538 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.23□□□□□ -2.45
HLA-DQB2P05538 AC055872.1-201ENST00000570978 278 ntBASIC-0.23□□□□□ -2.45
HLA-DQB2P05538 SNORD92-201ENST00000585078 85 ntBASIC-0.23□□□□□ -2.45
HLA-DQB2P05538 AC006380.1-201ENST00000603598 186 ntBASIC-0.23□□□□□ -2.45
HLA-DQB2P05538 MIR6779-201ENST00000617283 64 ntBASIC-0.23□□□□□ -2.45
HLA-DQB2P05538 RNA5SP325-201ENST00000363756 130 ntBASIC-0.24□□□□□ -2.45
HLA-DQB2P05538 U8.7-201ENST00000364940 136 ntBASIC-0.24□□□□□ -2.45
HLA-DQB2P05538 Y_RNA.359-201ENST00000365498 102 ntBASIC-0.24□□□□□ -2.45
HLA-DQB2P05538 RNU6-442P-201ENST00000383968 104 ntBASIC-0.24□□□□□ -2.45
HLA-DQB2P05538 MIR593-201ENST00000384856 100 ntBASIC-0.24□□□□□ -2.45
HLA-DQB2P05538 RNA5SP496-201ENST00000391240 109 ntBASIC-0.24□□□□□ -2.45
HLA-DQB2P05538 MTCO3P40-201ENST00000392516 676 ntBASIC-0.24□□□□□ -2.45
HLA-DQB2P05538 RNU6-908P-201ENST00000410160 94 ntBASIC-0.24□□□□□ -2.45
HLA-DQB2P05538 RNU6-855P-201ENST00000410395 104 ntBASIC-0.24□□□□□ -2.45
HLA-DQB2P05538 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.24□□□□□ -2.45
HLA-DQB2P05538 AC069271.1-201ENST00000445577 156 ntBASIC-0.24□□□□□ -2.45
HLA-DQB2P05538 MIR18B-201ENST00000454574 71 ntBASIC-0.24□□□□□ -2.45
HLA-DQB2P05538 RNU6-408P-201ENST00000515910 100 ntBASIC-0.24□□□□□ -2.45
HLA-DQB2P05538 AL512360.1-201ENST00000555346 234 ntBASIC-0.24□□□□□ -2.45
HLA-DQB2P05538 MIR3942-201ENST00000585264 109 ntBASIC-0.24□□□□□ -2.45
HLA-DQB2P05538 AC018638.8-201ENST00000588755 281 ntBASIC-0.24□□□□□ -2.45
HLA-DQB2P05538 AC119751.7-201ENST00000600494 245 ntBASIC-0.24□□□□□ -2.45
HLA-DQB2P05538 AC005014.2-201ENST00000607795 599 ntBASIC-0.24□□□□□ -2.45
HLA-DQB2P05538 AL359880.1-201ENST00000621879 266 ntBASIC-0.24□□□□□ -2.45
HLA-DQB2P05538 RNU6-324P-201ENST00000363957 106 ntBASIC-0.25□□□□□ -2.45
HLA-DQB2P05538 RNU6-268P-201ENST00000364174 107 ntBASIC-0.25□□□□□ -2.45
HLA-DQB2P05538 SNORA63C-201ENST00000364578 129 ntBASIC-0.25□□□□□ -2.45
HLA-DQB2P05538 SNORA1.2-201ENST00000365189 134 ntBASIC-0.25□□□□□ -2.45
HLA-DQB2P05538 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.25□□□□□ -2.45
HLA-DQB2P05538 MIR145-201ENST00000384967 88 ntBASIC-0.25□□□□□ -2.45
HLA-DQB2P05538 RNU6-127P-201ENST00000390897 107 ntBASIC-0.25□□□□□ -2.45
HLA-DQB2P05538 SNORD12B-201ENST00000410433 91 ntBASIC-0.25□□□□□ -2.45
HLA-DQB2P05538 RNU6-847P-201ENST00000411115 108 ntBASIC-0.25□□□□□ -2.45
HLA-DQB2P05538 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.25□□□□□ -2.45
HLA-DQB2P05538 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.25□□□□□ -2.45
HLA-DQB2P05538 SNORD5.1-201ENST00000458800 75 ntBASIC-0.25□□□□□ -2.45
HLA-DQB2P05538 AC011352.1-201ENST00000512300 793 ntBASIC-0.25□□□□□ -2.45
HLA-DQB2P05538 SCARNA8-201ENST00000515924 131 ntBASIC-0.25□□□□□ -2.45
HLA-DQB2P05538 RNU7-156P-201ENST00000517214 74 ntBASIC-0.25□□□□□ -2.45
HLA-DQB2P05538 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.25□□□□□ -2.45
HLA-DQB2P05538 AL162413.1-201ENST00000603198 110 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms