Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 RNU4-54P-201ENST00000516428 129 ntBASIC0.49□□□□□ -2.33
SEMA3DO95025 RNU6-264P-201ENST00000517134 104 ntBASIC0.49□□□□□ -2.33
SEMA3DO95025 AC036111.3-201ENST00000526389 112 ntBASIC0.49□□□□□ -2.33
SEMA3DO95025 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.49□□□□□ -2.33
SEMA3DO95025 RNU6-654P-201ENST00000364373 107 ntBASIC0.48□□□□□ -2.33
SEMA3DO95025 RNU6-708P-201ENST00000384217 107 ntBASIC0.48□□□□□ -2.33
SEMA3DO95025 RNU6-342P-201ENST00000384521 104 ntBASIC0.48□□□□□ -2.33
SEMA3DO95025 RNU6-131P-201ENST00000391144 107 ntBASIC0.48□□□□□ -2.33
SEMA3DO95025 SNORA75.6-201ENST00000391318 127 ntBASIC0.48□□□□□ -2.33
SEMA3DO95025 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.48□□□□□ -2.33
SEMA3DO95025 RNU7-43P-201ENST00000516554 64 ntBASIC0.48□□□□□ -2.33
SEMA3DO95025 AC022616.4-201ENST00000522985 181 ntBASIC0.48□□□□□ -2.33
SEMA3DO95025 MIR4659A-201ENST00000580269 81 ntBASIC0.48□□□□□ -2.33
SEMA3DO95025 AL512605.2-201ENST00000592972 256 ntBASIC0.48□□□□□ -2.33
SEMA3DO95025 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.48□□□□□ -2.33
SEMA3DO95025 PVT1_3.1-201ENST00000620853 95 ntBASIC0.48□□□□□ -2.33
SEMA3DO95025 MIR6513-201ENST00000621188 64 ntBASIC0.48□□□□□ -2.33
SEMA3DO95025 RNU6-845P-201ENST00000362578 103 ntBASIC0.47□□□□□ -2.33
SEMA3DO95025 Y_RNA.146-201ENST00000363549 102 ntBASIC0.47□□□□□ -2.33
SEMA3DO95025 Y_RNA.148-201ENST00000363557 117 ntBASIC0.47□□□□□ -2.33
SEMA3DO95025 RNA5SP48-201ENST00000363969 126 ntBASIC0.47□□□□□ -2.33
SEMA3DO95025 Y_RNA.329-201ENST00000365209 107 ntBASIC0.47□□□□□ -2.33
SEMA3DO95025 Y_RNA.368-201ENST00000365547 113 ntBASIC0.47□□□□□ -2.33
SEMA3DO95025 RNU6-890P-201ENST00000384121 107 ntBASIC0.47□□□□□ -2.33
SEMA3DO95025 SNORA50A-201ENST00000384225 134 ntBASIC0.47□□□□□ -2.33
SEMA3DO95025 SNORA72-201ENST00000384339 132 ntBASIC0.47□□□□□ -2.33
SEMA3DO95025 RNY3P4-201ENST00000384428 101 ntBASIC0.47□□□□□ -2.33
SEMA3DO95025 Y_RNA.540-201ENST00000384638 111 ntBASIC0.47□□□□□ -2.33
SEMA3DO95025 MIR1302-7-201ENST00000408841 72 ntBASIC0.47□□□□□ -2.33
SEMA3DO95025 PDCL2P1-201ENST00000419302 352 ntBASIC0.47□□□□□ -2.33
SEMA3DO95025 MTCO2P27-201ENST00000420740 428 ntBASIC0.47□□□□□ -2.33
SEMA3DO95025 MTND1P4-201ENST00000435196 415 ntBASIC0.47□□□□□ -2.33
SEMA3DO95025 MTND1P34-201ENST00000438556 671 ntBASIC0.47□□□□□ -2.33
SEMA3DO95025 Y_RNA.635-201ENST00000459041 101 ntBASIC0.47□□□□□ -2.33
SEMA3DO95025 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.47□□□□□ -2.33
SEMA3DO95025 Y_RNA.691-201ENST00000516611 103 ntBASIC0.47□□□□□ -2.33
SEMA3DO95025 RNA5SP480-201ENST00000516840 109 ntBASIC0.47□□□□□ -2.33
SEMA3DO95025 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.47□□□□□ -2.33
SEMA3DO95025 AC134026.1-201ENST00000623249 2239 ntBASIC0.47□□□□□ -2.33
SEMA3DO95025 RNU6-1188P-201ENST00000363795 107 ntBASIC0.46□□□□□ -2.34
SEMA3DO95025 RNA5SP499-201ENST00000363982 119 ntBASIC0.46□□□□□ -2.34
SEMA3DO95025 MIR15B-201ENST00000385045 98 ntBASIC0.46□□□□□ -2.34
SEMA3DO95025 SNORD28B-201ENST00000390993 75 ntBASIC0.46□□□□□ -2.34
SEMA3DO95025 SNORD78.2-201ENST00000391076 69 ntBASIC0.46□□□□□ -2.34
SEMA3DO95025 RNA5SP95-201ENST00000410319 137 ntBASIC0.46□□□□□ -2.34
SEMA3DO95025 Y_RNA.599-201ENST00000410489 109 ntBASIC0.46□□□□□ -2.34
SEMA3DO95025 Y_RNA.605-201ENST00000410577 105 ntBASIC0.46□□□□□ -2.34
SEMA3DO95025 FCF1P9-201ENST00000412546 282 ntBASIC0.46□□□□□ -2.34
SEMA3DO95025 AC096644.2-201ENST00000429278 159 ntBASIC0.46□□□□□ -2.34
SEMA3DO95025 AC092628.1-201ENST00000436250 252 ntBASIC0.46□□□□□ -2.34
SEMA3DO95025 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.46□□□□□ -2.34
SEMA3DO95025 AC098869.1-201ENST00000481627 292 ntBASIC0.46□□□□□ -2.34
SEMA3DO95025 PRDX4P1-201ENST00000507189 574 ntBASIC0.46□□□□□ -2.34
SEMA3DO95025 RNU7-4P-201ENST00000516961 62 ntBASIC0.46□□□□□ -2.34
SEMA3DO95025 AC144568.1-201ENST00000520139 137 ntBASIC0.46□□□□□ -2.34
SEMA3DO95025 AC025627.3-201ENST00000582078 182 ntBASIC0.46□□□□□ -2.34
SEMA3DO95025 MIR548AR-201ENST00000582191 57 ntBASIC0.46□□□□□ -2.34
SEMA3DO95025 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.46□□□□□ -2.34
SEMA3DO95025 MIR6516-201ENST00000630554 81 ntBASIC0.46□□□□□ -2.34
SEMA3DO95025 AL589743.1-201ENST00000551932 2712 ntBASIC0.46□□□□□ -2.34
SEMA3DO95025 Y_RNA.160-201ENST00000363677 92 ntBASIC0.45□□□□□ -2.34
SEMA3DO95025 SNORD111-201ENST00000408139 94 ntBASIC0.45□□□□□ -2.34
SEMA3DO95025 RNU6-855P-201ENST00000410395 104 ntBASIC0.45□□□□□ -2.34
SEMA3DO95025 RNU6-994P-201ENST00000410507 111 ntBASIC0.45□□□□□ -2.34
SEMA3DO95025 HMGN2P32-201ENST00000444648 269 ntBASIC0.45□□□□□ -2.34
SEMA3DO95025 AL392103.1-201ENST00000447000 198 ntBASIC0.45□□□□□ -2.34
SEMA3DO95025 MTCO3P10-201ENST00000455912 772 ntBASIC0.45□□□□□ -2.34
SEMA3DO95025 RNU6-470P-201ENST00000515954 104 ntBASIC0.45□□□□□ -2.34
SEMA3DO95025 RNU6-1110P-201ENST00000516462 101 ntBASIC0.45□□□□□ -2.34
SEMA3DO95025 AC093027.1-201ENST00000546698 429 ntBASIC0.45□□□□□ -2.34
SEMA3DO95025 AC018659.1-201ENST00000551083 169 ntBASIC0.45□□□□□ -2.34
SEMA3DO95025 AC012433.1-201ENST00000588916 398 ntBASIC0.45□□□□□ -2.34
SEMA3DO95025 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.45□□□□□ -2.34
SEMA3DO95025 AC008133.2-201ENST00000624540 351 ntBASIC0.45□□□□□ -2.34
SEMA3DO95025 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.45□□□□□ -2.34
SEMA3DO95025 MIR4251-201ENST00000635819 61 ntBASIC0.45□□□□□ -2.34
SEMA3DO95025 MIR5087-201ENST00000635826 76 ntBASIC0.45□□□□□ -2.34
SEMA3DO95025 TPTEP1-208ENST00000636884 213 ntBASIC0.45□□□□□ -2.34
SEMA3DO95025 SNORD114-26-201ENST00000363543 72 ntBASIC0.44□□□□□ -2.34
SEMA3DO95025 SNORD18A-201ENST00000363753 72 ntBASIC0.44□□□□□ -2.34
SEMA3DO95025 SNORD113.3-201ENST00000364630 78 ntBASIC0.44□□□□□ -2.34
SEMA3DO95025 Y_RNA.279-201ENST00000364763 95 ntBASIC0.44□□□□□ -2.34
SEMA3DO95025 Y_RNA.314-201ENST00000365114 102 ntBASIC0.44□□□□□ -2.34
SEMA3DO95025 MIR570-201ENST00000384917 97 ntBASIC0.44□□□□□ -2.34
SEMA3DO95025 RNU6-192P-201ENST00000391253 100 ntBASIC0.44□□□□□ -2.34
SEMA3DO95025 MCFD2P1-201ENST00000417812 300 ntBASIC0.44□□□□□ -2.34
SEMA3DO95025 AC244098.3-201ENST00000424803 96 ntBASIC0.44□□□□□ -2.34
SEMA3DO95025 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.44□□□□□ -2.34
SEMA3DO95025 AC067940.1-201ENST00000458411 300 ntBASIC0.44□□□□□ -2.34
SEMA3DO95025 AC011195.1-201ENST00000578177 177 ntBASIC0.44□□□□□ -2.34
SEMA3DO95025 MIR5690-201ENST00000583739 73 ntBASIC0.44□□□□□ -2.34
SEMA3DO95025 AC022441.3-201ENST00000605737 136 ntBASIC0.44□□□□□ -2.34
SEMA3DO95025 U2.1-201ENST00000618978 145 ntBASIC0.44□□□□□ -2.34
SEMA3DO95025 Y_RNA.36-201ENST00000362602 112 ntBASIC0.43□□□□□ -2.34
SEMA3DO95025 SNORD81.2-201ENST00000365153 76 ntBASIC0.43□□□□□ -2.34
SEMA3DO95025 SNORA2B-201ENST00000384583 137 ntBASIC0.43□□□□□ -2.34
SEMA3DO95025 RNU1-119P-201ENST00000391122 165 ntBASIC0.43□□□□□ -2.34
SEMA3DO95025 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
SEMA3DO95025 MTND1P2-201ENST00000430604 821 ntBASIC0.43□□□□□ -2.34
SEMA3DO95025 RNU6-1132P-201ENST00000459214 107 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms