Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 MIR4452-201ENST00000583004 71 ntBASIC0.83□□□□□ -2.28
CTDNEP1O95476 AL513534.2-201ENST00000603836 250 ntBASIC0.83□□□□□ -2.28
CTDNEP1O95476 AC108706.1-201ENST00000611053 297 ntBASIC0.83□□□□□ -2.28
CTDNEP1O95476 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.83□□□□□ -2.28
CTDNEP1O95476 Y_RNA.148-201ENST00000363557 117 ntBASIC0.82□□□□□ -2.28
CTDNEP1O95476 RNU5E-4P-201ENST00000364931 120 ntBASIC0.82□□□□□ -2.28
CTDNEP1O95476 RNU6-867P-201ENST00000364956 107 ntBASIC0.82□□□□□ -2.28
CTDNEP1O95476 Y_RNA.462-201ENST00000384268 102 ntBASIC0.82□□□□□ -2.28
CTDNEP1O95476 Y_RNA.551-201ENST00000384661 102 ntBASIC0.82□□□□□ -2.28
CTDNEP1O95476 MIR520E-201ENST00000384867 87 ntBASIC0.82□□□□□ -2.28
CTDNEP1O95476 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
CTDNEP1O95476 MIR1302-11-201ENST00000408051 138 ntBASIC0.82□□□□□ -2.28
CTDNEP1O95476 MIR1302-9-201ENST00000408365 138 ntBASIC0.82□□□□□ -2.28
CTDNEP1O95476 MIR1287-201ENST00000408492 90 ntBASIC0.82□□□□□ -2.28
CTDNEP1O95476 MIR1302-10-201ENST00000408734 138 ntBASIC0.82□□□□□ -2.28
CTDNEP1O95476 AC104332.1-201ENST00000440471 797 ntBASIC0.82□□□□□ -2.28
CTDNEP1O95476 snoU13.25-201ENST00000458945 104 ntBASIC0.82□□□□□ -2.28
CTDNEP1O95476 RNU6-1046P-201ENST00000516538 107 ntBASIC0.82□□□□□ -2.28
CTDNEP1O95476 AC104695.3-201ENST00000604052 296 ntBASIC0.82□□□□□ -2.28
CTDNEP1O95476 AL022345.2-201ENST00000606307 135 ntBASIC0.82□□□□□ -2.28
CTDNEP1O95476 Y_RNA.772-201ENST00000606692 102 ntBASIC0.82□□□□□ -2.28
CTDNEP1O95476 MIR1302-2-201ENST00000607096 138 ntBASIC0.82□□□□□ -2.28
CTDNEP1O95476 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.82□□□□□ -2.28
CTDNEP1O95476 AL008636.1-201ENST00000625038 1018 ntBASIC0.82□□□□□ -2.28
CTDNEP1O95476 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
CTDNEP1O95476 SNORD68-201ENST00000363214 84 ntBASIC0.81□□□□□ -2.28
CTDNEP1O95476 Y_RNA.138-201ENST00000363462 102 ntBASIC0.81□□□□□ -2.28
CTDNEP1O95476 RNU6-833P-201ENST00000363486 107 ntBASIC0.81□□□□□ -2.28
CTDNEP1O95476 Y_RNA.224-201ENST00000364308 111 ntBASIC0.81□□□□□ -2.28
CTDNEP1O95476 U8.5-201ENST00000364528 136 ntBASIC0.81□□□□□ -2.28
CTDNEP1O95476 Y_RNA.253-201ENST00000364562 112 ntBASIC0.81□□□□□ -2.28
CTDNEP1O95476 Y_RNA.363-201ENST00000365529 113 ntBASIC0.81□□□□□ -2.28
CTDNEP1O95476 SNORD63-201ENST00000384262 68 ntBASIC0.81□□□□□ -2.28
CTDNEP1O95476 Y_RNA.471-201ENST00000384312 102 ntBASIC0.81□□□□□ -2.28
CTDNEP1O95476 Y_RNA.621-201ENST00000411065 96 ntBASIC0.81□□□□□ -2.28
CTDNEP1O95476 U8.20-201ENST00000459445 131 ntBASIC0.81□□□□□ -2.28
CTDNEP1O95476 AC048334.1-201ENST00000477975 159 ntBASIC0.81□□□□□ -2.28
CTDNEP1O95476 AC114811.1-201ENST00000507207 168 ntBASIC0.81□□□□□ -2.28
CTDNEP1O95476 RNU6-475P-201ENST00000516073 104 ntBASIC0.81□□□□□ -2.28
CTDNEP1O95476 RNU7-110P-201ENST00000516891 62 ntBASIC0.81□□□□□ -2.28
CTDNEP1O95476 MIR4762-201ENST00000585261 75 ntBASIC0.81□□□□□ -2.28
CTDNEP1O95476 RPS29P30-201ENST00000600975 111 ntBASIC0.81□□□□□ -2.28
CTDNEP1O95476 AC120024.3-201ENST00000603167 156 ntBASIC0.81□□□□□ -2.28
CTDNEP1O95476 AC005972.2-201ENST00000604690 348 ntBASIC0.81□□□□□ -2.28
CTDNEP1O95476 GHRLOS.1-201ENST00000610995 70 ntBASIC0.81□□□□□ -2.28
CTDNEP1O95476 AL138825.1-201ENST00000618587 192 ntBASIC0.81□□□□□ -2.28
CTDNEP1O95476 RNU6-450P-201ENST00000364654 107 ntBASIC0.8□□□□□ -2.28
CTDNEP1O95476 SNORA2.2-201ENST00000365473 135 ntBASIC0.8□□□□□ -2.28
CTDNEP1O95476 Y_RNA.368-201ENST00000365547 113 ntBASIC0.8□□□□□ -2.28
CTDNEP1O95476 SNORD14.1-201ENST00000365609 90 ntBASIC0.8□□□□□ -2.28
CTDNEP1O95476 Y_RNA.439-201ENST00000384119 94 ntBASIC0.8□□□□□ -2.28
CTDNEP1O95476 MIR522-201ENST00000385071 87 ntBASIC0.8□□□□□ -2.28
CTDNEP1O95476 RNU6-855P-201ENST00000410395 104 ntBASIC0.8□□□□□ -2.28
CTDNEP1O95476 SNRPGP10-201ENST00000432323 225 ntBASIC0.8□□□□□ -2.28
CTDNEP1O95476 AC117454.1-201ENST00000491120 168 ntBASIC0.8□□□□□ -2.28
CTDNEP1O95476 RNU6-1170P-201ENST00000515974 106 ntBASIC0.8□□□□□ -2.28
CTDNEP1O95476 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.8□□□□□ -2.28
CTDNEP1O95476 MIR4661-201ENST00000582720 75 ntBASIC0.8□□□□□ -2.28
CTDNEP1O95476 FAM106DP-201ENST00000586416 501 ntBASIC0.8□□□□□ -2.28
CTDNEP1O95476 AC011373.1-201ENST00000607270 237 ntBASIC0.8□□□□□ -2.28
CTDNEP1O95476 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
CTDNEP1O95476 Y_RNA.61-201ENST00000362835 102 ntBASIC0.79□□□□□ -2.28
CTDNEP1O95476 Y_RNA.105-201ENST00000363182 111 ntBASIC0.79□□□□□ -2.28
CTDNEP1O95476 Y_RNA.216-201ENST00000364205 93 ntBASIC0.79□□□□□ -2.28
CTDNEP1O95476 RNU4-50P-201ENST00000364361 141 ntBASIC0.79□□□□□ -2.28
CTDNEP1O95476 U8.7-201ENST00000364940 136 ntBASIC0.79□□□□□ -2.28
CTDNEP1O95476 Y_RNA.341-201ENST00000365341 102 ntBASIC0.79□□□□□ -2.28
CTDNEP1O95476 RNU6-1323P-201ENST00000384025 107 ntBASIC0.79□□□□□ -2.28
CTDNEP1O95476 Y_RNA.445-201ENST00000384168 102 ntBASIC0.79□□□□□ -2.28
CTDNEP1O95476 SNORA72-201ENST00000384339 132 ntBASIC0.79□□□□□ -2.28
CTDNEP1O95476 RNU6-102P-201ENST00000384485 104 ntBASIC0.79□□□□□ -2.28
CTDNEP1O95476 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.79□□□□□ -2.28
CTDNEP1O95476 RNU2-14P-201ENST00000411053 191 ntBASIC0.79□□□□□ -2.28
CTDNEP1O95476 POLR2J4-204ENST00000418424 324 ntBASIC0.79□□□□□ -2.28
CTDNEP1O95476 HMGN1P10-201ENST00000474557 553 ntBASIC0.79□□□□□ -2.28
CTDNEP1O95476 CYCTP-201ENST00000504253 315 ntBASIC0.79□□□□□ -2.28
CTDNEP1O95476 SNORA31.2-201ENST00000516019 134 ntBASIC0.79□□□□□ -2.28
CTDNEP1O95476 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.79□□□□□ -2.28
CTDNEP1O95476 RAC1P9-201ENST00000604990 392 ntBASIC0.79□□□□□ -2.28
CTDNEP1O95476 AL096861.1-201ENST00000610899 123 ntBASIC0.79□□□□□ -2.28
CTDNEP1O95476 AC090971.5-201ENST00000621102 293 ntBASIC0.79□□□□□ -2.28
CTDNEP1O95476 AL160413.1-201ENST00000622780 310 ntBASIC0.79□□□□□ -2.28
CTDNEP1O95476 AC027279.3-201ENST00000625055 122 ntBASIC0.79□□□□□ -2.28
CTDNEP1O95476 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.79□□□□□ -2.28
CTDNEP1O95476 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
CTDNEP1O95476 RNU6-1048P-201ENST00000364054 107 ntBASIC0.78□□□□□ -2.28
CTDNEP1O95476 RNU6-801P-201ENST00000364087 105 ntBASIC0.78□□□□□ -2.28
CTDNEP1O95476 Y_RNA.418-201ENST00000384029 102 ntBASIC0.78□□□□□ -2.28
CTDNEP1O95476 RNU6-163P-201ENST00000384396 106 ntBASIC0.78□□□□□ -2.28
CTDNEP1O95476 Y_RNA.535-201ENST00000384612 99 ntBASIC0.78□□□□□ -2.28
CTDNEP1O95476 RNU6-823P-201ENST00000391042 103 ntBASIC0.78□□□□□ -2.28
CTDNEP1O95476 MIR891A-201ENST00000401237 79 ntBASIC0.78□□□□□ -2.28
CTDNEP1O95476 MIR1298-201ENST00000408783 112 ntBASIC0.78□□□□□ -2.28
CTDNEP1O95476 RNU6-1054P-201ENST00000411293 104 ntBASIC0.78□□□□□ -2.28
CTDNEP1O95476 AC022028.1-201ENST00000412054 408 ntBASIC0.78□□□□□ -2.28
CTDNEP1O95476 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.78□□□□□ -2.28
CTDNEP1O95476 RNU6-397P-201ENST00000516226 104 ntBASIC0.78□□□□□ -2.28
CTDNEP1O95476 RNU6-947P-201ENST00000516264 106 ntBASIC0.78□□□□□ -2.28
CTDNEP1O95476 Y_RNA.28-201ENST00000362554 111 ntBASIC0.77□□□□□ -2.29
CTDNEP1O95476 RNU4-80P-201ENST00000363200 141 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms