Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RNU6-1116P-201ENST00000517269 99 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 SUMO2P16-201ENST00000519475 264 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 DEFB108E-201ENST00000524692 240 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 AL358944.1-201ENST00000528537 144 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 AL161670.1-201ENST00000554348 137 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 POLR3GP1-201ENST00000594073 261 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 AP003357.1-201ENST00000604497 148 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 AL591926.4-201ENST00000616895 298 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.25□□□□□ -2.21
MT-ND1P03886 Y_RNA.237-201ENST00000364439 102 ntBASIC1.24□□□□□ -2.21
MT-ND1P03886 Y_RNA.396-201ENST00000383949 103 ntBASIC1.24□□□□□ -2.21
MT-ND1P03886 RNU6-662P-201ENST00000384253 104 ntBASIC1.24□□□□□ -2.21
MT-ND1P03886 SNORA72-201ENST00000384339 132 ntBASIC1.24□□□□□ -2.21
MT-ND1P03886 RNU6-424P-201ENST00000384367 105 ntBASIC1.24□□□□□ -2.21
MT-ND1P03886 RNU6-763P-201ENST00000390865 106 ntBASIC1.24□□□□□ -2.21
MT-ND1P03886 RNU11-5P-201ENST00000391216 129 ntBASIC1.24□□□□□ -2.21
MT-ND1P03886 AL034345.1-201ENST00000407768 123 ntBASIC1.24□□□□□ -2.21
MT-ND1P03886 MIR1261-201ENST00000408659 82 ntBASIC1.24□□□□□ -2.21
MT-ND1P03886 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.24□□□□□ -2.21
MT-ND1P03886 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.24□□□□□ -2.21
MT-ND1P03886 AC024067.1-201ENST00000426199 223 ntBASIC1.24□□□□□ -2.21
MT-ND1P03886 PGBD4P5-201ENST00000445958 426 ntBASIC1.24□□□□□ -2.21
MT-ND1P03886 AL118496.2-201ENST00000448300 230 ntBASIC1.24□□□□□ -2.21
MT-ND1P03886 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.24□□□□□ -2.21
MT-ND1P03886 TRBVB-201ENST00000477100 408 ntBASIC1.24□□□□□ -2.21
MT-ND1P03886 AC091959.1-201ENST00000495857 238 ntBASIC1.24□□□□□ -2.21
MT-ND1P03886 SERF1AP1-201ENST00000514575 187 ntBASIC1.24□□□□□ -2.21
MT-ND1P03886 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.24□□□□□ -2.21
MT-ND1P03886 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
MT-ND1P03886 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
MT-ND1P03886 MIR562-201ENST00000384894 95 ntBASIC1.23□□□□□ -2.21
MT-ND1P03886 MIR513A1-201ENST00000385138 129 ntBASIC1.23□□□□□ -2.21
MT-ND1P03886 Y_RNA.621-201ENST00000411065 96 ntBASIC1.23□□□□□ -2.21
MT-ND1P03886 AC015922.2-201ENST00000435593 184 ntBASIC1.23□□□□□ -2.21
MT-ND1P03886 AL162424.1-201ENST00000602325 221 ntBASIC1.23□□□□□ -2.21
MT-ND1P03886 AC073349.3-201ENST00000617616 186 ntBASIC1.23□□□□□ -2.21
MT-ND1P03886 Y_RNA.176-201ENST00000363815 109 ntBASIC1.22□□□□□ -2.21
MT-ND1P03886 Y_RNA.217-201ENST00000364214 105 ntBASIC1.22□□□□□ -2.21
MT-ND1P03886 Y_RNA.253-201ENST00000364562 112 ntBASIC1.22□□□□□ -2.21
MT-ND1P03886 RNA5SP482-201ENST00000391269 118 ntBASIC1.22□□□□□ -2.21
MT-ND1P03886 MTCO2P33-201ENST00000402100 465 ntBASIC1.22□□□□□ -2.21
MT-ND1P03886 MIR1278-201ENST00000408753 81 ntBASIC1.22□□□□□ -2.21
MT-ND1P03886 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.22□□□□□ -2.21
MT-ND1P03886 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.22□□□□□ -2.21
MT-ND1P03886 AC093850.1-201ENST00000454121 251 ntBASIC1.22□□□□□ -2.21
MT-ND1P03886 Y_RNA.641-201ENST00000459414 105 ntBASIC1.22□□□□□ -2.21
MT-ND1P03886 RNU6-1045P-201ENST00000516321 107 ntBASIC1.22□□□□□ -2.21
MT-ND1P03886 SNORA27.4-201ENST00000516650 95 ntBASIC1.22□□□□□ -2.21
MT-ND1P03886 RNU7-28P-201ENST00000516759 62 ntBASIC1.22□□□□□ -2.21
MT-ND1P03886 AC127455.1-201ENST00000565496 145 ntBASIC1.22□□□□□ -2.21
MT-ND1P03886 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.22□□□□□ -2.21
MT-ND1P03886 MIR4778-201ENST00000577635 80 ntBASIC1.22□□□□□ -2.21
MT-ND1P03886 SNORA28-201ENST00000606769 126 ntBASIC1.22□□□□□ -2.21
MT-ND1P03886 MIR548AY-201ENST00000617669 107 ntBASIC1.22□□□□□ -2.21
MT-ND1P03886 AL513423.1-201ENST00000621695 132 ntBASIC1.22□□□□□ -2.21
MT-ND1P03886 MIR7843-201ENST00000622274 79 ntBASIC1.22□□□□□ -2.21
MT-ND1P03886 RNU6-1123P-201ENST00000362347 106 ntBASIC1.21□□□□□ -2.22
MT-ND1P03886 RNU6-457P-201ENST00000363999 107 ntBASIC1.21□□□□□ -2.22
MT-ND1P03886 Y_RNA.461-201ENST00000384263 103 ntBASIC1.21□□□□□ -2.22
MT-ND1P03886 RNU6-713P-201ENST00000384761 107 ntBASIC1.21□□□□□ -2.22
MT-ND1P03886 MIR660-201ENST00000385235 97 ntBASIC1.21□□□□□ -2.22
MT-ND1P03886 RNU6-1248P-201ENST00000391096 64 ntBASIC1.21□□□□□ -2.22
MT-ND1P03886 SNORA53-201ENST00000391141 249 ntBASIC1.21□□□□□ -2.22
MT-ND1P03886 RNU6-651P-201ENST00000411040 105 ntBASIC1.21□□□□□ -2.22
MT-ND1P03886 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.21□□□□□ -2.22
MT-ND1P03886 RPL23AP54-201ENST00000495129 419 ntBASIC1.21□□□□□ -2.22
MT-ND1P03886 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.21□□□□□ -2.22
MT-ND1P03886 MTCO2P24-201ENST00000515611 426 ntBASIC1.21□□□□□ -2.22
MT-ND1P03886 AL512605.2-201ENST00000592972 256 ntBASIC1.21□□□□□ -2.22
MT-ND1P03886 AL365434.2-201ENST00000607979 234 ntBASIC1.21□□□□□ -2.22
MT-ND1P03886 SNORD3E-202ENST00000627253 216 ntBASIC1.21□□□□□ -2.22
MT-ND1P03886 snoU18.1-201ENST00000629629 71 ntBASIC1.21□□□□□ -2.22
MT-ND1P03886 ZNF209P-201ENST00000593450 2304 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 SNORA25.1-201ENST00000362326 128 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 RNU6-1272P-201ENST00000362776 107 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 SNORD68-201ENST00000363214 84 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 Y_RNA.117-201ENST00000363294 101 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 SNORA25.8-201ENST00000364831 128 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 RNA5SP259-201ENST00000365541 109 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 Y_RNA.518-201ENST00000384552 113 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 MIR522-201ENST00000385071 87 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 MIR1302-6-201ENST00000408466 90 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 SNORA36B-201ENST00000410438 131 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.2□□□□□ -2.22
MT-ND1P03886 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.2□□□□□ -2.22
MT-ND1P03886 RNU1-123P-201ENST00000458950 160 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 AC004223.1-201ENST00000479840 271 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 RNU7-116P-201ENST00000516940 62 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.2□□□□□ -2.22
MT-ND1P03886 AC019288.1-201ENST00000557918 224 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 CYP3A52P-201ENST00000563326 91 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 MIR4303-201ENST00000581299 66 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 MIR4762-201ENST00000585261 75 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 AC005357.1-201ENST00000588399 301 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 AL008718.3-201ENST00000610217 321 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 MIR8065-201ENST00000620577 100 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 AC106754.2-201ENST00000623006 233 ntBASIC1.2□□□□□ -2.22
MT-ND1P03886 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.2□□□□□ -2.22
MT-ND1P03886 AL391987.6-201ENST00000305671 199 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 348.9 ms