Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
NPHP1O15259 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.45□□□□□ -2.18
NPHP1O15259 Y_RNA.526-201ENST00000384572 110 ntBASIC1.45□□□□□ -2.18
NPHP1O15259 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.45□□□□□ -2.18
NPHP1O15259 MIR548J-201ENST00000408833 112 ntBASIC1.45□□□□□ -2.18
NPHP1O15259 RPS29P29-201ENST00000456396 171 ntBASIC1.45□□□□□ -2.18
NPHP1O15259 SNORD116-28-201ENST00000516123 91 ntBASIC1.45□□□□□ -2.18
NPHP1O15259 RNU6-947P-201ENST00000516264 106 ntBASIC1.45□□□□□ -2.18
NPHP1O15259 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
NPHP1O15259 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.45□□□□□ -2.18
NPHP1O15259 AC011373.1-201ENST00000607270 237 ntBASIC1.45□□□□□ -2.18
NPHP1O15259 AC090971.5-201ENST00000621102 293 ntBASIC1.45□□□□□ -2.18
NPHP1O15259 AL160413.1-201ENST00000622780 310 ntBASIC1.45□□□□□ -2.18
NPHP1O15259 Y_RNA.31-201ENST00000362574 102 ntBASIC1.44□□□□□ -2.18
NPHP1O15259 Y_RNA.310-201ENST00000365063 113 ntBASIC1.44□□□□□ -2.18
NPHP1O15259 Y_RNA.439-201ENST00000384119 94 ntBASIC1.44□□□□□ -2.18
NPHP1O15259 SNORD63-201ENST00000384262 68 ntBASIC1.44□□□□□ -2.18
NPHP1O15259 Y_RNA.535-201ENST00000384612 99 ntBASIC1.44□□□□□ -2.18
NPHP1O15259 MIR222-201ENST00000384992 110 ntBASIC1.44□□□□□ -2.18
NPHP1O15259 MIR522-201ENST00000385071 87 ntBASIC1.44□□□□□ -2.18
NPHP1O15259 MIR1302-11-201ENST00000408051 138 ntBASIC1.44□□□□□ -2.18
NPHP1O15259 MIR1302-9-201ENST00000408365 138 ntBASIC1.44□□□□□ -2.18
NPHP1O15259 MIR1302-10-201ENST00000408734 138 ntBASIC1.44□□□□□ -2.18
NPHP1O15259 MTND4P19-201ENST00000446659 478 ntBASIC1.44□□□□□ -2.18
NPHP1O15259 U8.20-201ENST00000459445 131 ntBASIC1.44□□□□□ -2.18
NPHP1O15259 RNU7-40P-201ENST00000516397 64 ntBASIC1.44□□□□□ -2.18
NPHP1O15259 RNU6-113P-201ENST00000516653 101 ntBASIC1.44□□□□□ -2.18
NPHP1O15259 RNU7-110P-201ENST00000516891 62 ntBASIC1.44□□□□□ -2.18
NPHP1O15259 SNORA70.22-201ENST00000517160 124 ntBASIC1.44□□□□□ -2.18
NPHP1O15259 DEFB117-201ENST00000602356 141 ntBASIC1.44□□□□□ -2.18
NPHP1O15259 MIR1302-2-201ENST00000607096 138 ntBASIC1.44□□□□□ -2.18
NPHP1O15259 AC091812.1-201ENST00000432235 1948 ntBASIC1.44□□□□□ -2.18
NPHP1O15259 RNU4-50P-201ENST00000364361 141 ntBASIC1.43□□□□□ -2.18
NPHP1O15259 Y_RNA.813-201ENST00000364639 102 ntBASIC1.43□□□□□ -2.18
NPHP1O15259 Y_RNA.336-201ENST00000365307 109 ntBASIC1.43□□□□□ -2.18
NPHP1O15259 Y_RNA.341-201ENST00000365341 102 ntBASIC1.43□□□□□ -2.18
NPHP1O15259 Y_RNA.368-201ENST00000365547 113 ntBASIC1.43□□□□□ -2.18
NPHP1O15259 RNU6-1323P-201ENST00000384025 107 ntBASIC1.43□□□□□ -2.18
NPHP1O15259 Y_RNA.460-201ENST00000384255 102 ntBASIC1.43□□□□□ -2.18
NPHP1O15259 RNU6-937P-201ENST00000384325 106 ntBASIC1.43□□□□□ -2.18
NPHP1O15259 RNU6-939P-201ENST00000384634 107 ntBASIC1.43□□□□□ -2.18
NPHP1O15259 Y_RNA.551-201ENST00000384661 102 ntBASIC1.43□□□□□ -2.18
NPHP1O15259 RNU6-910P-201ENST00000390844 107 ntBASIC1.43□□□□□ -2.18
NPHP1O15259 RNU6-308P-201ENST00000390957 107 ntBASIC1.43□□□□□ -2.18
NPHP1O15259 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.43□□□□□ -2.18
NPHP1O15259 PMCHL1-202ENST00000423102 261 ntBASIC1.43□□□□□ -2.18
NPHP1O15259 RPL39P39-201ENST00000455840 151 ntBASIC1.43□□□□□ -2.18
NPHP1O15259 Y_RNA.713-201ENST00000517013 96 ntBASIC1.43□□□□□ -2.18
NPHP1O15259 AC040926.1-201ENST00000530195 238 ntBASIC1.43□□□□□ -2.18
NPHP1O15259 AC090574.1-201ENST00000623186 233 ntBASIC1.43□□□□□ -2.18
NPHP1O15259 MTND4P29-201ENST00000503122 1372 ntBASIC1.43□□□□□ -2.18
NPHP1O15259 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
NPHP1O15259 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
NPHP1O15259 RNU1-124P-201ENST00000363861 145 ntBASIC1.42□□□□□ -2.18
NPHP1O15259 Y_RNA.445-201ENST00000384168 102 ntBASIC1.42□□□□□ -2.18
NPHP1O15259 Y_RNA.456-201ENST00000384232 111 ntBASIC1.42□□□□□ -2.18
NPHP1O15259 MIR452-201ENST00000385020 85 ntBASIC1.42□□□□□ -2.18
NPHP1O15259 AL590004.1-201ENST00000405321 300 ntBASIC1.42□□□□□ -2.18
NPHP1O15259 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.42□□□□□ -2.18
NPHP1O15259 MIR1298-201ENST00000408783 112 ntBASIC1.42□□□□□ -2.18
NPHP1O15259 U8.19-201ENST00000459095 133 ntBASIC1.42□□□□□ -2.18
NPHP1O15259 AC090821.2-201ENST00000523552 176 ntBASIC1.42□□□□□ -2.18
NPHP1O15259 Y_RNA.363-201ENST00000365529 113 ntBASIC1.41□□□□□ -2.18
NPHP1O15259 SNORD14.1-201ENST00000365609 90 ntBASIC1.41□□□□□ -2.18
NPHP1O15259 Y_RNA.394-201ENST00000383942 103 ntBASIC1.41□□□□□ -2.18
NPHP1O15259 SNORA70.7-201ENST00000384159 133 ntBASIC1.41□□□□□ -2.18
NPHP1O15259 RNU6-474P-201ENST00000384243 107 ntBASIC1.41□□□□□ -2.18
NPHP1O15259 Y_RNA.471-201ENST00000384312 102 ntBASIC1.41□□□□□ -2.18
NPHP1O15259 MIR598-201ENST00000384868 97 ntBASIC1.41□□□□□ -2.18
NPHP1O15259 RNU4-30P-201ENST00000410245 143 ntBASIC1.41□□□□□ -2.18
NPHP1O15259 LINC01399-202ENST00000458450 244 ntBASIC1.41□□□□□ -2.18
NPHP1O15259 PART1_1.1-201ENST00000611761 217 ntBASIC1.41□□□□□ -2.18
NPHP1O15259 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
NPHP1O15259 Y_RNA.143-201ENST00000363520 106 ntBASIC1.4□□□□□ -2.19
NPHP1O15259 RNU6-130P-201ENST00000411112 103 ntBASIC1.4□□□□□ -2.19
NPHP1O15259 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.4□□□□□ -2.19
NPHP1O15259 SNORD111.1-201ENST00000516421 86 ntBASIC1.4□□□□□ -2.19
NPHP1O15259 RNU7-116P-201ENST00000516940 62 ntBASIC1.4□□□□□ -2.19
NPHP1O15259 AL096861.1-201ENST00000610899 123 ntBASIC1.4□□□□□ -2.19
NPHP1O15259 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.4□□□□□ -2.19
NPHP1O15259 MIR6767-201ENST00000637302 66 ntBASIC1.4□□□□□ -2.19
NPHP1O15259 Y_RNA.354-201ENST00000365448 111 ntBASIC1.39□□□□□ -2.19
NPHP1O15259 AC117470.1-201ENST00000381974 330 ntBASIC1.39□□□□□ -2.19
NPHP1O15259 Y_RNA.540-201ENST00000384638 111 ntBASIC1.39□□□□□ -2.19
NPHP1O15259 Y_RNA.645-201ENST00000391229 102 ntBASIC1.39□□□□□ -2.19
NPHP1O15259 MLLT10P1-201ENST00000418346 262 ntBASIC1.39□□□□□ -2.19
NPHP1O15259 AC024067.1-201ENST00000426199 223 ntBASIC1.39□□□□□ -2.19
NPHP1O15259 AC015922.2-201ENST00000435593 184 ntBASIC1.39□□□□□ -2.19
NPHP1O15259 HMGN1P10-201ENST00000474557 553 ntBASIC1.39□□□□□ -2.19
NPHP1O15259 AC010655.3-201ENST00000478818 450 ntBASIC1.39□□□□□ -2.19
NPHP1O15259 SNORD45.4-201ENST00000516629 73 ntBASIC1.39□□□□□ -2.19
NPHP1O15259 MIR3145-201ENST00000580727 82 ntBASIC1.39□□□□□ -2.19
NPHP1O15259 AP003357.1-201ENST00000604497 148 ntBASIC1.39□□□□□ -2.19
NPHP1O15259 Y_RNA.28-201ENST00000362554 111 ntBASIC1.38□□□□□ -2.19
NPHP1O15259 RNU6-797P-201ENST00000363101 109 ntBASIC1.38□□□□□ -2.19
NPHP1O15259 Y_RNA.148-201ENST00000363557 117 ntBASIC1.38□□□□□ -2.19
NPHP1O15259 RNU6-21P-201ENST00000384710 107 ntBASIC1.38□□□□□ -2.19
NPHP1O15259 MIR19B1-201ENST00000384829 87 ntBASIC1.38□□□□□ -2.19
NPHP1O15259 SNRPGP10-201ENST00000432323 225 ntBASIC1.38□□□□□ -2.19
NPHP1O15259 Y_RNA.631-201ENST00000459607 101 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms