Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 MIR1244-4-202ENST00000636813 85 ntBASIC0.34□□□□□ -2.36
NPHP4O75161 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.34□□□□□ -2.36
NPHP4O75161 Y_RNA.148-201ENST00000363557 117 ntBASIC0.33□□□□□ -2.36
NPHP4O75161 SNORD113.3-201ENST00000364630 78 ntBASIC0.33□□□□□ -2.36
NPHP4O75161 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
NPHP4O75161 SNORA2A-201ENST00000383885 135 ntBASIC0.33□□□□□ -2.36
NPHP4O75161 SNORD105-201ENST00000386910 85 ntBASIC0.33□□□□□ -2.36
NPHP4O75161 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.33□□□□□ -2.36
NPHP4O75161 RNU6-1050P-201ENST00000410388 107 ntBASIC0.33□□□□□ -2.36
NPHP4O75161 AC009161.1-201ENST00000417306 376 ntBASIC0.33□□□□□ -2.36
NPHP4O75161 AL392103.1-201ENST00000447000 198 ntBASIC0.33□□□□□ -2.36
NPHP4O75161 RPL7P42-201ENST00000481005 679 ntBASIC0.33□□□□□ -2.36
NPHP4O75161 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.33□□□□□ -2.36
NPHP4O75161 SNORA68.3-201ENST00000515906 83 ntBASIC0.33□□□□□ -2.36
NPHP4O75161 RNU2-12P-201ENST00000517216 168 ntBASIC0.33□□□□□ -2.36
NPHP4O75161 Z83818.1-201ENST00000603584 150 ntBASIC0.33□□□□□ -2.36
NPHP4O75161 AC015540.1-201ENST00000615828 501 ntBASIC0.33□□□□□ -2.36
NPHP4O75161 Y_RNA.89-201ENST00000363031 102 ntBASIC0.32□□□□□ -2.36
NPHP4O75161 RNU6-926P-201ENST00000384075 107 ntBASIC0.32□□□□□ -2.36
NPHP4O75161 SNORD116-2-201ENST00000384274 95 ntBASIC0.32□□□□□ -2.36
NPHP4O75161 SNORD116-6-201ENST00000384711 96 ntBASIC0.32□□□□□ -2.36
NPHP4O75161 MIR570-201ENST00000384917 97 ntBASIC0.32□□□□□ -2.36
NPHP4O75161 SNORD28B-201ENST00000390993 75 ntBASIC0.32□□□□□ -2.36
NPHP4O75161 AC074085.1-201ENST00000413598 418 ntBASIC0.32□□□□□ -2.36
NPHP4O75161 AC098826.2-201ENST00000452011 651 ntBASIC0.32□□□□□ -2.36
NPHP4O75161 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.32□□□□□ -2.36
NPHP4O75161 RNU7-43P-201ENST00000516554 64 ntBASIC0.32□□□□□ -2.36
NPHP4O75161 MIR548AR-201ENST00000582191 57 ntBASIC0.32□□□□□ -2.36
NPHP4O75161 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.32□□□□□ -2.36
NPHP4O75161 RNU6-1301P-201ENST00000362724 104 ntBASIC0.31□□□□□ -2.36
NPHP4O75161 Y_RNA.101-201ENST00000363154 102 ntBASIC0.31□□□□□ -2.36
NPHP4O75161 RNA5SP48-201ENST00000363969 126 ntBASIC0.31□□□□□ -2.36
NPHP4O75161 Y_RNA.361-201ENST00000365515 120 ntBASIC0.31□□□□□ -2.36
NPHP4O75161 AL031003.1-201ENST00000404229 172 ntBASIC0.31□□□□□ -2.36
NPHP4O75161 MIR1827-201ENST00000408549 66 ntBASIC0.31□□□□□ -2.36
NPHP4O75161 MTCO2P27-201ENST00000420740 428 ntBASIC0.31□□□□□ -2.36
NPHP4O75161 AL139396.1-201ENST00000421137 167 ntBASIC0.31□□□□□ -2.36
NPHP4O75161 MRPS18CP6-201ENST00000423587 223 ntBASIC0.31□□□□□ -2.36
NPHP4O75161 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.31□□□□□ -2.36
NPHP4O75161 RNU6-329P-201ENST00000459618 107 ntBASIC0.31□□□□□ -2.36
NPHP4O75161 AL136317.1-201ENST00000612653 226 ntBASIC0.31□□□□□ -2.36
NPHP4O75161 MIR4251-201ENST00000635819 61 ntBASIC0.31□□□□□ -2.36
NPHP4O75161 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
NPHP4O75161 SNORD114-7-201ENST00000362520 77 ntBASIC0.3□□□□□ -2.36
NPHP4O75161 RNY4P14-201ENST00000363656 96 ntBASIC0.3□□□□□ -2.36
NPHP4O75161 Y_RNA.194-201ENST00000363985 102 ntBASIC0.3□□□□□ -2.36
NPHP4O75161 Y_RNA.404-201ENST00000383978 102 ntBASIC0.3□□□□□ -2.36
NPHP4O75161 RNU6-1310P-201ENST00000384153 107 ntBASIC0.3□□□□□ -2.36
NPHP4O75161 MIR548F5-201ENST00000408421 86 ntBASIC0.3□□□□□ -2.36
NPHP4O75161 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.3□□□□□ -2.36
NPHP4O75161 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.3□□□□□ -2.36
NPHP4O75161 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.3□□□□□ -2.36
NPHP4O75161 SUMO1P2-201ENST00000452524 304 ntBASIC0.3□□□□□ -2.36
NPHP4O75161 RPL30P15-201ENST00000457129 321 ntBASIC0.3□□□□□ -2.36
NPHP4O75161 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.3□□□□□ -2.36
NPHP4O75161 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.3□□□□□ -2.36
NPHP4O75161 MIR4305-201ENST00000583252 102 ntBASIC0.3□□□□□ -2.36
NPHP4O75161 MIR1-1-201ENST00000362147 71 ntBASIC0.3□□□□□ -2.36
NPHP4O75161 Y_RNA.170-201ENST00000363746 110 ntBASIC0.3□□□□□ -2.36
NPHP4O75161 Y_RNA.303-201ENST00000364998 94 ntBASIC0.3□□□□□ -2.36
NPHP4O75161 Y_RNA.368-201ENST00000365547 113 ntBASIC0.3□□□□□ -2.36
NPHP4O75161 RPS3AP52-201ENST00000435639 297 ntBASIC0.3□□□□□ -2.36
NPHP4O75161 snoU13.21-201ENST00000459368 105 ntBASIC0.3□□□□□ -2.36
NPHP4O75161 RNU6-1016P-201ENST00000516689 94 ntBASIC0.3□□□□□ -2.36
NPHP4O75161 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.3□□□□□ -2.36
NPHP4O75161 RNU6-324P-201ENST00000363957 106 ntBASIC0.29□□□□□ -2.36
NPHP4O75161 snoU2-30.1-201ENST00000365012 70 ntBASIC0.29□□□□□ -2.36
NPHP4O75161 Y_RNA.549-201ENST00000384657 102 ntBASIC0.29□□□□□ -2.36
NPHP4O75161 RNU6-131P-201ENST00000391144 107 ntBASIC0.29□□□□□ -2.36
NPHP4O75161 AC015818.7-201ENST00000428754 109 ntBASIC0.29□□□□□ -2.36
NPHP4O75161 AC087499.7-201ENST00000441958 109 ntBASIC0.29□□□□□ -2.36
NPHP4O75161 MTND3P10-201ENST00000450967 341 ntBASIC0.29□□□□□ -2.36
NPHP4O75161 NDUFA4P2-201ENST00000489989 244 ntBASIC0.29□□□□□ -2.36
NPHP4O75161 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
NPHP4O75161 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.29□□□□□ -2.36
NPHP4O75161 RNU6-120P-201ENST00000516077 103 ntBASIC0.29□□□□□ -2.36
NPHP4O75161 RNU6-966P-201ENST00000516479 104 ntBASIC0.29□□□□□ -2.36
NPHP4O75161 RNU6-1012P-201ENST00000516606 109 ntBASIC0.29□□□□□ -2.36
NPHP4O75161 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.29□□□□□ -2.36
NPHP4O75161 Y_RNA.9-201ENST00000362354 101 ntBASIC0.28□□□□□ -2.37
NPHP4O75161 Y_RNA.157-201ENST00000363638 102 ntBASIC0.28□□□□□ -2.37
NPHP4O75161 RNU6-99P-201ENST00000364721 107 ntBASIC0.28□□□□□ -2.37
NPHP4O75161 RNU6-767P-201ENST00000384132 107 ntBASIC0.28□□□□□ -2.37
NPHP4O75161 MIR181A1-201ENST00000385026 110 ntBASIC0.28□□□□□ -2.37
NPHP4O75161 Z95118.1-201ENST00000421372 247 ntBASIC0.28□□□□□ -2.37
NPHP4O75161 AC006380.1-201ENST00000603598 186 ntBASIC0.28□□□□□ -2.37
NPHP4O75161 AC005972.2-201ENST00000604690 348 ntBASIC0.28□□□□□ -2.37
NPHP4O75161 RNU6-369P-201ENST00000362515 102 ntBASIC0.27□□□□□ -2.37
NPHP4O75161 Y_RNA.450-201ENST00000384198 113 ntBASIC0.27□□□□□ -2.37
NPHP4O75161 MIR140-201ENST00000385282 100 ntBASIC0.27□□□□□ -2.37
NPHP4O75161 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.27□□□□□ -2.37
NPHP4O75161 MIR2053-201ENST00000459295 91 ntBASIC0.27□□□□□ -2.37
NPHP4O75161 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
NPHP4O75161 Y_RNA.708-201ENST00000516950 96 ntBASIC0.27□□□□□ -2.37
NPHP4O75161 AL355073.2-201ENST00000612106 557 ntBASIC0.27□□□□□ -2.37
NPHP4O75161 AC092794.2-201ENST00000620933 563 ntBASIC0.27□□□□□ -2.37
NPHP4O75161 RNU6-601P-201ENST00000384540 107 ntBASIC0.26□□□□□ -2.37
NPHP4O75161 MIR15B-201ENST00000385045 98 ntBASIC0.26□□□□□ -2.37
NPHP4O75161 MIR548K-201ENST00000408406 116 ntBASIC0.26□□□□□ -2.37
NPHP4O75161 RNU6-1199P-201ENST00000411249 104 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms