Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 Z83818.1-201ENST00000603584 150 ntBASIC0.64□□□□□ -2.31
MT-ND3P03897 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.64□□□□□ -2.31
MT-ND3P03897 RNA5SP347-201ENST00000362445 119 ntBASIC0.63□□□□□ -2.31
MT-ND3P03897 RNU6-1335P-201ENST00000365426 107 ntBASIC0.63□□□□□ -2.31
MT-ND3P03897 Y_RNA.446-201ENST00000384178 104 ntBASIC0.63□□□□□ -2.31
MT-ND3P03897 RNU6-192P-201ENST00000391253 100 ntBASIC0.63□□□□□ -2.31
MT-ND3P03897 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
MT-ND3P03897 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.63□□□□□ -2.31
MT-ND3P03897 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.63□□□□□ -2.31
MT-ND3P03897 RNU4-54P-201ENST00000516428 129 ntBASIC0.63□□□□□ -2.31
MT-ND3P03897 DEFB108E-201ENST00000524692 240 ntBASIC0.63□□□□□ -2.31
MT-ND3P03897 AC004817.2-201ENST00000561794 651 ntBASIC0.63□□□□□ -2.31
MT-ND3P03897 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.63□□□□□ -2.31
MT-ND3P03897 AC073869.6-201ENST00000640656 341 ntBASIC0.63□□□□□ -2.31
MT-ND3P03897 RNU6-626P-201ENST00000363354 107 ntBASIC0.62□□□□□ -2.31
MT-ND3P03897 SNORD50B-201ENST00000364995 70 ntBASIC0.62□□□□□ -2.31
MT-ND3P03897 RNU6-20P-201ENST00000384106 107 ntBASIC0.62□□□□□ -2.31
MT-ND3P03897 RNU6-767P-201ENST00000384132 107 ntBASIC0.62□□□□□ -2.31
MT-ND3P03897 SNORD38C-201ENST00000384381 69 ntBASIC0.62□□□□□ -2.31
MT-ND3P03897 SNORA75.6-201ENST00000391318 127 ntBASIC0.62□□□□□ -2.31
MT-ND3P03897 AL390729.2-201ENST00000416137 156 ntBASIC0.62□□□□□ -2.31
MT-ND3P03897 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.62□□□□□ -2.31
MT-ND3P03897 RNU6-436P-201ENST00000516171 114 ntBASIC0.62□□□□□ -2.31
MT-ND3P03897 RNU7-116P-201ENST00000516940 62 ntBASIC0.62□□□□□ -2.31
MT-ND3P03897 AC004812.1-201ENST00000540773 146 ntBASIC0.62□□□□□ -2.31
MT-ND3P03897 MIR5690-201ENST00000583739 73 ntBASIC0.62□□□□□ -2.31
MT-ND3P03897 AC087685.1-201ENST00000587507 141 ntBASIC0.62□□□□□ -2.31
MT-ND3P03897 RBM11P1-201ENST00000604951 799 ntBASIC0.62□□□□□ -2.31
MT-ND3P03897 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.62□□□□□ -2.31
MT-ND3P03897 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.62□□□□□ -2.31
MT-ND3P03897 MIR4251-201ENST00000635819 61 ntBASIC0.62□□□□□ -2.31
MT-ND3P03897 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
MT-ND3P03897 SNORD14E-201ENST00000364009 85 ntBASIC0.61□□□□□ -2.31
MT-ND3P03897 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
MT-ND3P03897 RNU1-119P-201ENST00000391122 165 ntBASIC0.61□□□□□ -2.31
MT-ND3P03897 AL392103.1-201ENST00000447000 198 ntBASIC0.61□□□□□ -2.31
MT-ND3P03897 AC091925.1-201ENST00000623204 462 ntBASIC0.61□□□□□ -2.31
MT-ND3P03897 AC008133.2-201ENST00000624540 351 ntBASIC0.61□□□□□ -2.31
MT-ND3P03897 AC134026.1-201ENST00000623249 2239 ntBASIC0.61□□□□□ -2.31
MT-ND3P03897 Y_RNA.368-201ENST00000365547 113 ntBASIC0.6□□□□□ -2.31
MT-ND3P03897 RNU6-1323P-201ENST00000384025 107 ntBASIC0.6□□□□□ -2.31
MT-ND3P03897 MIR936-201ENST00000401264 98 ntBASIC0.6□□□□□ -2.31
MT-ND3P03897 Y_RNA.605-201ENST00000410577 105 ntBASIC0.6□□□□□ -2.31
MT-ND3P03897 MTND1P2-201ENST00000430604 821 ntBASIC0.6□□□□□ -2.31
MT-ND3P03897 AC005534.2-201ENST00000431047 433 ntBASIC0.6□□□□□ -2.31
MT-ND3P03897 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.6□□□□□ -2.31
MT-ND3P03897 RNU6-911P-201ENST00000516523 104 ntBASIC0.6□□□□□ -2.31
MT-ND3P03897 RNU6-1012P-201ENST00000516606 109 ntBASIC0.6□□□□□ -2.31
MT-ND3P03897 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.6□□□□□ -2.31
MT-ND3P03897 RNU6-94P-201ENST00000607728 107 ntBASIC0.6□□□□□ -2.31
MT-ND3P03897 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
MT-ND3P03897 Y_RNA.172-201ENST00000363765 102 ntBASIC0.59□□□□□ -2.31
MT-ND3P03897 RNU6-1199P-201ENST00000411249 104 ntBASIC0.59□□□□□ -2.31
MT-ND3P03897 Y_RNA.691-201ENST00000516611 103 ntBASIC0.59□□□□□ -2.31
MT-ND3P03897 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.59□□□□□ -2.31
MT-ND3P03897 AC098679.4-201ENST00000624241 654 ntBASIC0.59□□□□□ -2.31
MT-ND3P03897 MIR1-1-201ENST00000362147 71 ntBASIC0.58□□□□□ -2.32
MT-ND3P03897 Y_RNA.166-201ENST00000363730 102 ntBASIC0.58□□□□□ -2.32
MT-ND3P03897 RNY1P4-201ENST00000384595 115 ntBASIC0.58□□□□□ -2.32
MT-ND3P03897 MIR628-201ENST00000385229 95 ntBASIC0.58□□□□□ -2.32
MT-ND3P03897 MIR1827-201ENST00000408549 66 ntBASIC0.58□□□□□ -2.32
MT-ND3P03897 RNU6-1304P-201ENST00000411374 106 ntBASIC0.58□□□□□ -2.32
MT-ND3P03897 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.58□□□□□ -2.32
MT-ND3P03897 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.58□□□□□ -2.32
MT-ND3P03897 MIR2115-201ENST00000516657 100 ntBASIC0.58□□□□□ -2.32
MT-ND3P03897 RNU6-1213P-201ENST00000517075 94 ntBASIC0.58□□□□□ -2.32
MT-ND3P03897 AP003484.1-201ENST00000530974 250 ntBASIC0.58□□□□□ -2.32
MT-ND3P03897 AC022441.3-201ENST00000605737 136 ntBASIC0.58□□□□□ -2.32
MT-ND3P03897 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.58□□□□□ -2.32
MT-ND3P03897 AL355073.2-201ENST00000612106 557 ntBASIC0.58□□□□□ -2.32
MT-ND3P03897 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
MT-ND3P03897 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
MT-ND3P03897 Y_RNA.146-201ENST00000363549 102 ntBASIC0.57□□□□□ -2.32
MT-ND3P03897 RNU6-613P-201ENST00000410412 108 ntBASIC0.57□□□□□ -2.32
MT-ND3P03897 MCFD2P1-201ENST00000417812 300 ntBASIC0.57□□□□□ -2.32
MT-ND3P03897 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.57□□□□□ -2.32
MT-ND3P03897 MIR4659A-201ENST00000580269 81 ntBASIC0.57□□□□□ -2.32
MT-ND3P03897 AC005730.3-201ENST00000583067 366 ntBASIC0.57□□□□□ -2.32
MT-ND3P03897 AC104695.3-201ENST00000604052 296 ntBASIC0.57□□□□□ -2.32
MT-ND3P03897 AC025253.1-201ENST00000613623 543 ntBASIC0.57□□□□□ -2.32
MT-ND3P03897 JPX_2.1-201ENST00000614161 69 ntBASIC0.57□□□□□ -2.32
MT-ND3P03897 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
MT-ND3P03897 RNU6-845P-201ENST00000362578 103 ntBASIC0.56□□□□□ -2.32
MT-ND3P03897 SNORD114-23-201ENST00000363536 72 ntBASIC0.56□□□□□ -2.32
MT-ND3P03897 RNU6-442P-201ENST00000383968 104 ntBASIC0.56□□□□□ -2.32
MT-ND3P03897 SNORA2B-201ENST00000384583 137 ntBASIC0.56□□□□□ -2.32
MT-ND3P03897 SNORD105-201ENST00000386910 85 ntBASIC0.56□□□□□ -2.32
MT-ND3P03897 MIR802-201ENST00000390235 94 ntBASIC0.56□□□□□ -2.32
MT-ND3P03897 RNU6-855P-201ENST00000410395 104 ntBASIC0.56□□□□□ -2.32
MT-ND3P03897 RNU6-370P-201ENST00000411008 104 ntBASIC0.56□□□□□ -2.32
MT-ND3P03897 FCF1P9-201ENST00000412546 282 ntBASIC0.56□□□□□ -2.32
MT-ND3P03897 AC024067.1-201ENST00000426199 223 ntBASIC0.56□□□□□ -2.32
MT-ND3P03897 AC092628.1-201ENST00000436250 252 ntBASIC0.56□□□□□ -2.32
MT-ND3P03897 AC069439.1-201ENST00000494739 167 ntBASIC0.56□□□□□ -2.32
MT-ND3P03897 RN7SKP295-201ENST00000517264 153 ntBASIC0.56□□□□□ -2.32
MT-ND3P03897 AC011195.1-201ENST00000578177 177 ntBASIC0.56□□□□□ -2.32
MT-ND3P03897 MIR4300-201ENST00000581016 96 ntBASIC0.56□□□□□ -2.32
MT-ND3P03897 AL512605.2-201ENST00000592972 256 ntBASIC0.56□□□□□ -2.32
MT-ND3P03897 AC133104.2-201ENST00000615272 193 ntBASIC0.56□□□□□ -2.32
MT-ND3P03897 MIR6779-201ENST00000617283 64 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms