Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF40O75150 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.81□□□□□ -1.8
RNF40O75150 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RNF40O75150 SNORD115-34-201ENST00000362441 82 ntBASIC3.81□□□□□ -1.8
RNF40O75150 SNORD115-12-201ENST00000362583 82 ntBASIC3.81□□□□□ -1.8
RNF40O75150 SNORD115-29-201ENST00000362834 82 ntBASIC3.81□□□□□ -1.8
RNF40O75150 SNORD115-9-201ENST00000362912 82 ntBASIC3.81□□□□□ -1.8
RNF40O75150 SNORD115-21-201ENST00000362963 81 ntBASIC3.81□□□□□ -1.8
RNF40O75150 SNORD115-14-201ENST00000363090 81 ntBASIC3.81□□□□□ -1.8
RNF40O75150 SNORD115-41-201ENST00000363608 82 ntBASIC3.81□□□□□ -1.8
RNF40O75150 SNORD115-11-201ENST00000363616 82 ntBASIC3.81□□□□□ -1.8
RNF40O75150 SNORD115-5-201ENST00000363633 82 ntBASIC3.81□□□□□ -1.8
RNF40O75150 SNORD115-39-201ENST00000363694 82 ntBASIC3.81□□□□□ -1.8
RNF40O75150 SNORD115-4-201ENST00000363810 82 ntBASIC3.81□□□□□ -1.8
RNF40O75150 SNORD115-6-201ENST00000363942 82 ntBASIC3.81□□□□□ -1.8
RNF40O75150 SNORD115-42-201ENST00000364273 82 ntBASIC3.81□□□□□ -1.8
RNF40O75150 SNORD115-15-201ENST00000364809 81 ntBASIC3.81□□□□□ -1.8
RNF40O75150 SNORD115-26-201ENST00000365067 82 ntBASIC3.81□□□□□ -1.8
RNF40O75150 SNORD115-10-201ENST00000365073 81 ntBASIC3.81□□□□□ -1.8
RNF40O75150 SNORD115-43-201ENST00000365503 82 ntBASIC3.81□□□□□ -1.8
RNF40O75150 SNORD115-36-201ENST00000365629 82 ntBASIC3.81□□□□□ -1.8
RNF40O75150 SNORA8-201ENST00000384574 139 ntBASIC3.81□□□□□ -1.8
RNF40O75150 AC024995.1-201ENST00000523014 93 ntBASIC3.81□□□□□ -1.8
RNF40O75150 AC090821.2-201ENST00000523552 176 ntBASIC3.81□□□□□ -1.8
RNF40O75150 MIR548AE2-201ENST00000583456 67 ntBASIC3.81□□□□□ -1.8
RNF40O75150 MIR4712-201ENST00000583750 82 ntBASIC3.81□□□□□ -1.8
RNF40O75150 ELOCP29-201ENST00000588193 334 ntBASIC3.81□□□□□ -1.8
RNF40O75150 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF40O75150 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RNF40O75150 RNA5SP42-201ENST00000364278 115 ntBASIC3.8□□□□□ -1.8
RNF40O75150 RNU6-1229P-201ENST00000364295 107 ntBASIC3.8□□□□□ -1.8
RNF40O75150 Y_RNA.470-201ENST00000384307 117 ntBASIC3.8□□□□□ -1.8
RNF40O75150 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF40O75150 AC069257.2-201ENST00000441819 155 ntBASIC3.8□□□□□ -1.8
RNF40O75150 SCARNA13-201ENST00000516672 275 ntBASIC3.8□□□□□ -1.8
RNF40O75150 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF40O75150 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF40O75150 Y_RNA.241-201ENST00000364470 117 ntBASIC3.79□□□□□ -1.8
RNF40O75150 MIR490-201ENST00000384865 128 ntBASIC3.79□□□□□ -1.8
RNF40O75150 MIR515-2-201ENST00000384883 83 ntBASIC3.79□□□□□ -1.8
RNF40O75150 MIR515-1-201ENST00000384884 83 ntBASIC3.79□□□□□ -1.8
RNF40O75150 RNA5SP293-201ENST00000410527 113 ntBASIC3.79□□□□□ -1.8
RNF40O75150 AC090844.1-201ENST00000422019 156 ntBASIC3.79□□□□□ -1.8
RNF40O75150 AL161788.1-201ENST00000441805 169 ntBASIC3.79□□□□□ -1.8
RNF40O75150 AL135938.1-201ENST00000443141 297 ntBASIC3.79□□□□□ -1.8
RNF40O75150 SNORD105B-201ENST00000458770 79 ntBASIC3.79□□□□□ -1.8
RNF40O75150 RNU7-113P-201ENST00000459273 62 ntBASIC3.79□□□□□ -1.8
RNF40O75150 AL163195.1-201ENST00000496941 348 ntBASIC3.79□□□□□ -1.8
RNF40O75150 RN7SKP57-201ENST00000517248 293 ntBASIC3.79□□□□□ -1.8
RNF40O75150 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.79□□□□□ -1.8
RNF40O75150 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.79□□□□□ -1.8
RNF40O75150 SNORA62.6-201ENST00000606322 83 ntBASIC3.79□□□□□ -1.8
RNF40O75150 MIR376B-201ENST00000614515 100 ntBASIC3.79□□□□□ -1.8
RNF40O75150 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.79□□□□□ -1.8
RNF40O75150 MIR7157-201ENST00000635801 60 ntBASIC3.79□□□□□ -1.8
RNF40O75150 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF40O75150 RNU6-805P-201ENST00000365643 106 ntBASIC3.78□□□□□ -1.8
RNF40O75150 RNA5SP482-201ENST00000391269 118 ntBASIC3.78□□□□□ -1.8
RNF40O75150 RPS27P29-201ENST00000463110 252 ntBASIC3.78□□□□□ -1.8
RNF40O75150 TRBV12-1-201ENST00000479785 344 ntBASIC3.78□□□□□ -1.8
RNF40O75150 AC108729.3-201ENST00000513484 108 ntBASIC3.78□□□□□ -1.8
RNF40O75150 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.78□□□□□ -1.8
RNF40O75150 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
RNF40O75150 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.78□□□□□ -1.8
RNF40O75150 AC096720.1-201ENST00000604441 183 ntBASIC3.78□□□□□ -1.8
RNF40O75150 AC103810.6-201ENST00000606708 136 ntBASIC3.78□□□□□ -1.8
RNF40O75150 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RNF40O75150 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF40O75150 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF40O75150 MAPK10-322ENST00000641485 4530 ntBASIC3.77□□□□□ -1.81
RNF40O75150 RNA5SP50-201ENST00000363731 107 ntBASIC3.77□□□□□ -1.81
RNF40O75150 Y_RNA.247-201ENST00000364500 92 ntBASIC3.77□□□□□ -1.81
RNF40O75150 RNA5SP323-201ENST00000391094 133 ntBASIC3.77□□□□□ -1.81
RNF40O75150 FO393413.1-201ENST00000402892 195 ntBASIC3.77□□□□□ -1.81
RNF40O75150 SRIP3-201ENST00000413200 219 ntBASIC3.77□□□□□ -1.81
RNF40O75150 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.77□□□□□ -1.81
RNF40O75150 BX510359.1-201ENST00000456973 237 ntBASIC3.77□□□□□ -1.81
RNF40O75150 RNU7-45P-201ENST00000459460 63 ntBASIC3.77□□□□□ -1.81
RNF40O75150 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.77□□□□□ -1.81
RNF40O75150 ZNF861P-201ENST00000588126 639 ntBASIC3.77□□□□□ -1.81
RNF40O75150 AL356280.1-201ENST00000603614 379 ntBASIC3.77□□□□□ -1.81
RNF40O75150 AC022149.2-201ENST00000621061 203 ntBASIC3.77□□□□□ -1.81
RNF40O75150 AC110079.1-202ENST00000635213 138 ntBASIC3.77□□□□□ -1.81
RNF40O75150 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
RNF40O75150 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RNF40O75150 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RNF40O75150 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.77□□□□□ -1.81
RNF40O75150 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF40O75150 SNORD9-201ENST00000362566 104 ntBASIC3.76□□□□□ -1.81
RNF40O75150 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF40O75150 MIR592-201ENST00000384959 97 ntBASIC3.76□□□□□ -1.81
RNF40O75150 RNU6-1319P-201ENST00000390855 104 ntBASIC3.76□□□□□ -1.81
RNF40O75150 RNU6-747P-201ENST00000390928 104 ntBASIC3.76□□□□□ -1.81
RNF40O75150 SNORD77B-201ENST00000391112 67 ntBASIC3.76□□□□□ -1.81
RNF40O75150 RNU6-241P-201ENST00000391148 104 ntBASIC3.76□□□□□ -1.81
RNF40O75150 RNU6-177P-201ENST00000411257 104 ntBASIC3.76□□□□□ -1.81
RNF40O75150 Z92545.1-201ENST00000411782 234 ntBASIC3.76□□□□□ -1.81
RNF40O75150 AL606517.2-201ENST00000442855 241 ntBASIC3.76□□□□□ -1.81
RNF40O75150 AL357552.1-201ENST00000445254 415 ntBASIC3.76□□□□□ -1.81
RNF40O75150 ATP5J2P3-201ENST00000451550 258 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms