Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 MIR6767-201ENST00000637302 66 ntBASIC0.68□□□□□ -2.3
MBD3O95983 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.67□□□□□ -2.3
MBD3O95983 RNU6-324P-201ENST00000363957 106 ntBASIC0.67□□□□□ -2.3
MBD3O95983 SNORD50B-201ENST00000364995 70 ntBASIC0.67□□□□□ -2.3
MBD3O95983 Y_RNA.355-201ENST00000365462 98 ntBASIC0.67□□□□□ -2.3
MBD3O95983 Y_RNA.370-201ENST00000365589 108 ntBASIC0.67□□□□□ -2.3
MBD3O95983 MIR516B2-201ENST00000385190 85 ntBASIC0.67□□□□□ -2.3
MBD3O95983 SNORD111-201ENST00000408139 94 ntBASIC0.67□□□□□ -2.3
MBD3O95983 Y_RNA.599-201ENST00000410489 109 ntBASIC0.67□□□□□ -2.3
MBD3O95983 SNORD123-201ENST00000459473 70 ntBASIC0.67□□□□□ -2.3
MBD3O95983 MTND4P17-201ENST00000470444 350 ntBASIC0.67□□□□□ -2.3
MBD3O95983 AC098869.1-201ENST00000481627 292 ntBASIC0.67□□□□□ -2.3
MBD3O95983 RNU7-41P-201ENST00000515917 61 ntBASIC0.67□□□□□ -2.3
MBD3O95983 AP003484.1-201ENST00000530974 250 ntBASIC0.67□□□□□ -2.3
MBD3O95983 AC109810.1-201ENST00000534066 224 ntBASIC0.67□□□□□ -2.3
MBD3O95983 MIR4423-201ENST00000580922 80 ntBASIC0.67□□□□□ -2.3
MBD3O95983 AC104465.1-201ENST00000611365 139 ntBASIC0.67□□□□□ -2.3
MBD3O95983 MIR6788-201ENST00000618842 66 ntBASIC0.67□□□□□ -2.3
MBD3O95983 AC068700.1-201ENST00000565862 3754 ntBASIC0.67□□□□□ -2.3
MBD3O95983 Y_RNA.456-201ENST00000384232 111 ntBASIC0.66□□□□□ -2.3
MBD3O95983 Y_RNA.462-201ENST00000384268 102 ntBASIC0.66□□□□□ -2.3
MBD3O95983 MIR613-201ENST00000385248 95 ntBASIC0.66□□□□□ -2.3
MBD3O95983 SNRPGP10-201ENST00000432323 225 ntBASIC0.66□□□□□ -2.3
MBD3O95983 AL392103.1-201ENST00000447000 198 ntBASIC0.66□□□□□ -2.3
MBD3O95983 RPS29P1-201ENST00000465274 159 ntBASIC0.66□□□□□ -2.3
MBD3O95983 RNU6-830P-201ENST00000516353 107 ntBASIC0.66□□□□□ -2.3
MBD3O95983 SNORA18.7-201ENST00000516910 131 ntBASIC0.66□□□□□ -2.3
MBD3O95983 SNORA4-201ENST00000584302 138 ntBASIC0.66□□□□□ -2.3
MBD3O95983 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.66□□□□□ -2.3
MBD3O95983 Y_RNA.248-201ENST00000364501 109 ntBASIC0.65□□□□□ -2.31
MBD3O95983 RNU1-93P-201ENST00000364704 169 ntBASIC0.65□□□□□ -2.31
MBD3O95983 Y_RNA.310-201ENST00000365063 113 ntBASIC0.65□□□□□ -2.31
MBD3O95983 Y_RNA.330-201ENST00000365230 109 ntBASIC0.65□□□□□ -2.31
MBD3O95983 Y_RNA.368-201ENST00000365547 113 ntBASIC0.65□□□□□ -2.31
MBD3O95983 Y_RNA.570-201ENST00000384750 101 ntBASIC0.65□□□□□ -2.31
MBD3O95983 SNORD89-201ENST00000390981 114 ntBASIC0.65□□□□□ -2.31
MBD3O95983 RNU6-876P-201ENST00000391295 104 ntBASIC0.65□□□□□ -2.31
MBD3O95983 AC005042.3-201ENST00000453230 174 ntBASIC0.65□□□□□ -2.31
MBD3O95983 COX6CP6-201ENST00000490840 228 ntBASIC0.65□□□□□ -2.31
MBD3O95983 VN1R91P-201ENST00000594377 169 ntBASIC0.65□□□□□ -2.31
MBD3O95983 AL136317.1-201ENST00000612653 226 ntBASIC0.65□□□□□ -2.31
MBD3O95983 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.65□□□□□ -2.31
MBD3O95983 Y_RNA.329-201ENST00000365209 107 ntBASIC0.64□□□□□ -2.31
MBD3O95983 MIR520E-201ENST00000384867 87 ntBASIC0.64□□□□□ -2.31
MBD3O95983 MIR559-201ENST00000385188 96 ntBASIC0.64□□□□□ -2.31
MBD3O95983 MIR628-201ENST00000385229 95 ntBASIC0.64□□□□□ -2.31
MBD3O95983 MLLT10P1-201ENST00000418346 262 ntBASIC0.64□□□□□ -2.31
MBD3O95983 MTCO3P10-201ENST00000455912 772 ntBASIC0.64□□□□□ -2.31
MBD3O95983 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.64□□□□□ -2.31
MBD3O95983 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
MBD3O95983 Y_RNA.314-201ENST00000365114 102 ntBASIC0.63□□□□□ -2.31
MBD3O95983 AC024067.1-201ENST00000426199 223 ntBASIC0.63□□□□□ -2.31
MBD3O95983 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.63□□□□□ -2.31
MBD3O95983 RNU7-169P-201ENST00000459456 61 ntBASIC0.63□□□□□ -2.31
MBD3O95983 RNU6-559P-201ENST00000516151 98 ntBASIC0.63□□□□□ -2.31
MBD3O95983 RNU6-966P-201ENST00000516479 104 ntBASIC0.63□□□□□ -2.31
MBD3O95983 AC036111.3-201ENST00000526389 112 ntBASIC0.63□□□□□ -2.31
MBD3O95983 AP003357.1-201ENST00000604497 148 ntBASIC0.63□□□□□ -2.31
MBD3O95983 RMST_2.1-201ENST00000617263 136 ntBASIC0.63□□□□□ -2.31
MBD3O95983 U6.92-201ENST00000636464 89 ntBASIC0.63□□□□□ -2.31
MBD3O95983 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
MBD3O95983 SNORD14E-201ENST00000364009 85 ntBASIC0.62□□□□□ -2.31
MBD3O95983 SNORD113.3-201ENST00000364630 78 ntBASIC0.62□□□□□ -2.31
MBD3O95983 RNU6-1175P-201ENST00000365200 107 ntBASIC0.62□□□□□ -2.31
MBD3O95983 Y_RNA.341-201ENST00000365341 102 ntBASIC0.62□□□□□ -2.31
MBD3O95983 Y_RNA.387-201ENST00000383918 102 ntBASIC0.62□□□□□ -2.31
MBD3O95983 RNU6-1297P-201ENST00000384415 104 ntBASIC0.62□□□□□ -2.31
MBD3O95983 MIR508-201ENST00000384857 115 ntBASIC0.62□□□□□ -2.31
MBD3O95983 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
MBD3O95983 RPL30P15-201ENST00000457129 321 ntBASIC0.62□□□□□ -2.31
MBD3O95983 DEFB108E-201ENST00000524692 240 ntBASIC0.62□□□□□ -2.31
MBD3O95983 AC004812.1-201ENST00000540773 146 ntBASIC0.62□□□□□ -2.31
MBD3O95983 POLR3GP1-201ENST00000594073 261 ntBASIC0.62□□□□□ -2.31
MBD3O95983 MIR6515-201ENST00000619843 57 ntBASIC0.62□□□□□ -2.31
MBD3O95983 AC091925.1-201ENST00000623204 462 ntBASIC0.62□□□□□ -2.31
MBD3O95983 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
MBD3O95983 AC134026.1-201ENST00000623249 2239 ntBASIC0.62□□□□□ -2.31
MBD3O95983 SNORA25.3-201ENST00000363205 127 ntBASIC0.61□□□□□ -2.31
MBD3O95983 Y_RNA.203-201ENST00000364106 102 ntBASIC0.61□□□□□ -2.31
MBD3O95983 Y_RNA.242-201ENST00000364473 110 ntBASIC0.61□□□□□ -2.31
MBD3O95983 SNORD38C-201ENST00000384381 69 ntBASIC0.61□□□□□ -2.31
MBD3O95983 RNU6-1067P-201ENST00000384752 107 ntBASIC0.61□□□□□ -2.31
MBD3O95983 MIR548J-201ENST00000408833 112 ntBASIC0.61□□□□□ -2.31
MBD3O95983 RNU6-855P-201ENST00000410395 104 ntBASIC0.61□□□□□ -2.31
MBD3O95983 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.61□□□□□ -2.31
MBD3O95983 AL157398.1-201ENST00000452981 186 ntBASIC0.61□□□□□ -2.31
MBD3O95983 AC067940.1-201ENST00000458411 300 ntBASIC0.61□□□□□ -2.31
MBD3O95983 AC023827.1-201ENST00000569247 97 ntBASIC0.61□□□□□ -2.31
MBD3O95983 AC011476.5-201ENST00000615594 130 ntBASIC0.61□□□□□ -2.31
MBD3O95983 MIR7111-201ENST00000619751 72 ntBASIC0.61□□□□□ -2.31
MBD3O95983 AC008133.2-201ENST00000624540 351 ntBASIC0.61□□□□□ -2.31
MBD3O95983 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
MBD3O95983 RNU6-1040P-201ENST00000383974 107 ntBASIC0.6□□□□□ -2.31
MBD3O95983 Y_RNA.505-201ENST00000384489 102 ntBASIC0.6□□□□□ -2.31
MBD3O95983 MIR1302-7-201ENST00000408841 72 ntBASIC0.6□□□□□ -2.31
MBD3O95983 RNU6-613P-201ENST00000410412 108 ntBASIC0.6□□□□□ -2.31
MBD3O95983 AC098614.3-201ENST00000438957 440 ntBASIC0.6□□□□□ -2.31
MBD3O95983 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.6□□□□□ -2.31
MBD3O95983 AC091951.2-201ENST00000500762 203 ntBASIC0.6□□□□□ -2.31
MBD3O95983 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms