Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 NDUFA4P2-201ENST00000489989 244 ntBASIC0.51□□□□□ -2.33
RAB3DO95716 RNA5SP121-201ENST00000516537 101 ntBASIC0.51□□□□□ -2.33
RAB3DO95716 SNORA20.3-201ENST00000516880 132 ntBASIC0.51□□□□□ -2.33
RAB3DO95716 AC005730.3-201ENST00000583067 366 ntBASIC0.51□□□□□ -2.33
RAB3DO95716 VN1R91P-201ENST00000594377 169 ntBASIC0.51□□□□□ -2.33
RAB3DO95716 AC084781.2-201ENST00000615568 161 ntBASIC0.51□□□□□ -2.33
RAB3DO95716 MIR6835-201ENST00000621552 64 ntBASIC0.51□□□□□ -2.33
RAB3DO95716 MIR4272-201ENST00000635924 64 ntBASIC0.51□□□□□ -2.33
RAB3DO95716 RNU6-1209P-201ENST00000363655 107 ntBASIC0.5□□□□□ -2.33
RAB3DO95716 RNU6-1040P-201ENST00000383974 107 ntBASIC0.5□□□□□ -2.33
RAB3DO95716 Y_RNA.463-201ENST00000384271 102 ntBASIC0.5□□□□□ -2.33
RAB3DO95716 MIR1261-201ENST00000408659 82 ntBASIC0.5□□□□□ -2.33
RAB3DO95716 MIR1278-201ENST00000408753 81 ntBASIC0.5□□□□□ -2.33
RAB3DO95716 RNU6-710P-201ENST00000410424 105 ntBASIC0.5□□□□□ -2.33
RAB3DO95716 AC010655.3-201ENST00000478818 450 ntBASIC0.5□□□□□ -2.33
RAB3DO95716 RPL23AP54-201ENST00000495129 419 ntBASIC0.5□□□□□ -2.33
RAB3DO95716 Y_RNA.714-201ENST00000517065 90 ntBASIC0.5□□□□□ -2.33
RAB3DO95716 Y_RNA.718-201ENST00000517110 102 ntBASIC0.5□□□□□ -2.33
RAB3DO95716 AC093027.1-201ENST00000546698 429 ntBASIC0.5□□□□□ -2.33
RAB3DO95716 AC133104.2-201ENST00000615272 193 ntBASIC0.5□□□□□ -2.33
RAB3DO95716 AC104985.2-201ENST00000620598 500 ntBASIC0.5□□□□□ -2.33
RAB3DO95716 AL442644.1-201ENST00000454390 3105 ntBASIC0.5□□□□□ -2.33
RAB3DO95716 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
RAB3DO95716 SNORD18A-201ENST00000363753 72 ntBASIC0.49□□□□□ -2.33
RAB3DO95716 Y_RNA.796-201ENST00000364268 102 ntBASIC0.49□□□□□ -2.33
RAB3DO95716 Y_RNA.799-201ENST00000364992 102 ntBASIC0.49□□□□□ -2.33
RAB3DO95716 Y_RNA.387-201ENST00000383918 102 ntBASIC0.49□□□□□ -2.33
RAB3DO95716 Y_RNA.496-201ENST00000384444 101 ntBASIC0.49□□□□□ -2.33
RAB3DO95716 SNORD111-201ENST00000408139 94 ntBASIC0.49□□□□□ -2.33
RAB3DO95716 RNU6-994P-201ENST00000410507 111 ntBASIC0.49□□□□□ -2.33
RAB3DO95716 SNRPGP14-201ENST00000435400 219 ntBASIC0.49□□□□□ -2.33
RAB3DO95716 U8.19-201ENST00000459095 133 ntBASIC0.49□□□□□ -2.33
RAB3DO95716 RNU7-115P-201ENST00000516433 55 ntBASIC0.49□□□□□ -2.33
RAB3DO95716 RNU6-1110P-201ENST00000516462 101 ntBASIC0.49□□□□□ -2.33
RAB3DO95716 RNU6-113P-201ENST00000516653 101 ntBASIC0.49□□□□□ -2.33
RAB3DO95716 RNU7-116P-201ENST00000516940 62 ntBASIC0.49□□□□□ -2.33
RAB3DO95716 AP003484.1-201ENST00000530974 250 ntBASIC0.49□□□□□ -2.33
RAB3DO95716 AC025627.3-201ENST00000582078 182 ntBASIC0.49□□□□□ -2.33
RAB3DO95716 AP003357.1-201ENST00000604497 148 ntBASIC0.49□□□□□ -2.33
RAB3DO95716 AL353997.5-201ENST00000618886 171 ntBASIC0.49□□□□□ -2.33
RAB3DO95716 Y_RNA.142-201ENST00000363491 102 ntBASIC0.48□□□□□ -2.33
RAB3DO95716 RNU6-1048P-201ENST00000364054 107 ntBASIC0.48□□□□□ -2.33
RAB3DO95716 SNORD113.3-201ENST00000364630 78 ntBASIC0.48□□□□□ -2.33
RAB3DO95716 Y_RNA.327-201ENST00000365201 102 ntBASIC0.48□□□□□ -2.33
RAB3DO95716 Y_RNA.428-201ENST00000384078 102 ntBASIC0.48□□□□□ -2.33
RAB3DO95716 Y_RNA.456-201ENST00000384232 111 ntBASIC0.48□□□□□ -2.33
RAB3DO95716 Y_RNA.458-201ENST00000384240 102 ntBASIC0.48□□□□□ -2.33
RAB3DO95716 Y_RNA.505-201ENST00000384489 102 ntBASIC0.48□□□□□ -2.33
RAB3DO95716 SNORA2B-201ENST00000384583 137 ntBASIC0.48□□□□□ -2.33
RAB3DO95716 RNU4-30P-201ENST00000410245 143 ntBASIC0.48□□□□□ -2.33
RAB3DO95716 MTND1P14-201ENST00000427400 950 ntBASIC0.48□□□□□ -2.33
RAB3DO95716 HMGN1P10-201ENST00000474557 553 ntBASIC0.48□□□□□ -2.33
RAB3DO95716 RNU4-54P-201ENST00000516428 129 ntBASIC0.48□□□□□ -2.33
RAB3DO95716 RNU7-110P-201ENST00000516891 62 ntBASIC0.48□□□□□ -2.33
RAB3DO95716 RNU11-2P-201ENST00000516898 142 ntBASIC0.48□□□□□ -2.33
RAB3DO95716 SNORD116.3-201ENST00000517176 78 ntBASIC0.48□□□□□ -2.33
RAB3DO95716 AC127455.1-201ENST00000565496 145 ntBASIC0.48□□□□□ -2.33
RAB3DO95716 AC011195.1-201ENST00000578177 177 ntBASIC0.48□□□□□ -2.33
RAB3DO95716 JPX_2.1-201ENST00000614161 69 ntBASIC0.48□□□□□ -2.33
RAB3DO95716 MIR1302-1-201ENST00000637932 143 ntBASIC0.48□□□□□ -2.33
RAB3DO95716 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
RAB3DO95716 Y_RNA.80-201ENST00000362996 102 ntBASIC0.47□□□□□ -2.33
RAB3DO95716 RNU6-268P-201ENST00000364174 107 ntBASIC0.47□□□□□ -2.33
RAB3DO95716 SNORD38C-201ENST00000384381 69 ntBASIC0.47□□□□□ -2.33
RAB3DO95716 Y_RNA.485-201ENST00000384395 102 ntBASIC0.47□□□□□ -2.33
RAB3DO95716 AC244098.3-201ENST00000424803 96 ntBASIC0.47□□□□□ -2.33
RAB3DO95716 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.47□□□□□ -2.33
RAB3DO95716 AC067940.1-201ENST00000458411 300 ntBASIC0.47□□□□□ -2.33
RAB3DO95716 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.47□□□□□ -2.33
RAB3DO95716 RNU7-181P-201ENST00000517234 74 ntBASIC0.47□□□□□ -2.33
RAB3DO95716 MIR5188-201ENST00000583467 113 ntBASIC0.47□□□□□ -2.33
RAB3DO95716 AC136443.5-201ENST00000603741 370 ntBASIC0.47□□□□□ -2.33
RAB3DO95716 AC010205.1-201ENST00000616668 449 ntBASIC0.47□□□□□ -2.33
RAB3DO95716 MIR548AY-201ENST00000617669 107 ntBASIC0.47□□□□□ -2.33
RAB3DO95716 AC099654.14-201ENST00000638599 341 ntBASIC0.47□□□□□ -2.33
RAB3DO95716 SNORD114-27-201ENST00000363766 70 ntBASIC0.46□□□□□ -2.34
RAB3DO95716 Y_RNA.813-201ENST00000364639 102 ntBASIC0.46□□□□□ -2.34
RAB3DO95716 RNU6-442P-201ENST00000383968 104 ntBASIC0.46□□□□□ -2.34
RAB3DO95716 RNU6-937P-201ENST00000384325 106 ntBASIC0.46□□□□□ -2.34
RAB3DO95716 MIR508-201ENST00000384857 115 ntBASIC0.46□□□□□ -2.34
RAB3DO95716 RNU1-119P-201ENST00000391122 165 ntBASIC0.46□□□□□ -2.34
RAB3DO95716 U8.17-201ENST00000391292 132 ntBASIC0.46□□□□□ -2.34
RAB3DO95716 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.46□□□□□ -2.34
RAB3DO95716 RNU2-14P-201ENST00000411053 191 ntBASIC0.46□□□□□ -2.34
RAB3DO95716 AC005534.2-201ENST00000431047 433 ntBASIC0.46□□□□□ -2.34
RAB3DO95716 RBMX2P4-201ENST00000441256 376 ntBASIC0.46□□□□□ -2.34
RAB3DO95716 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.46□□□□□ -2.34
RAB3DO95716 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
RAB3DO95716 AC108210.2-201ENST00000503681 201 ntBASIC0.46□□□□□ -2.34
RAB3DO95716 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.46□□□□□ -2.34
RAB3DO95716 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.46□□□□□ -2.34
RAB3DO95716 AL355375.2-201ENST00000574825 175 ntBASIC0.46□□□□□ -2.34
RAB3DO95716 MIR548AO-201ENST00000579992 96 ntBASIC0.46□□□□□ -2.34
RAB3DO95716 MIR4300-201ENST00000581016 96 ntBASIC0.46□□□□□ -2.34
RAB3DO95716 AC092447.9-201ENST00000603395 144 ntBASIC0.46□□□□□ -2.34
RAB3DO95716 Y_RNA.772-201ENST00000606692 102 ntBASIC0.46□□□□□ -2.34
RAB3DO95716 AC011373.1-201ENST00000607270 237 ntBASIC0.46□□□□□ -2.34
RAB3DO95716 AL132765.2-201ENST00000610812 351 ntBASIC0.46□□□□□ -2.34
RAB3DO95716 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.46□□□□□ -2.34
RAB3DO95716 Pinc.1-201ENST00000616452 154 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms