Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 Y_RNA.28-201ENST00000362554 111 ntBASIC0.99□□□□□ -2.25
MMP1P03956 Y_RNA.445-201ENST00000384168 102 ntBASIC0.99□□□□□ -2.25
MMP1P03956 Y_RNA.460-201ENST00000384255 102 ntBASIC0.99□□□□□ -2.25
MMP1P03956 RNU6-937P-201ENST00000384325 106 ntBASIC0.99□□□□□ -2.25
MMP1P03956 RNU6-424P-201ENST00000384367 105 ntBASIC0.99□□□□□ -2.25
MMP1P03956 RNY1P4-201ENST00000384595 115 ntBASIC0.99□□□□□ -2.25
MMP1P03956 MIR660-201ENST00000385235 97 ntBASIC0.99□□□□□ -2.25
MMP1P03956 RNU11-5P-201ENST00000391216 129 ntBASIC0.99□□□□□ -2.25
MMP1P03956 U8.16-201ENST00000391279 133 ntBASIC0.99□□□□□ -2.25
MMP1P03956 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.99□□□□□ -2.25
MMP1P03956 SNORD116-28-201ENST00000516123 91 ntBASIC0.99□□□□□ -2.25
MMP1P03956 RNU7-40P-201ENST00000516397 64 ntBASIC0.99□□□□□ -2.25
MMP1P03956 RNU6-165P-201ENST00000517170 99 ntBASIC0.99□□□□□ -2.25
MMP1P03956 AP002004.2-201ENST00000531656 154 ntBASIC0.99□□□□□ -2.25
MMP1P03956 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.99□□□□□ -2.25
MMP1P03956 AC136932.1-201ENST00000574771 208 ntBASIC0.99□□□□□ -2.25
MMP1P03956 RPS29P30-201ENST00000600975 111 ntBASIC0.99□□□□□ -2.25
MMP1P03956 AL162424.1-201ENST00000602325 221 ntBASIC0.99□□□□□ -2.25
MMP1P03956 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.99□□□□□ -2.25
MMP1P03956 AC090574.1-201ENST00000623186 233 ntBASIC0.99□□□□□ -2.25
MMP1P03956 AC068647.2-201ENST00000637380 353 ntBASIC0.99□□□□□ -2.25
MMP1P03956 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
MMP1P03956 Y_RNA.143-201ENST00000363520 106 ntBASIC0.98□□□□□ -2.25
MMP1P03956 RNU6-324P-201ENST00000363957 106 ntBASIC0.98□□□□□ -2.25
MMP1P03956 RNU4-41P-201ENST00000364426 143 ntBASIC0.98□□□□□ -2.25
MMP1P03956 SNORD14.1-201ENST00000365609 90 ntBASIC0.98□□□□□ -2.25
MMP1P03956 SNORD63-201ENST00000384262 68 ntBASIC0.98□□□□□ -2.25
MMP1P03956 Y_RNA.471-201ENST00000384312 102 ntBASIC0.98□□□□□ -2.25
MMP1P03956 SNORA25-201ENST00000384384 134 ntBASIC0.98□□□□□ -2.25
MMP1P03956 Y_RNA.551-201ENST00000384661 102 ntBASIC0.98□□□□□ -2.25
MMP1P03956 MIR520G-201ENST00000385064 90 ntBASIC0.98□□□□□ -2.25
MMP1P03956 RNU4-30P-201ENST00000410245 143 ntBASIC0.98□□□□□ -2.25
MMP1P03956 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.98□□□□□ -2.25
MMP1P03956 AC005042.3-201ENST00000453230 174 ntBASIC0.98□□□□□ -2.25
MMP1P03956 U8.20-201ENST00000459445 131 ntBASIC0.98□□□□□ -2.25
MMP1P03956 OR2A41P-201ENST00000473586 105 ntBASIC0.98□□□□□ -2.25
MMP1P03956 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.98□□□□□ -2.25
MMP1P03956 SNORA70.12-201ENST00000516084 153 ntBASIC0.98□□□□□ -2.25
MMP1P03956 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.98□□□□□ -2.25
MMP1P03956 MIR4778-201ENST00000577635 80 ntBASIC0.98□□□□□ -2.25
MMP1P03956 Y_RNA.772-201ENST00000606692 102 ntBASIC0.98□□□□□ -2.25
MMP1P03956 AC027335.2-201ENST00000624030 375 ntBASIC0.98□□□□□ -2.25
MMP1P03956 RNU1-124P-201ENST00000363861 145 ntBASIC0.97□□□□□ -2.25
MMP1P03956 Y_RNA.216-201ENST00000364205 93 ntBASIC0.97□□□□□ -2.25
MMP1P03956 RNU4-50P-201ENST00000364361 141 ntBASIC0.97□□□□□ -2.25
MMP1P03956 Y_RNA.265-201ENST00000364677 108 ntBASIC0.97□□□□□ -2.25
MMP1P03956 Y_RNA.286-201ENST00000364813 102 ntBASIC0.97□□□□□ -2.25
MMP1P03956 Y_RNA.331-201ENST00000365267 102 ntBASIC0.97□□□□□ -2.25
MMP1P03956 Y_RNA.439-201ENST00000384119 94 ntBASIC0.97□□□□□ -2.25
MMP1P03956 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
MMP1P03956 RNU6-823P-201ENST00000391042 103 ntBASIC0.97□□□□□ -2.25
MMP1P03956 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.97□□□□□ -2.25
MMP1P03956 RPS20P10-201ENST00000451209 253 ntBASIC0.97□□□□□ -2.25
MMP1P03956 AC233266.1-201ENST00000454518 96 ntBASIC0.97□□□□□ -2.25
MMP1P03956 Y_RNA.631-201ENST00000459607 101 ntBASIC0.97□□□□□ -2.25
MMP1P03956 AL049830.1-201ENST00000468034 425 ntBASIC0.97□□□□□ -2.25
MMP1P03956 RNU6-1046P-201ENST00000516538 107 ntBASIC0.97□□□□□ -2.25
MMP1P03956 RNU2-56P-201ENST00000516826 190 ntBASIC0.97□□□□□ -2.25
MMP1P03956 Y_RNA.711-201ENST00000516993 102 ntBASIC0.97□□□□□ -2.25
MMP1P03956 AL358944.1-201ENST00000528537 144 ntBASIC0.97□□□□□ -2.25
MMP1P03956 AC020661.2-201ENST00000560114 134 ntBASIC0.97□□□□□ -2.25
MMP1P03956 MIR4698-201ENST00000577795 80 ntBASIC0.97□□□□□ -2.25
MMP1P03956 DEFB117-201ENST00000602356 141 ntBASIC0.97□□□□□ -2.25
MMP1P03956 AL513534.2-201ENST00000603836 250 ntBASIC0.97□□□□□ -2.25
MMP1P03956 AL022345.2-201ENST00000606307 135 ntBASIC0.97□□□□□ -2.25
MMP1P03956 SNORA28-201ENST00000606769 126 ntBASIC0.97□□□□□ -2.25
MMP1P03956 BX284668.6-201ENST00000606899 438 ntBASIC0.97□□□□□ -2.25
MMP1P03956 AC108706.1-201ENST00000611053 297 ntBASIC0.97□□□□□ -2.25
MMP1P03956 AC242852.1-201ENST00000612151 96 ntBASIC0.97□□□□□ -2.25
MMP1P03956 AC244015.1-201ENST00000622301 99 ntBASIC0.97□□□□□ -2.25
MMP1P03956 SNORD3E-202ENST00000627253 216 ntBASIC0.97□□□□□ -2.25
MMP1P03956 RNU6-797P-201ENST00000363101 109 ntBASIC0.96□□□□□ -2.26
MMP1P03956 Y_RNA.128-201ENST00000363391 112 ntBASIC0.96□□□□□ -2.26
MMP1P03956 RNU6-450P-201ENST00000364654 107 ntBASIC0.96□□□□□ -2.26
MMP1P03956 Y_RNA.310-201ENST00000365063 113 ntBASIC0.96□□□□□ -2.26
MMP1P03956 SNORA22B-201ENST00000383876 138 ntBASIC0.96□□□□□ -2.26
MMP1P03956 Y_RNA.526-201ENST00000384572 110 ntBASIC0.96□□□□□ -2.26
MMP1P03956 MIR562-201ENST00000384894 95 ntBASIC0.96□□□□□ -2.26
MMP1P03956 RNA5SP482-201ENST00000391269 118 ntBASIC0.96□□□□□ -2.26
MMP1P03956 AL590004.1-201ENST00000405321 300 ntBASIC0.96□□□□□ -2.26
MMP1P03956 AC093850.1-201ENST00000454121 251 ntBASIC0.96□□□□□ -2.26
MMP1P03956 RNU7-28P-201ENST00000516759 62 ntBASIC0.96□□□□□ -2.26
MMP1P03956 RNU6-1116P-201ENST00000517269 99 ntBASIC0.96□□□□□ -2.26
MMP1P03956 MIR3145-201ENST00000580727 82 ntBASIC0.96□□□□□ -2.26
MMP1P03956 RAC1P9-201ENST00000604990 392 ntBASIC0.96□□□□□ -2.26
MMP1P03956 AC011373.1-201ENST00000607270 237 ntBASIC0.96□□□□□ -2.26
MMP1P03956 AC106754.2-201ENST00000623006 233 ntBASIC0.96□□□□□ -2.26
MMP1P03956 AC134503.1-201ENST00000633048 54 ntBASIC0.96□□□□□ -2.26
MMP1P03956 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
MMP1P03956 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
MMP1P03956 Y_RNA.105-201ENST00000363182 111 ntBASIC0.95□□□□□ -2.26
MMP1P03956 SNORD114-2-201ENST00000363953 78 ntBASIC0.95□□□□□ -2.26
MMP1P03956 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.95□□□□□ -2.26
MMP1P03956 RNU6-351P-201ENST00000516097 100 ntBASIC0.95□□□□□ -2.26
MMP1P03956 RNU6-917P-201ENST00000516294 104 ntBASIC0.95□□□□□ -2.26
MMP1P03956 RNU7-110P-201ENST00000516891 62 ntBASIC0.95□□□□□ -2.26
MMP1P03956 Y_RNA.715-201ENST00000517082 110 ntBASIC0.95□□□□□ -2.26
MMP1P03956 MIR4714-201ENST00000580728 77 ntBASIC0.95□□□□□ -2.26
MMP1P03956 AL591926.4-201ENST00000616895 298 ntBASIC0.95□□□□□ -2.26
MMP1P03956 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 191.7 ms