Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 Y_RNA.410-201ENST00000383992 113 ntBASIC2.57□□□□□ -2
SHOXO15266 MIR490-201ENST00000384865 128 ntBASIC2.57□□□□□ -2
SHOXO15266 RNU6-440P-201ENST00000390882 105 ntBASIC2.57□□□□□ -2
SHOXO15266 RN7SKP200-201ENST00000410564 320 ntBASIC2.57□□□□□ -2
SHOXO15266 RNU6-1064P-201ENST00000410626 104 ntBASIC2.57□□□□□ -2
SHOXO15266 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.57□□□□□ -2
SHOXO15266 RN7SL293P-201ENST00000481765 281 ntBASIC2.57□□□□□ -2
SHOXO15266 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.57□□□□□ -2
SHOXO15266 MIR8054-201ENST00000620877 86 ntBASIC2.57□□□□□ -2
SHOXO15266 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
SHOXO15266 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.57□□□□□ -2
SHOXO15266 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.56□□□□□ -2
SHOXO15266 RNU1-33P-201ENST00000364249 162 ntBASIC2.56□□□□□ -2
SHOXO15266 SNORA80E-201ENST00000384744 137 ntBASIC2.56□□□□□ -2
SHOXO15266 MIR548A2-201ENST00000384956 97 ntBASIC2.56□□□□□ -2
SHOXO15266 MIR518F-201ENST00000384973 87 ntBASIC2.56□□□□□ -2
SHOXO15266 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.56□□□□□ -2
SHOXO15266 AL606517.2-201ENST00000442855 241 ntBASIC2.56□□□□□ -2
SHOXO15266 CYCTP-201ENST00000504253 315 ntBASIC2.56□□□□□ -2
SHOXO15266 RNU6-1061P-201ENST00000516530 99 ntBASIC2.56□□□□□ -2
SHOXO15266 RNU6-113P-201ENST00000516653 101 ntBASIC2.56□□□□□ -2
SHOXO15266 RNU2-60P-201ENST00000517290 128 ntBASIC2.56□□□□□ -2
SHOXO15266 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.56□□□□□ -2
SHOXO15266 MIR5194-201ENST00000582634 120 ntBASIC2.56□□□□□ -2
SHOXO15266 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.56□□□□□ -2
SHOXO15266 AL022345.2-201ENST00000606307 135 ntBASIC2.56□□□□□ -2
SHOXO15266 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.56□□□□□ -2
SHOXO15266 MIR3914-2-201ENST00000637339 95 ntBASIC2.56□□□□□ -2
SHOXO15266 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SHOXO15266 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.56□□□□□ -2
SHOXO15266 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.56□□□□□ -2
SHOXO15266 RNU6-1325P-201ENST00000364905 105 ntBASIC2.55□□□□□ -2
SHOXO15266 RNU6-476P-201ENST00000384726 107 ntBASIC2.55□□□□□ -2
SHOXO15266 MIR597-201ENST00000384968 97 ntBASIC2.55□□□□□ -2
SHOXO15266 AL034345.1-201ENST00000407768 123 ntBASIC2.55□□□□□ -2
SHOXO15266 AL035461.1-201ENST00000421490 332 ntBASIC2.55□□□□□ -2
SHOXO15266 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.55□□□□□ -2
SHOXO15266 AL136360.1-201ENST00000503377 1900 ntBASIC2.55□□□□□ -2
SHOXO15266 RNA5SP367-201ENST00000516557 118 ntBASIC2.55□□□□□ -2
SHOXO15266 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.55□□□□□ -2
SHOXO15266 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.55□□□□□ -2
SHOXO15266 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.55□□□□□ -2
SHOXO15266 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SHOXO15266 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.55□□□□□ -2
SHOXO15266 MTND5P32-201ENST00000560711 1802 ntBASIC2.54□□□□□ -2
SHOXO15266 MIR6073-201ENST00000352083 89 ntBASIC2.54□□□□□ -2
SHOXO15266 SNORD38C-201ENST00000384381 69 ntBASIC2.54□□□□□ -2
SHOXO15266 RNU6-163P-201ENST00000384396 106 ntBASIC2.54□□□□□ -2
SHOXO15266 MIR183-201ENST00000384958 110 ntBASIC2.54□□□□□ -2
SHOXO15266 MIR518A2-201ENST00000384966 87 ntBASIC2.54□□□□□ -2
SHOXO15266 SNORD77.3-201ENST00000391113 65 ntBASIC2.54□□□□□ -2
SHOXO15266 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.54□□□□□ -2
SHOXO15266 RN7SL633P-201ENST00000488974 297 ntBASIC2.54□□□□□ -2
SHOXO15266 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.54□□□□□ -2
SHOXO15266 SNORA31.11-201ENST00000516528 139 ntBASIC2.54□□□□□ -2
SHOXO15266 RNU6-1149P-201ENST00000516810 97 ntBASIC2.54□□□□□ -2
SHOXO15266 MIR2682-201ENST00000580305 110 ntBASIC2.54□□□□□ -2
SHOXO15266 MIR5197-201ENST00000583721 112 ntBASIC2.54□□□□□ -2
SHOXO15266 MIR4658-201ENST00000584344 65 ntBASIC2.54□□□□□ -2
SHOXO15266 AC006023.1-201ENST00000603944 259 ntBASIC2.54□□□□□ -2
SHOXO15266 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.54□□□□□ -2
SHOXO15266 SNORD115-28-201ENST00000363931 81 ntBASIC2.53□□□□□ -2
SHOXO15266 RNU6-268P-201ENST00000364174 107 ntBASIC2.53□□□□□ -2
SHOXO15266 RNU6-309P-201ENST00000364573 106 ntBASIC2.53□□□□□ -2
SHOXO15266 DEFA7P-201ENST00000382676 285 ntBASIC2.53□□□□□ -2
SHOXO15266 RNU6-1189P-201ENST00000383958 107 ntBASIC2.53□□□□□ -2
SHOXO15266 RNA5SP274-201ENST00000410484 108 ntBASIC2.53□□□□□ -2
SHOXO15266 RNA5SP270-201ENST00000411361 118 ntBASIC2.53□□□□□ -2
SHOXO15266 AC006028.1-201ENST00000438379 402 ntBASIC2.53□□□□□ -2
SHOXO15266 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.53□□□□□ -2
SHOXO15266 RNA5SP402-201ENST00000517148 110 ntBASIC2.53□□□□□ -2
SHOXO15266 MIR7975-201ENST00000619350 68 ntBASIC2.53□□□□□ -2
SHOXO15266 AC027279.3-201ENST00000625055 122 ntBASIC2.53□□□□□ -2
SHOXO15266 U6.105-201ENST00000637379 88 ntBASIC2.53□□□□□ -2
SHOXO15266 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.53□□□□□ -2
SHOXO15266 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SHOXO15266 SNORD58C-201ENST00000365223 64 ntBASIC2.52□□□□□ -2.01
SHOXO15266 SNORD15B-201ENST00000384714 146 ntBASIC2.52□□□□□ -2.01
SHOXO15266 RNVU1-14-201ENST00000384770 164 ntBASIC2.52□□□□□ -2.01
SHOXO15266 MIR520A-201ENST00000384862 85 ntBASIC2.52□□□□□ -2.01
SHOXO15266 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SHOXO15266 HMGN2P39-201ENST00000398005 273 ntBASIC2.52□□□□□ -2.01
SHOXO15266 MIR1283-2-201ENST00000408621 87 ntBASIC2.52□□□□□ -2.01
SHOXO15266 HMGN2P3-201ENST00000433603 273 ntBASIC2.52□□□□□ -2.01
SHOXO15266 HMGN2P5-201ENST00000436882 273 ntBASIC2.52□□□□□ -2.01
SHOXO15266 AL021397.1-201ENST00000451806 248 ntBASIC2.52□□□□□ -2.01
SHOXO15266 RNU7-25P-201ENST00000516544 62 ntBASIC2.52□□□□□ -2.01
SHOXO15266 YPEL5P2-201ENST00000605553 359 ntBASIC2.52□□□□□ -2.01
SHOXO15266 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
SHOXO15266 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
SHOXO15266 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
SHOXO15266 SNORA63D-201ENST00000364359 132 ntBASIC2.51□□□□□ -2.01
SHOXO15266 SNORA67.1-201ENST00000364749 141 ntBASIC2.51□□□□□ -2.01
SHOXO15266 Y_RNA.346-201ENST00000365385 112 ntBASIC2.51□□□□□ -2.01
SHOXO15266 RNU6-1144P-201ENST00000384247 104 ntBASIC2.51□□□□□ -2.01
SHOXO15266 Y_RNA.525-201ENST00000384570 113 ntBASIC2.51□□□□□ -2.01
SHOXO15266 SNORA48.1-201ENST00000390879 135 ntBASIC2.51□□□□□ -2.01
SHOXO15266 SNORA40.5-201ENST00000391061 128 ntBASIC2.51□□□□□ -2.01
SHOXO15266 RNA5SP181-201ENST00000410246 98 ntBASIC2.51□□□□□ -2.01
SHOXO15266 RNU2-7P-201ENST00000410794 178 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms