Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
RTN3O95197 RNU6-392P-201ENST00000364926 101 ntBASIC1.47□□□□□ -2.17
RTN3O95197 RNU6-1248P-201ENST00000391096 64 ntBASIC1.47□□□□□ -2.17
RTN3O95197 RNU6-917P-201ENST00000516294 104 ntBASIC1.47□□□□□ -2.17
RTN3O95197 RNU6-897P-201ENST00000517135 105 ntBASIC1.47□□□□□ -2.17
RTN3O95197 MIR3171-201ENST00000584270 74 ntBASIC1.47□□□□□ -2.17
RTN3O95197 RAC1P9-201ENST00000604990 392 ntBASIC1.47□□□□□ -2.17
RTN3O95197 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
RTN3O95197 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RTN3O95197 SNORD113-8-201ENST00000363497 74 ntBASIC1.46□□□□□ -2.18
RTN3O95197 Y_RNA.158-201ENST00000363651 101 ntBASIC1.46□□□□□ -2.18
RTN3O95197 Y_RNA.286-201ENST00000364813 102 ntBASIC1.46□□□□□ -2.18
RTN3O95197 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.46□□□□□ -2.18
RTN3O95197 RNU6-1116P-201ENST00000517269 99 ntBASIC1.46□□□□□ -2.18
RTN3O95197 POLR3GP1-201ENST00000594073 261 ntBASIC1.46□□□□□ -2.18
RTN3O95197 AP003357.1-201ENST00000604497 148 ntBASIC1.46□□□□□ -2.18
RTN3O95197 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.46□□□□□ -2.18
RTN3O95197 Y_RNA.222-201ENST00000364264 102 ntBASIC1.45□□□□□ -2.18
RTN3O95197 SNORD115-46-201ENST00000390982 71 ntBASIC1.45□□□□□ -2.18
RTN3O95197 PIGPP3-201ENST00000425307 415 ntBASIC1.45□□□□□ -2.18
RTN3O95197 AC010655.3-201ENST00000478818 450 ntBASIC1.45□□□□□ -2.18
RTN3O95197 HMGN1P7-201ENST00000491722 313 ntBASIC1.45□□□□□ -2.18
RTN3O95197 AC020661.2-201ENST00000560114 134 ntBASIC1.45□□□□□ -2.18
RTN3O95197 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
RTN3O95197 Y_RNA.191-201ENST00000363972 113 ntBASIC1.44□□□□□ -2.18
RTN3O95197 Y_RNA.455-201ENST00000384230 98 ntBASIC1.44□□□□□ -2.18
RTN3O95197 Y_RNA.540-201ENST00000384638 111 ntBASIC1.44□□□□□ -2.18
RTN3O95197 MIR522-201ENST00000385071 87 ntBASIC1.44□□□□□ -2.18
RTN3O95197 SNORD41-201ENST00000386967 70 ntBASIC1.44□□□□□ -2.18
RTN3O95197 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.44□□□□□ -2.18
RTN3O95197 AC104332.1-201ENST00000440471 797 ntBASIC1.44□□□□□ -2.18
RTN3O95197 DYNLT3P2-201ENST00000442517 295 ntBASIC1.44□□□□□ -2.18
RTN3O95197 AC114811.1-201ENST00000507207 168 ntBASIC1.44□□□□□ -2.18
RTN3O95197 SNORA40.15-201ENST00000516884 107 ntBASIC1.44□□□□□ -2.18
RTN3O95197 Y_RNA.714-201ENST00000517065 90 ntBASIC1.44□□□□□ -2.18
RTN3O95197 RNU6-165P-201ENST00000517170 99 ntBASIC1.44□□□□□ -2.18
RTN3O95197 AC024405.2-202ENST00000532731 184 ntBASIC1.44□□□□□ -2.18
RTN3O95197 AL357312.1-201ENST00000603879 298 ntBASIC1.44□□□□□ -2.18
RTN3O95197 RNU4-90P-201ENST00000362773 141 ntBASIC1.43□□□□□ -2.18
RTN3O95197 RNU4-80P-201ENST00000363200 141 ntBASIC1.43□□□□□ -2.18
RTN3O95197 Y_RNA.602-201ENST00000410535 92 ntBASIC1.43□□□□□ -2.18
RTN3O95197 MLLT10P1-201ENST00000418346 262 ntBASIC1.43□□□□□ -2.18
RTN3O95197 RNU6-496P-201ENST00000516145 99 ntBASIC1.43□□□□□ -2.18
RTN3O95197 RNU7-115P-201ENST00000516433 55 ntBASIC1.43□□□□□ -2.18
RTN3O95197 AC127455.1-201ENST00000565496 145 ntBASIC1.43□□□□□ -2.18
RTN3O95197 MIR4452-201ENST00000583004 71 ntBASIC1.43□□□□□ -2.18
RTN3O95197 MIR548AY-201ENST00000617669 107 ntBASIC1.43□□□□□ -2.18
RTN3O95197 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
RTN3O95197 MIR26B-201ENST00000362251 77 ntBASIC1.42□□□□□ -2.18
RTN3O95197 Y_RNA.11-201ENST00000362375 109 ntBASIC1.42□□□□□ -2.18
RTN3O95197 Y_RNA.202-201ENST00000364083 110 ntBASIC1.42□□□□□ -2.18
RTN3O95197 RNU6-42P-201ENST00000384165 107 ntBASIC1.42□□□□□ -2.18
RTN3O95197 MIR452-201ENST00000385020 85 ntBASIC1.42□□□□□ -2.18
RTN3O95197 RNU6-131P-201ENST00000391144 107 ntBASIC1.42□□□□□ -2.18
RTN3O95197 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.42□□□□□ -2.18
RTN3O95197 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.42□□□□□ -2.18
RTN3O95197 AC117454.1-201ENST00000491120 168 ntBASIC1.42□□□□□ -2.18
RTN3O95197 RPL23AP54-201ENST00000495129 419 ntBASIC1.42□□□□□ -2.18
RTN3O95197 RNA5SP61-201ENST00000516453 100 ntBASIC1.42□□□□□ -2.18
RTN3O95197 AC136628.3-201ENST00000521868 290 ntBASIC1.42□□□□□ -2.18
RTN3O95197 AL355297.3-201ENST00000604082 446 ntBASIC1.42□□□□□ -2.18
RTN3O95197 AL157834.3-201ENST00000615543 103 ntBASIC1.42□□□□□ -2.18
RTN3O95197 RMST_2.1-201ENST00000617263 136 ntBASIC1.42□□□□□ -2.18
RTN3O95197 AL353770.2-201ENST00000620024 78 ntBASIC1.42□□□□□ -2.18
RTN3O95197 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.42□□□□□ -2.18
RTN3O95197 RNU6-1084P-201ENST00000362498 107 ntBASIC1.41□□□□□ -2.18
RTN3O95197 U8.7-201ENST00000364940 136 ntBASIC1.41□□□□□ -2.18
RTN3O95197 MIR526A1-201ENST00000384897 85 ntBASIC1.41□□□□□ -2.18
RTN3O95197 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.41□□□□□ -2.18
RTN3O95197 SNRPGP10-201ENST00000432323 225 ntBASIC1.41□□□□□ -2.18
RTN3O95197 HSPE1P25-201ENST00000455484 251 ntBASIC1.41□□□□□ -2.18
RTN3O95197 Y_RNA.701-201ENST00000516812 110 ntBASIC1.41□□□□□ -2.18
RTN3O95197 RNA5SP480-201ENST00000516840 109 ntBASIC1.41□□□□□ -2.18
RTN3O95197 RNA5SP102-201ENST00000516865 106 ntBASIC1.41□□□□□ -2.18
RTN3O95197 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.41□□□□□ -2.18
RTN3O95197 AL356055.1-201ENST00000602528 446 ntBASIC1.41□□□□□ -2.18
RTN3O95197 AL078603.1-201ENST00000603824 313 ntBASIC1.41□□□□□ -2.18
RTN3O95197 MIR6734-201ENST00000621166 68 ntBASIC1.41□□□□□ -2.18
RTN3O95197 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
RTN3O95197 Y_RNA.136-201ENST00000363444 102 ntBASIC1.4□□□□□ -2.19
RTN3O95197 Y_RNA.203-201ENST00000364106 102 ntBASIC1.4□□□□□ -2.19
RTN3O95197 Y_RNA.216-201ENST00000364205 93 ntBASIC1.4□□□□□ -2.19
RTN3O95197 Y_RNA.276-201ENST00000364732 109 ntBASIC1.4□□□□□ -2.19
RTN3O95197 snoU2-30.1-201ENST00000365012 70 ntBASIC1.4□□□□□ -2.19
RTN3O95197 Y_RNA.418-201ENST00000384029 102 ntBASIC1.4□□□□□ -2.19
RTN3O95197 RNU6-102P-201ENST00000384485 104 ntBASIC1.4□□□□□ -2.19
RTN3O95197 Y_RNA.527-201ENST00000384573 102 ntBASIC1.4□□□□□ -2.19
RTN3O95197 Y_RNA.581-201ENST00000391017 97 ntBASIC1.4□□□□□ -2.19
RTN3O95197 HMGN2P32-201ENST00000444648 269 ntBASIC1.4□□□□□ -2.19
RTN3O95197 RNU1-123P-201ENST00000458950 160 ntBASIC1.4□□□□□ -2.19
RTN3O95197 AC131281.1-201ENST00000522984 164 ntBASIC1.4□□□□□ -2.19
RTN3O95197 AC019288.1-201ENST00000557918 224 ntBASIC1.4□□□□□ -2.19
RTN3O95197 AC113195.1-201ENST00000579952 141 ntBASIC1.4□□□□□ -2.19
RTN3O95197 MIR4680-201ENST00000580906 66 ntBASIC1.4□□□□□ -2.19
RTN3O95197 FAM106DP-201ENST00000586416 501 ntBASIC1.4□□□□□ -2.19
RTN3O95197 RNA5SP327-201ENST00000362494 101 ntBASIC1.39□□□□□ -2.19
RTN3O95197 Y_RNA.152-201ENST00000363578 100 ntBASIC1.39□□□□□ -2.19
RTN3O95197 SNORA72.4-201ENST00000384174 132 ntBASIC1.39□□□□□ -2.19
RTN3O95197 Y_RNA.569-201ENST00000384749 103 ntBASIC1.39□□□□□ -2.19
RTN3O95197 AC015922.2-201ENST00000435593 184 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 243.4 ms